Gene annotation
Transcriptome id Sobic.010G262433.1
Synonym -
Functional annotation -
UniProt A0A1W0VUY8
Pfam PF02800
Panther DB PTHR10836 PTHR10836:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016620; oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Orthologs (automatic annotation)
TAIR AT1G79530 : glyceraldehyde-3-phosphate dehydrogenase of plastid 1
RAP-DB (Rice) LOC_Os08g03290.1 : glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a040336 , Zm00025a030211
Brachypodium KQJ94916 , KQJ94918 , KQK17032 , KQJ94926
Barley HORVU7Hr1G074690.3 , HORVU7Hr1G074690.2 , HORVU7Hr1G074690.1 , HORVU7Hr1G074690.7 , HORVU7Hr1G074690.6 , HORVU7Hr1G074690.5 , HORVU7Hr1G074690.4 , HORVU7Hr1G074690.9 , HORVU7Hr1G074690.8 , HORVU6Hr1G032070.1 , HORVU6Hr1G032070.2 , HORVU6Hr1G032070.6 , HORVU6Hr1G032070.7 , HORVU7Hr1G108580.6 , HORVU7Hr1G108580.5 , HORVU7Hr1G108580.4 , HORVU7Hr1G108580.2 , HORVU7Hr1G108580.1
Wheat TraesCS7B02G380500 , TraesCS6B02G185400 , TraesCS6D02G146900 , TraesCS7A02G478100 , TraesCS7A02G478100 , TraesCS6A02G157500 , TraesCS7A02G478100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G216400 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
2 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
3 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
4 Sobic.001G021400 elongation factor, putative, expressed K03234: elongation factor 2
5 Sobic.009G257600 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
6 Sobic.006G002201 - -
7 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
8 Sobic.002G332900 RNA recognition motif containing protein, putative, expressed -
9 Sobic.001G219300 lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
10 Sobic.009G072000 phosphoribosylformylglycinamidine synthase, putative, expressed K01933: phosphoribosylformylglycinamidine cyclo-ligase
11 Sobic.003G291500 elongation factor, putative, expressed K03234: elongation factor 2
12 Sobic.009G005900 actin, putative, expressed K10355: actin, other eukaryote
13 Sobic.001G082100 TIP41, putative, expressed K17607: TIPRL, type 2A phosphatase activator TIP41
14 Sobic.002G393500 expressed protein -
15 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
16 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
17 Sobic.003G055700 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
18 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
19 Sobic.007G061400 heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
20 Sobic.008G133600 diaminopimelate epimerase, chloroplast precursor, putative, expressed K01778: diaminopimelate epimerase


Gene co-expression network
sample Sobic010G262433 Sobic010G262433 Sobic004G216400 Sobic004G216400 Sobic010G262433--Sobic004G216400 Sobic001G468600 Sobic001G468600 Sobic010G262433--Sobic001G468600 Sobic002G071000 Sobic002G071000 Sobic010G262433--Sobic002G071000 Sobic001G021400 Sobic001G021400 Sobic010G262433--Sobic001G021400 Sobic009G257600 Sobic009G257600 Sobic010G262433--Sobic009G257600 Sobic006G002201 Sobic006G002201 Sobic010G262433--Sobic006G002201 Sobic004G310500 Sobic004G310500 Sobic010G262433--Sobic004G310500 Sobic002G332900 Sobic002G332900 Sobic010G262433--Sobic002G332900 Sobic001G219300 Sobic001G219300 Sobic010G262433--Sobic001G219300 Sobic004G216400--Sobic010G262433 Sobic004G216400--Sobic001G468600 Sobic002G341800 Sobic002G341800 Sobic004G216400--Sobic002G341800 Sobic001G283200 Sobic001G283200 Sobic004G216400--Sobic001G283200 Sobic004G216400--Sobic004G310500 Sobic001G021300 Sobic001G021300 Sobic004G216400--Sobic001G021300 Sobic009G190300 Sobic009G190300 Sobic004G216400--Sobic009G190300 Sobic004G216400--Sobic002G071000 Sobic001G082100 Sobic001G082100 Sobic004G216400--Sobic001G082100 Sobic001G434200 Sobic001G434200 Sobic001G468600--Sobic001G434200 Sobic001G468600--Sobic006G002201 