Gene annotation
Transcriptome id Sobic.009G072000.1
Synonym Sb09g006040, ATPURM, PUR5
Functional annotation phosphoribosylformylglycinamidine synthase, putative, expressed
UniProt C5YUD2
Pfam PF00586 PF02769
Panther DB PTHR10520
NCBI CDD -
KEGG Orthology K01933; phosphoribosylformylglycinamidine cyclo-ligase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55010 : phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
RAP-DB (Rice) LOC_Os03g61600.1 : phosphoribosylformylglycinamidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a033858 , Zm00025a037533 , Zm00025a015910 , Zm00025a043180
Brachypodium KQK12330
Barley HORVU2Hr1G022400.1 , HORVU2Hr1G022400.2 , HORVU2Hr1G022400.3
Wheat TraesCS5D02G068900 , TraesCS5D02G068900 , TraesCS5B02G059100
Populus -


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cDNA sequences
Sobic.009G072000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
2 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
3 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
4 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
5 Sobic.006G002201 - -
6 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
7 Sobic.005G105500 expressed protein -
8 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
9 Sobic.006G213400 bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
10 Sobic.004G124100 EMB1303, putative, expressed -
11 Sobic.010G262433 - -
12 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
13 Sobic.007G043600 LSM domain containing protein, expressed K12621: U6 snRNA-associated Sm-like protein LSm2
14 Sobic.010G125100 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
15 Sobic.010G216300 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase
16 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
17 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
18 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
19 Sobic.004G182500 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed K18121: glyoxylate/succinic semialdehyde reductase
20 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4


Gene co-expression network
sample Sobic009G072000 Sobic009G072000 Sobic006G157000 Sobic006G157000 Sobic009G072000--Sobic006G157000 Sobic001G468600 Sobic001G468600 Sobic009G072000--Sobic001G468600 Sobic003G216500 Sobic003G216500 Sobic009G072000--Sobic003G216500 Sobic001G486700 Sobic001G486700 Sobic009G072000--Sobic001G486700 Sobic006G002201 Sobic006G002201 Sobic009G072000--Sobic006G002201 Sobic004G275600 Sobic004G275600 Sobic009G072000--Sobic004G275600 Sobic005G105500 Sobic005G105500 Sobic009G072000--Sobic005G105500 Sobic003G309300 Sobic003G309300 Sobic009G072000--Sobic003G309300 Sobic006G213400 Sobic006G213400 Sobic009G072000--Sobic006G213400 Sobic006G157000--Sobic003G309300 Sobic009G071700 Sobic009G071700 Sobic006G157000--Sobic009G071700 Sobic006G157000--Sobic009G072000 Sobic010G216300 Sobic010G216300 Sobic006G157000--Sobic010G216300 Sobic006G157000--Sobic001G468600 Sobic008G017200 Sobic008G017200 Sobic006G157000--Sobic008G017200 Sobic006G010400 Sobic006G010400 Sobic006G157000--Sobic006G010400 Sobic004G124100 Sobic004G124100 Sobic006G157000--Sobic004G124100 Sobic007G114000 Sobic007G114000 Sobic006G157000--Sobic007G114000 Sobic001G434200 Sobic001G434200 Sobic001G468600--Sobic001G434200 Sobic001G468600--Sobic006G002201 Sobic004G216400 Sobic004G216400 Sobic001G468600--Sobic004G216400 Sobic002G332900 Sobic002G332900 Sobic001G468600--Sobic002G332900 Sobic001G468600--Sobic004G124100 Sobic010G262433 Sobic010G262433 Sobic001G468600--Sobic010G262433 Sobic001G468600--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic001G468600--Sobic009G249800 Sobic001G468600--Sobic006G157000 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic002G073800 Sobic002G073800 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic009G124000 Sobic009G124000 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic002G301200 Sobic002G301200 Sobic001G486700--Sobic002G301200 Sobic001G486700--Sobic004G275600 Sobic001G486700--Sobic001G468600 Sobic001G486700--Sobic009G072000 Sobic009G045900 Sobic009G045900 Sobic001G486700--Sobic009G045900 Sobic003G103400 Sobic003G103400 Sobic006G002201--Sobic003G103400 Sobic007G061400 Sobic007G061400 Sobic006G002201--Sobic007G061400 Sobic006G002201--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G002201--Sobic004G291400 Sobic005G111900 Sobic005G111900 Sobic006G002201--Sobic005G111900 Sobic003G196800 Sobic003G196800 Sobic006G002201--Sobic003G196800 Sobic006G002201--Sobic001G468600 Sobic001G458700 Sobic001G458700 Sobic006G002201--Sobic001G458700 Sobic006G002201--Sobic004G124100 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic001G537500 Sobic001G537500 Sobic004G275600--Sobic001G537500 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic003G420900 Sobic003G420900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic001G281900 Sobic001G281900 Sobic005G105500--Sobic001G281900 Sobic005G105500--Sobic001G458700 Sobic002G341800 Sobic002G341800 Sobic005G105500--Sobic002G341800 Sobic001G145500 Sobic001G145500 Sobic005G105500--Sobic001G145500 Sobic001G096100 Sobic001G096100 Sobic005G105500--Sobic001G096100 Sobic006G211800 Sobic006G211800 Sobic005G105500--Sobic006G211800 Sobic007G176200 Sobic007G176200 Sobic005G105500--Sobic007G176200 Sobic003G330500 Sobic003G330500 Sobic005G105500--Sobic003G330500 Sobic005G105500--Sobic006G002201 Sobic003G309300--Sobic004G275600 Sobic003G309300--Sobic006G157000 Sobic003G309300--Sobic003G165101 Sobic003G309300--Sobic007G071900 Sobic008G038600 Sobic008G038600 Sobic003G309300--Sobic008G038600 Sobic006G237000 Sobic006G237000 Sobic003G309300--Sobic006G237000 Sobic003G309300--Sobic009G124000 Sobic003G309300--Sobic001G537500 Sobic003G309300--Sobic010G216300 Sobic002G231500 Sobic002G231500 Sobic006G213400--Sobic002G231500 Sobic008G190100 Sobic008G190100 Sobic006G213400--Sobic008G190100 Sobic006G213400--Sobic007G071900 Sobic006G043700 Sobic006G043700 Sobic006G213400--Sobic006G043700 Sobic008G088857 Sobic008G088857 Sobic006G213400--Sobic008G088857 Sobic006G213400--Sobic009G072000 Sobic006G213400--Sobic009G249800 Sobic006G213400--Sobic006G010400 Sobic006G213400--Sobic004G275600
Octagon: transcription factors


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