Gene annotation
Transcriptome id Sobic.001G486700.1
Synonym ADSS, Sb01g045540
Functional annotation adenylosuccinate synthetase, chloroplast precursor, putative, expressed
UniProt C5WVW2 , C5WVV2
Pfam PF00709
Panther DB PTHR11846 PTHR11846:SF4
NCBI CDD -
KEGG Orthology K01939; purA, adenylosuccinate synthase
Gene Ontology GO:0006164; purine nucleotide biosynthetic process GO:0005525GTP binding GO:0004019adenylosuccinate synthase activity


Orthologs (automatic annotation)
TAIR AT3G57610 : adenylosuccinate synthase
RAP-DB (Rice) LOC_Os03g07840.1 : adenylosuccinate synthetase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000876
Brachypodium KQK23364
Barley HORVU4Hr1G075800.2 , HORVU4Hr1G075800.1 , HORVU4Hr1G005910.4 , HORVU4Hr1G005910.3 , HORVU4Hr1G005910.2 , HORVU4Hr1G005910.1
Wheat TraesCS4B02G290200 , TraesCS4D02G289300 , TraesCS4D02G289300 , TraesCS4A02G013500 , TraesCS4A02G013500
Populus -


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cDNA sequences
Sobic.001G486700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
2 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
3 Sobic.004G018000 bifunctional protein folD, putative, expressed -
4 Sobic.003G378400 DUF803 domain containing, putative, expressed -
5 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
6 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
7 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
8 Sobic.009G072000 phosphoribosylformylglycinamidine synthase, putative, expressed K01933: phosphoribosylformylglycinamidine cyclo-ligase
9 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
10 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
11 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
12 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
13 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
14 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
15 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
16 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
17 Sobic.008G183700 cbbY protein-related, putative, expressed -
18 Sobic.006G213400 bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
19 Sobic.010G103200 ThiF family domain containing protein, putative, expressed -
20 Sobic.008G038600 pyridoxal-dependent decarboxylase protein, putative, expressed K01586: diaminopimelate decarboxylase


Gene co-expression network
sample Sobic001G486700 Sobic001G486700 Sobic009G124000 Sobic009G124000 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic002G301200 Sobic002G301200 Sobic001G486700--Sobic002G301200 Sobic004G275600 Sobic004G275600 Sobic001G486700--Sobic004G275600 Sobic001G468600 Sobic001G468600 Sobic001G486700--Sobic001G468600 Sobic009G072000 Sobic009G072000 Sobic001G486700--Sobic009G072000 Sobic009G045900 Sobic009G045900 Sobic001G486700--Sobic009G045900 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic001G462200--Sobic001G486700 Sobic001G462200--Sobic003G378400 Sobic001G462200--Sobic009G124000 Sobic001G462200--Sobic004G018000 Sobic004G016400 Sobic004G016400 Sobic001G462200--Sobic004G016400 Sobic001G462200--Sobic007G208300 Sobic001G116500 Sobic001G116500 Sobic001G462200--Sobic001G116500 Sobic003G193700 Sobic003G193700 Sobic001G462200--Sobic003G193700 Sobic008G004300 Sobic008G004300 Sobic001G462200--Sobic008G004300 Sobic001G178300 Sobic001G178300 Sobic004G018000--Sobic001G178300 Sobic008G116000 Sobic008G116000 Sobic004G018000--Sobic008G116000 Sobic001G537500 Sobic001G537500 Sobic004G018000--Sobic001G537500 Sobic004G018000--Sobic001G486700 Sobic001G003100 Sobic001G003100 Sobic004G018000--Sobic001G003100 Sobic004G344000 Sobic004G344000 Sobic004G018000--Sobic004G344000 Sobic004G018000--Sobic001G462200 Sobic002G393700 Sobic002G393700 Sobic004G018000--Sobic002G393700 Sobic004G018000--Sobic001G116500 Sobic003G378400--Sobic001G462200 Sobic003G378400--Sobic001G486700 Sobic002G428800 Sobic002G428800 Sobic003G378400--Sobic002G428800 Sobic001G279900 Sobic001G279900 Sobic003G378400--Sobic001G279900 Sobic008G118900 Sobic008G118900 Sobic003G378400--Sobic008G118900 Sobic004G290000 Sobic004G290000 Sobic003G378400--Sobic004G290000 Sobic008G135200 Sobic008G135200 Sobic003G378400--Sobic008G135200 Sobic006G238700 Sobic006G238700 Sobic003G378400--Sobic006G238700 Sobic008G103800 Sobic008G103800 Sobic003G378400--Sobic008G103800 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic004G275600--Sobic001G537500 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic001G434200 Sobic001G434200 Sobic001G468600--Sobic001G434200 Sobic006G002201 Sobic006G002201 Sobic001G468600--Sobic006G002201 Sobic004G216400 Sobic004G216400 Sobic001G468600--Sobic004G216400 Sobic002G332900 Sobic002G332900 Sobic001G468600--Sobic002G332900 Sobic004G124100 Sobic004G124100 Sobic001G468600--Sobic004G124100 Sobic010G262433 Sobic010G262433 Sobic001G468600--Sobic010G262433 Sobic001G468600--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic001G468600--Sobic009G249800 Sobic006G157000 Sobic006G157000 Sobic001G468600--Sobic006G157000 Sobic009G072000--Sobic006G157000 Sobic009G072000--Sobic001G468600 Sobic003G216500 Sobic003G216500 Sobic009G072000--Sobic003G216500 Sobic009G072000--Sobic001G486700 Sobic009G072000--Sobic006G002201 Sobic009G072000--Sobic004G275600 Sobic005G105500 Sobic005G105500 Sobic009G072000--Sobic005G105500 Sobic009G072000--Sobic003G309300 Sobic006G213400 Sobic006G213400 Sobic009G072000--Sobic006G213400 Sobic009G045900--Sobic008G135200 Sobic002G047000 Sobic002G047000 Sobic009G045900--Sobic002G047000 Sobic002G246700 Sobic002G246700 Sobic009G045900--Sobic002G246700 Sobic002G408900 Sobic002G408900 Sobic009G045900--Sobic002G408900 Sobic001G090100 Sobic001G090100 Sobic009G045900--Sobic001G090100 Sobic003G314700 Sobic003G314700 Sobic009G045900--Sobic003G314700 Sobic010G206300 Sobic010G206300 Sobic009G045900--Sobic010G206300 Sobic001G248100 Sobic001G248100 Sobic009G045900--Sobic001G248100 Sobic009G045900--Sobic001G537500
Octagon: transcription factors


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