Sobic001G468600--Sobic004G216400 Sobic001G468600--Sobic002G332900 Sobic004G124100 Sobic004G124100 Sobic001G468600--Sobic004G124100 Sobic001G468600--Sobic010G262433 Sobic009G072000 Sobic009G072000 Sobic001G468600--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic001G468600--Sobic009G249800 Sobic006G157000 Sobic006G157000 Sobic001G468600--Sobic006G157000 Sobic007G079300 Sobic007G079300 Sobic002G071000--Sobic007G079300 Sobic001G234200 Sobic001G234200 Sobic002G071000--Sobic001G234200 Sobic004G348900 Sobic004G348900 Sobic002G071000--Sobic004G348900 Sobic006G010000 Sobic006G010000 Sobic002G071000--Sobic006G010000 Sobic009G249100 Sobic009G249100 Sobic002G071000--Sobic009G249100 Sobic003G293300 Sobic003G293300 Sobic002G071000--Sobic003G293300 Sobic003G117300 Sobic003G117300 Sobic002G071000--Sobic003G117300 Sobic004G082900 Sobic004G082900 Sobic002G071000--Sobic004G082900 Sobic006G049700 Sobic006G049700 Sobic002G071000--Sobic006G049700 Sobic001G021400--Sobic004G216400 Sobic001G021400--Sobic010G262433 Sobic001G021400--Sobic001G468600 Sobic001G021400--Sobic002G341800 Sobic001G021400--Sobic001G283200 Sobic001G021400--Sobic001G021300 Sobic001G021400--Sobic004G310500 Sobic001G458700 Sobic001G458700 Sobic001G021400--Sobic001G458700 Sobic003G372000 Sobic003G372000 Sobic001G021400--Sobic003G372000 Sobic009G257600--Sobic001G283200 Sobic004G321900 Sobic004G321900 Sobic009G257600--Sobic004G321900 Sobic002G166900 Sobic002G166900 Sobic009G257600--Sobic002G166900 Sobic009G257600--Sobic004G310500 Sobic009G005900 Sobic009G005900 Sobic009G257600--Sobic009G005900 Sobic006G252200 Sobic006G252200 Sobic009G257600--Sobic006G252200 Sobic009G067000 Sobic009G067000 Sobic009G257600--Sobic009G067000 Sobic009G257600--Sobic004G082900 Sobic009G257600--Sobic004G216400 Sobic003G103400 Sobic003G103400 Sobic006G002201--Sobic003G103400 Sobic007G061400 Sobic007G061400 Sobic006G002201--Sobic007G061400 Sobic005G105500 Sobic005G105500 Sobic006G002201--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G002201--Sobic004G291400 Sobic005G111900 Sobic005G111900 Sobic006G002201--Sobic005G111900 Sobic003G196800 Sobic003G196800 Sobic006G002201--Sobic003G196800 Sobic006G002201--Sobic001G468600 Sobic006G002201--Sobic001G458700 Sobic006G002201--Sobic004G124100 Sobic004G194900 Sobic004G194900 Sobic004G310500--Sobic004G194900 Sobic009G075800 Sobic009G075800 Sobic004G310500--Sobic009G075800 Sobic006G044600 Sobic006G044600 Sobic004G310500--Sobic006G044600 Sobic004G310500--Sobic001G283200 Sobic004G310500--Sobic009G257600 Sobic008G156700 Sobic008G156700 Sobic004G310500--Sobic008G156700 Sobic001G512300 Sobic001G512300 Sobic004G310500--Sobic001G512300 Sobic002G394600 Sobic002G394600 Sobic004G310500--Sobic002G394600 Sobic009G222500 Sobic009G222500 Sobic004G310500--Sobic009G222500 Sobic002G332900--Sobic001G468600 Sobic004G250500 Sobic004G250500 Sobic002G332900--Sobic004G250500 Sobic002G332900--Sobic004G216400 Sobic003G239800 Sobic003G239800 Sobic002G332900--Sobic003G239800 Sobic002G332900--Sobic004G310500 Sobic002G419100 Sobic002G419100 Sobic002G332900--Sobic002G419100 Sobic002G332900--Sobic004G194900 Sobic002G332900--Sobic002G394600 Sobic002G332900--Sobic010G262433 Sobic002G111200 Sobic002G111200 Sobic001G219300--Sobic002G111200 Sobic004G080100 Sobic004G080100 Sobic001G219300--Sobic004G080100 Sobic003G055700 Sobic003G055700 Sobic001G219300--Sobic003G055700 Sobic010G049100 Sobic010G049100 Sobic001G219300--Sobic010G049100 Sobic001G219300--Sobic009G257600 Sobic001G014800 Sobic001G014800 Sobic001G219300--Sobic001G014800 Sobic001G219300--Sobic009G005900 Sobic006G244700 Sobic006G244700 Sobic001G219300--Sobic006G244700 Sobic008G032600 Sobic008G032600 Sobic001G219300--Sobic008G032600
Octagon: transcription factors


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