Gene annotation
Transcriptome id Sobic.010G103200.1
Synonym
Functional annotation ThiF family domain containing protein, putative, expressed
UniProt A0A194YIB1
Pfam PF00899
Panther DB PTHR10953 PTHR10953:SF135
NCBI CDD KOG2018; Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis
KEGG Orthology -
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT5G37530 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os06g14040.1 : ThiF family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042672
Brachypodium KQK18729 , KQK18730 , KQK18731 , KQK18728
Barley HORVU7Hr1G041090.20 , HORVU7Hr1G041090.22 , HORVU7Hr1G041090.23 , HORVU7Hr1G041090.24 , HORVU7Hr1G041090.25 , HORVU7Hr1G041090.9 , HORVU7Hr1G041090.8 , HORVU7Hr1G041090.1 , HORVU7Hr1G041090.3 , HORVU7Hr1G041090.2 , HORVU7Hr1G041090.4 , HORVU7Hr1G041090.7 , HORVU7Hr1G041090.6 , HORVU7Hr1G041090.19 , HORVU7Hr1G041090.18 , HORVU7Hr1G041090.15 , HORVU7Hr1G041090.14 , HORVU7Hr1G041090.17 , HORVU7Hr1G041090.16 , HORVU7Hr1G041090.11 , HORVU7Hr1G041090.10 , HORVU7Hr1G041090.13 , HORVU7Hr1G041090.12
Wheat TraesCS7B02G107200 , TraesCS7A02G200400 , TraesCS7A02G200400 , TraesCS7A02G200400 , TraesCS7D02G203400 , TraesCS7D02G203400 , TraesCS7D02G203400 , TraesCS7D02G203400 , TraesCS7B02G107200 , TraesCS7B02G107200 , TraesCS7B02G107200 , TraesCS7B02G107200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G365900 WD repeat-containing protein 12, putative, expressed K14863: WDR12, ribosome biogenesis protein
2 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
3 Sobic.006G035500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
4 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
5 Sobic.008G017200 WD domain, G-beta repeat domain containing protein, expressed K14320: aladin
6 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
7 Sobic.009G071700 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
8 Sobic.004G256000 NOL1/NOP2/sun family protein, putative, expressed K14835: 25S rRNA (cytosine2870-C5)-methyltransferase
9 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
10 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
11 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
12 Sobic.009G072000 phosphoribosylformylglycinamidine synthase, putative, expressed K01933: phosphoribosylformylglycinamidine cyclo-ligase
13 Sobic.008G169200 SRP40, C-terminal domain containing protein, expressed -
14 Sobic.004G124100 EMB1303, putative, expressed -
15 Sobic.010G142700 - -
16 Sobic.006G152000 expressed protein -
17 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
18 Sobic.001G431400 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
19 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
20 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X


Gene co-expression network
sample Sobic010G103200 Sobic010G103200 Sobic002G365900 Sobic002G365900 Sobic010G103200--Sobic002G365900 Sobic006G157000 Sobic006G157000 Sobic010G103200--Sobic006G157000 Sobic006G035500 Sobic006G035500 Sobic010G103200--Sobic006G035500 Sobic001G486700 Sobic001G486700 Sobic010G103200--Sobic001G486700 Sobic008G017200 Sobic008G017200 Sobic010G103200--Sobic008G017200 Sobic009G045900 Sobic009G045900 Sobic010G103200--Sobic009G045900 Sobic009G071700 Sobic009G071700 Sobic010G103200--Sobic009G071700 Sobic004G256000 Sobic004G256000 Sobic010G103200--Sobic004G256000 Sobic004G268100 Sobic004G268100 Sobic010G103200--Sobic004G268100 Sobic006G251600 Sobic006G251600 Sobic002G365900--Sobic006G251600 Sobic003G008600 Sobic003G008600 Sobic002G365900--Sobic003G008600 Sobic001G008500 Sobic001G008500 Sobic002G365900--Sobic001G008500 Sobic002G423500 Sobic002G423500 Sobic002G365900--Sobic002G423500 Sobic002G365900--Sobic009G071700 Sobic004G252000 Sobic004G252000 Sobic002G365900--Sobic004G252000 Sobic001G488100 Sobic001G488100 Sobic002G365900--Sobic001G488100 Sobic010G205900 Sobic010G205900 Sobic002G365900--Sobic010G205900 Sobic004G173100 Sobic004G173100 Sobic002G365900--Sobic004G173100 Sobic003G309300 Sobic003G309300 