Gene annotation
Transcriptome id Sobic.001G067300.1,Sobic.001G067300.2,Sobic.001G067300.3,Sobic.001G067300.4
Synonym Sb01g006120, HISN8, ATHDH, HDH
Functional annotation histidinol dehydrogenase, chloroplast precursor, putative, expressed
UniProt A0A1Z5S4K9 , A0A1Z5S4N5 , A0A1Z5S4N8
Pfam PF00815
Panther DB PTHR21256 PTHR21256:SF2
NCBI CDD -
KEGG Orthology K00013; histidinol dehydrogenase
Gene Ontology GO:0008270; zinc ion binding GO:0004399histidinol dehydrogenase activity GO:0000105histidine biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G63890 : histidinol dehydrogenase
RAP-DB (Rice) LOC_Os01g13190.1 : histidinol dehydrogenase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008455
Brachypodium KQJ82454 , PNT61007 , KQK14570
Barley HORVU2Hr1G072220.10 , HORVU2Hr1G072220.9 , HORVU2Hr1G072220.8 , HORVU2Hr1G072220.1 , HORVU2Hr1G072220.3 , HORVU2Hr1G072220.2 , HORVU2Hr1G072220.5 , HORVU2Hr1G072220.4 , HORVU2Hr1G072220.7 , HORVU2Hr1G072220.6
Wheat TraesCS2A02G292100 , TraesCS2B02G308600 , TraesCS2B02G308600 , TraesCS2B02G308600 , TraesCS2D02G290100 , TraesCS2D02G290100
Populus -


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cDNA sequences
Sobic.001G067300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
2 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
3 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
4 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
5 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
6 Sobic.006G238700 C2 domain containing protein, expressed -
7 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
8 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
9 Sobic.002G116900 expressed protein -
10 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.008G088830 - -
12 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
13 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
14 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
15 Sobic.004G124100 EMB1303, putative, expressed -
16 Sobic.001G048200 elongation factor P, putative, expressed -
17 Sobic.002G039000 ML domain protein, putative, expressed -
18 Sobic.007G117500 stromal cell-derived factor 2-like protein precursor, putative, expressed -
19 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase


Gene co-expression network
sample Sobic001G067300 Sobic001G067300 Sobic004G314500 Sobic004G314500 Sobic001G067300--Sobic004G314500 Sobic001G096300 Sobic001G096300 Sobic001G067300--Sobic001G096300 Sobic009G124000 Sobic009G124000 Sobic001G067300--Sobic009G124000 Sobic004G265900 Sobic004G265900 Sobic001G067300--Sobic004G265900 Sobic001G380500 Sobic001G380500 Sobic001G067300--Sobic001G380500 Sobic006G238700 Sobic006G238700 Sobic001G067300--Sobic006G238700 Sobic001G486700 Sobic001G486700 Sobic001G067300--Sobic001G486700 Sobic006G244700 Sobic006G244700 Sobic001G067300--Sobic006G244700 Sobic002G116900 Sobic002G116900 Sobic001G067300--Sobic002G116900 Sobic004G314500--Sobic001G067300 Sobic004G314500--Sobic009G124000 Sobic004G314500--Sobic001G380500 Sobic009G029700 Sobic009G029700 Sobic004G314500--Sobic009G029700 Sobic009G093200 Sobic009G093200 Sobic004G314500--Sobic009G093200 Sobic005G140500 Sobic005G140500 Sobic004G314500--Sobic005G140500 Sobic003G309300 Sobic003G309300 Sobic004G314500--Sobic003G309300 Sobic002G301200 Sobic002G301200 Sobic004G314500--Sobic002G301200 Sobic004G314500--Sobic001G486700 Sobic003G196900 Sobic003G196900 Sobic001G096300--Sobic003G196900 Sobic010G172500 Sobic010G172500 Sobic001G096300--Sobic010G172500 Sobic006G280600 Sobic006G280600 Sobic001G096300--Sobic006G280600 Sobic001G263000 Sobic001G263000 Sobic001G096300--Sobic001G263000 Sobic007G171950 Sobic007G171950 Sobic001G096300--Sobic007G171950 Sobic001G307900 Sobic001G307900 Sobic001G096300--Sobic001G307900 Sobic001G096300--Sobic001G067300 Sobic001G464100 Sobic001G464100 Sobic001G096300--Sobic001G464100 Sobic007G095500 Sobic007G095500 Sobic001G096300--Sobic007G095500 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic009G094700 Sobic009G094700 Sobic004G265900--Sobic009G094700 Sobic004G144000 Sobic004G144000 Sobic004G265900--Sobic004G144000 Sobic003G310100 Sobic003G310100 Sobic004G265900--Sobic003G310100 Sobic008G089500 Sobic008G089500 Sobic004G265900--Sobic008G089500 Sobic003G444500 Sobic003G444500 Sobic004G265900--Sobic003G444500 Sobic003G330100 Sobic003G330100 Sobic004G265900--Sobic003G330100 Sobic005G028900 Sobic005G028900 Sobic004G265900--Sobic005G028900 Sobic010G183400 Sobic010G183400 Sobic004G265900--Sobic010G183400 Sobic008G193300 Sobic008G193300 Sobic004G265900--Sobic008G193300 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic006G238700--Sobic005G140500 Sobic006G238700--Sobic001G067300 Sobic006G280000 Sobic006G280000 Sobic006G238700--Sobic006G280000 Sobic006G073200 Sobic006G073200 Sobic006G238700--Sobic006G073200 Sobic001G279900 Sobic001G279900 Sobic006G238700--Sobic001G279900 Sobic002G350600 Sobic002G350600 Sobic006G238700--Sobic002G350600 Sobic006G238700--Sobic009G094700 Sobic008G135200 Sobic008G135200 Sobic006G238700--Sobic008G135200 Sobic001G120500 Sobic001G120500 Sobic006G238700--Sobic001G120500 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic001G486700--Sobic002G301200 Sobic001G486700--Sobic004G275600 Sobic001G468600 Sobic001G468600 Sobic001G486700--Sobic001G468600 Sobic009G072000 Sobic009G072000 Sobic001G486700--Sobic009G072000 Sobic009G045900 Sobic009G045900 Sobic001G486700--Sobic009G045900 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic005G044800 Sobic005G044800 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800 Sobic001G047400 Sobic001G047400 Sobic002G116900--Sobic001G047400 Sobic004G296400 Sobic004G296400 Sobic002G116900--Sobic004G296400 Sobic010G251000 Sobic010G251000 Sobic002G116900--Sobic010G251000 Sobic005G168600 Sobic005G168600 Sobic002G116900--Sobic005G168600 Sobic009G165800 Sobic009G165800 Sobic002G116900--Sobic009G165800 Sobic004G183600 Sobic004G183600 Sobic002G116900--Sobic004G183600 Sobic010G051300 Sobic010G051300 Sobic002G116900--Sobic010G051300 Sobic001G270400 Sobic001G270400 Sobic002G116900--Sobic001G270400 Sobic002G116900--Sobic006G244700
Octagon: transcription factors


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