Gene annotation
Transcriptome id Sobic.008G088830.1
Synonym -
Functional annotation -
UniProt C6JRN0 , C6JRN1 , A0A109NDT1
Pfam PF12695
Panther DB PTHR12277 PTHR12277:SF42
NCBI CDD KOG1552; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24760 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g18860.1 : OsPOP23 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a004107
Brachypodium KQJ91670 , KQJ91669 , PNT65227 , PNT65226
Barley -
Wheat -
Populus PNT01161


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
2 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
3 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
4 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
5 Sobic.003G400100 leaf senescence related protein, putative, expressed -
6 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
7 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
9 Sobic.006G280600 tubulin folding cofactor B, putative, expressed K17262: TBCB, CKAP1, tubulin-specific chaperone B
10 Sobic.010G269100 zinc finger family protein, putative, expressed -
11 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.002G131900 expressed protein -
14 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
15 Sobic.002G392700 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
16 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
17 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
19 Sobic.006G281000 methyltransferase, putative, expressed -
20 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1


Gene co-expression network
sample Sobic008G088830 Sobic008G088830 Sobic001G230100 Sobic001G230100 Sobic008G088830--Sobic001G230100 Sobic006G281500 Sobic006G281500 Sobic008G088830--Sobic006G281500 Sobic004G132300 Sobic004G132300 Sobic008G088830--Sobic004G132300 Sobic010G002400 Sobic010G002400 Sobic008G088830--Sobic010G002400 Sobic003G400100 Sobic003G400100 Sobic008G088830--Sobic003G400100 Sobic003G273600 Sobic003G273600 Sobic008G088830--Sobic003G273600 Sobic001G338400 Sobic001G338400 Sobic008G088830--Sobic001G338400 Sobic004G082900 Sobic004G082900 Sobic008G088830--Sobic004G082900 Sobic006G280600 Sobic006G280600 Sobic008G088830--Sobic006G280600 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic003G348800 Sobic003G348800 Sobic001G230100--Sobic003G348800 Sobic001G007600 Sobic001G007600 Sobic001G230100--Sobic001G007600 Sobic001G230100--Sobic008G088830 Sobic009G229300 Sobic009G229300 Sobic001G230100--Sobic009G229300 Sobic001G281900 Sobic001G281900 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic001G230100--Sobic004G082900 Sobic001G263000 Sobic001G263000 Sobic006G281500--Sobic001G263000 Sobic009G227900 Sobic009G227900 Sobic006G281500--Sobic009G227900 Sobic009G081500 Sobic009G081500 Sobic006G281500--Sobic009G081500 Sobic002G317300 Sobic002G317300 Sobic006G281500--Sobic002G317300 Sobic005G105500 Sobic005G105500 Sobic006G281500--Sobic005G105500 Sobic002G259400 Sobic002G259400 Sobic006G281500--Sobic002G259400 Sobic007G188600 Sobic007G188600 Sobic006G281500--Sobic007G188600 Sobic003G119400 Sobic003G119400 Sobic006G281500--Sobic003G119400 Sobic010G085200 Sobic010G085200 Sobic006G281500--Sobic010G085200 Sobic001G283200 Sobic001G283200 Sobic004G132300--Sobic001G283200 Sobic001G033500 Sobic001G033500 Sobic004G132300--Sobic001G033500 Sobic006G217700 Sobic006G217700 Sobic004G132300--Sobic006G217700 Sobic001G206900 Sobic001G206900 Sobic004G132300--Sobic001G206900 Sobic006G148200 Sobic006G148200 Sobic004G132300--Sobic006G148200 Sobic001G237500 Sobic001G237500 Sobic004G132300--Sobic001G237500 Sobic002G294200 Sobic002G294200 Sobic004G132300--Sobic002G294200 Sobic004G274400 Sobic004G274400 Sobic004G132300--Sobic004G274400 Sobic006G034000 Sobic006G034000 Sobic004G132300--Sobic006G034000 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G193900 Sobic010G193900 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic003G012200 Sobic003G012200 Sobic010G002400--Sobic003G012200 Sobic006G176600 Sobic006G176600 Sobic010G002400--Sobic006G176600 Sobic006G034800 Sobic006G034800 Sobic003G400100--Sobic006G034800 Sobic001G261456 Sobic001G261456 Sobic003G400100--Sobic001G261456 Sobic002G131900 Sobic002G131900 Sobic003G400100--Sobic002G131900 Sobic002G313500 Sobic002G313500 Sobic003G400100--Sobic002G313500 Sobic010G105600 Sobic010G105600 Sobic003G400100--Sobic010G105600 Sobic001G067900 Sobic001G067900 Sobic003G400100--Sobic001G067900 Sobic009G226400 Sobic009G226400 Sobic003G400100--Sobic009G226400 Sobic001G371200 Sobic001G371200 Sobic003G400100--Sobic001G371200 Sobic010G017800 Sobic010G017800 Sobic003G400100--Sobic010G017800 Sobic002G166300 Sobic002G166300 Sobic003G273600--Sobic002G166300 Sobic003G233600 Sobic003G233600 Sobic003G273600--Sobic003G233600 Sobic001G079200 Sobic001G079200 Sobic003G273600--Sobic001G079200 Sobic009G139900 Sobic009G139900 Sobic003G273600--Sobic009G139900 Sobic004G127700 Sobic004G127700 Sobic003G273600--Sobic004G127700 Sobic008G004600 Sobic008G004600 Sobic003G273600--Sobic008G004600 Sobic004G296400 Sobic004G296400 Sobic003G273600--Sobic004G296400 Sobic003G273600--Sobic010G002400 Sobic005G044800 Sobic005G044800 Sobic003G273600--Sobic005G044800 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G338400--Sobic001G281900 Sobic001G145500 Sobic001G145500 Sobic001G338400--Sobic001G145500 Sobic004G010900 Sobic004G010900 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic006G252200 Sobic006G252200 Sobic004G082900--Sobic006G252200 Sobic004G082900--Sobic001G283200 Sobic001G458700 Sobic001G458700 Sobic004G082900--Sobic001G458700 Sobic004G082900--Sobic004G010900 Sobic007G176200 Sobic007G176200 Sobic004G082900--Sobic007G176200 Sobic004G082900--Sobic005G105500 Sobic004G082900--Sobic001G145500 Sobic009G149500 Sobic009G149500 Sobic004G082900--Sobic009G149500 Sobic001G444300 Sobic001G444300 Sobic004G082900--Sobic001G444300 Sobic005G168600 Sobic005G168600 Sobic006G280600--Sobic005G168600 Sobic004G356900 Sobic004G356900 Sobic006G280600--Sobic004G356900 Sobic006G280600--Sobic001G263000 Sobic001G085100 Sobic001G085100 Sobic006G280600--Sobic001G085100 Sobic004G232800 Sobic004G232800 Sobic006G280600--Sobic004G232800 Sobic003G239800 Sobic003G239800 Sobic006G280600--Sobic003G239800 Sobic007G188300 Sobic007G188300 Sobic006G280600--Sobic007G188300 Sobic001G078800 Sobic001G078800 Sobic006G280600--Sobic001G078800 Sobic009G238850 Sobic009G238850 Sobic006G280600--Sobic009G238850
Octagon: transcription factors


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