Sobic006G157000--Sobic003G309300 Sobic006G157000--Sobic009G071700 Sobic009G072000 Sobic009G072000 Sobic006G157000--Sobic009G072000 Sobic010G216300 Sobic010G216300 Sobic006G157000--Sobic010G216300 Sobic001G468600 Sobic001G468600 Sobic006G157000--Sobic001G468600 Sobic006G157000--Sobic008G017200 Sobic006G010400 Sobic006G010400 Sobic006G157000--Sobic006G010400 Sobic004G124100 Sobic004G124100 Sobic006G157000--Sobic004G124100 Sobic007G114000 Sobic007G114000 Sobic006G157000--Sobic007G114000 Sobic002G412700 Sobic002G412700 Sobic006G035500--Sobic002G412700 Sobic006G035500--Sobic007G114000 Sobic010G188000 Sobic010G188000 Sobic006G035500--Sobic010G188000 Sobic003G167900 Sobic003G167900 Sobic006G035500--Sobic003G167900 Sobic004G034700 Sobic004G034700 Sobic006G035500--Sobic004G034700 Sobic006G073200 Sobic006G073200 Sobic006G035500--Sobic006G073200 Sobic004G275600 Sobic004G275600 Sobic006G035500--Sobic004G275600 Sobic007G106700 Sobic007G106700 Sobic006G035500--Sobic007G106700 Sobic007G071900 Sobic007G071900 Sobic006G035500--Sobic007G071900 Sobic009G124000 Sobic009G124000 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic002G301200 Sobic002G301200 Sobic001G486700--Sobic002G301200 Sobic001G486700--Sobic004G275600 Sobic001G486700--Sobic001G468600 Sobic001G486700--Sobic009G072000 Sobic001G486700--Sobic009G045900 Sobic008G017200--Sobic006G157000 Sobic008G017200--Sobic001G008500 Sobic008G017200--Sobic009G071700 Sobic008G017200--Sobic010G188000 Sobic006G010000 Sobic006G010000 Sobic008G017200--Sobic006G010000 Sobic004G047200 Sobic004G047200 Sobic008G017200--Sobic004G047200 Sobic008G017200--Sobic009G045900 Sobic008G017200--Sobic002G365900 Sobic008G017200--Sobic006G251600 Sobic008G135200 Sobic008G135200 Sobic009G045900--Sobic008G135200 Sobic002G047000 Sobic002G047000 Sobic009G045900--Sobic002G047000 Sobic002G246700 Sobic002G246700 Sobic009G045900--Sobic002G246700 Sobic002G408900 Sobic002G408900 Sobic009G045900--Sobic002G408900 Sobic001G090100 Sobic001G090100 Sobic009G045900--Sobic001G090100 Sobic003G314700 Sobic003G314700 Sobic009G045900--Sobic003G314700 Sobic010G206300 Sobic010G206300 Sobic009G045900--Sobic010G206300 Sobic001G248100 Sobic001G248100 Sobic009G045900--Sobic001G248100 Sobic001G537500 Sobic001G537500 Sobic009G045900--Sobic001G537500 Sobic009G071700--Sobic006G251600 Sobic001G457200 Sobic001G457200 Sobic009G071700--Sobic001G457200 Sobic006G198600 Sobic006G198600 Sobic009G071700--Sobic006G198600 Sobic009G071700--Sobic004G173100 Sobic007G137350 Sobic007G137350 Sobic009G071700--Sobic007G137350 Sobic006G225400 Sobic006G225400 Sobic009G071700--Sobic006G225400 Sobic005G100900 Sobic005G100900 Sobic009G071700--Sobic005G100900 Sobic003G425100 Sobic003G425100 Sobic009G071700--Sobic003G425100 Sobic007G092200 Sobic007G092200 Sobic009G071700--Sobic007G092200 Sobic002G234300 Sobic002G234300 Sobic004G256000--Sobic002G234300 Sobic002G112100 Sobic002G112100 Sobic004G256000--Sobic002G112100 Sobic009G246500 Sobic009G246500 Sobic004G256000--Sobic009G246500 Sobic002G071400 Sobic002G071400 Sobic004G256000--Sobic002G071400 Sobic009G249800 Sobic009G249800 Sobic004G256000--Sobic009G249800 Sobic006G269900 Sobic006G269900 Sobic004G256000--Sobic006G269900 Sobic008G169200 Sobic008G169200 Sobic004G256000--Sobic008G169200 Sobic008G049100 Sobic008G049100 Sobic004G256000--Sobic008G049100 Sobic008G160000 Sobic008G160000 Sobic004G256000--Sobic008G160000 Sobic009G029700 Sobic009G029700 Sobic004G268100--Sobic009G029700 Sobic002G332400 Sobic002G332400 Sobic004G268100--Sobic002G332400 Sobic004G268100--Sobic009G124000 Sobic002G238000 Sobic002G238000 Sobic004G268100--Sobic002G238000 Sobic001G437200 Sobic001G437200 Sobic004G268100--Sobic001G437200 Sobic003G310100 Sobic003G310100 Sobic004G268100--Sobic003G310100 Sobic006G170200 Sobic006G170200 Sobic004G268100--Sobic006G170200 Sobic004G214400 Sobic004G214400 Sobic004G268100--Sobic004G214400 Sobic001G375000 Sobic001G375000 Sobic004G268100--Sobic001G375000
Octagon: transcription factors


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