Gene annotation
Transcriptome id Sobic.006G002201.1
Synonym -
Functional annotation -
UniProt C5YB90
Pfam -
Panther DB PTHR12383 PTHR12383:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008236serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT2G31140 : Peptidase S24/S26A/S26B/S26C family protein
RAP-DB (Rice) LOC_Os04g01240.1 : serine-type peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a012181 , Zm00025a055518
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G103400 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
2 Sobic.007G061400 heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
3 Sobic.005G105500 expressed protein -
4 Sobic.004G291400 rho guanine nucleotide exchange factor, putative, expressed -
5 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
6 Sobic.003G196800 60S ribosomal protein L19-3, putative, expressed K02885: RP-L19e, large subunit ribosomal protein L19e
7 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
8 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
9 Sobic.004G124100 EMB1303, putative, expressed -
10 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
11 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
12 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
13 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
14 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
15 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
16 Sobic.010G205300 secreted salivary protein, putative, expressed -
17 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
18 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
19 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
20 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit


Gene co-expression network
sample Sobic006G002201 Sobic006G002201 Sobic003G103400 Sobic003G103400 Sobic006G002201--Sobic003G103400 Sobic007G061400 Sobic007G061400 Sobic006G002201--Sobic007G061400 Sobic005G105500 Sobic005G105500 Sobic006G002201--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G002201--Sobic004G291400 Sobic005G111900 Sobic005G111900 Sobic006G002201--Sobic005G111900 Sobic003G196800 Sobic003G196800 Sobic006G002201--Sobic003G196800 Sobic001G468600 Sobic001G468600 Sobic006G002201--Sobic001G468600 Sobic001G458700 Sobic001G458700 Sobic006G002201--Sobic001G458700 Sobic004G124100 Sobic004G124100 Sobic006G002201--Sobic004G124100 Sobic003G103400--Sobic006G002201 Sobic008G093200 Sobic008G093200 Sobic003G103400--Sobic008G093200 Sobic003G216500 Sobic003G216500 Sobic003G103400--Sobic003G216500 Sobic010G013900 Sobic010G013900 Sobic003G103400--Sobic010G013900 Sobic003G103400--Sobic005G105500 Sobic003G028100 Sobic003G028100 Sobic003G103400--Sobic003G028100 Sobic004G182500 Sobic004G182500 Sobic003G103400--Sobic004G182500 Sobic001G096100 Sobic001G096100 Sobic003G103400--Sobic001G096100 Sobic009G168000 Sobic009G168000 Sobic003G103400--Sobic009G168000 Sobic007G061400--Sobic006G002201 Sobic007G061400--Sobic005G111900 Sobic010G205300 Sobic010G205300 Sobic007G061400--Sobic010G205300 Sobic007G061400--Sobic003G196800 Sobic001G502200 Sobic001G502200 Sobic007G061400--Sobic001G502200 Sobic001G294900 Sobic001G294900 Sobic007G061400--Sobic001G294900 Sobic007G061400--Sobic001G458700 Sobic010G057900 Sobic010G057900 Sobic007G061400--Sobic010G057900 Sobic003G124800 Sobic003G124800 Sobic007G061400--Sobic003G124800 Sobic001G281900 Sobic001G281900 Sobic005G105500--Sobic001G281900 Sobic005G105500--Sobic001G458700 Sobic002G341800 Sobic002G341800 Sobic005G105500--Sobic002G341800 Sobic001G145500 Sobic001G145500 Sobic005G105500--Sobic001G145500 Sobic005G105500--Sobic001G096100 Sobic006G211800 Sobic006G211800 Sobic005G105500--Sobic006G211800 Sobic007G176200 Sobic007G176200 Sobic005G105500--Sobic007G176200 Sobic003G330500 Sobic003G330500 Sobic005G105500--Sobic003G330500 Sobic005G105500--Sobic006G002201 Sobic004G291400--Sobic005G105500 Sobic006G216000 Sobic006G216000 Sobic004G291400--Sobic006G216000 Sobic004G291400--Sobic006G002201 Sobic006G020900 Sobic006G020900 Sobic004G291400--Sobic006G020900 Sobic004G291400--Sobic003G196800 Sobic004G291400--Sobic004G124100 Sobic004G291400--Sobic002G341800 Sobic004G291400--Sobic005G111900 Sobic009G234400 Sobic009G234400 Sobic004G291400--Sobic009G234400 Sobic005G111900--Sobic007G061400 Sobic001G014800 Sobic001G014800 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic003G349300 Sobic003G349300 Sobic005G111900--Sobic003G349300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic009G149500 Sobic009G149500 Sobic005G111900--Sobic009G149500 Sobic005G027300 Sobic005G027300 Sobic003G196800--Sobic005G027300 Sobic009G212300 Sobic009G212300 Sobic003G196800--Sobic009G212300 Sobic003G196800--Sobic001G096100 Sobic003G196800--Sobic002G341800 Sobic001G481700 Sobic001G481700 Sobic003G196800--Sobic001G481700 Sobic010G114700 Sobic010G114700 Sobic003G196800--Sobic010G114700 Sobic003G196800--Sobic009G234400 Sobic003G196800--Sobic006G002201 Sobic003G196800--Sobic007G061400 Sobic001G434200 Sobic001G434200 Sobic001G468600--Sobic001G434200 Sobic001G468600--Sobic006G002201 Sobic004G216400 Sobic004G216400 Sobic001G468600--Sobic004G216400 Sobic002G332900 Sobic002G332900 Sobic001G468600--Sobic002G332900 Sobic001G468600--Sobic004G124100 Sobic010G262433 Sobic010G262433 Sobic001G468600--Sobic010G262433 Sobic009G072000 Sobic009G072000 Sobic001G468600--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic001G468600--Sobic009G249800 Sobic006G157000 Sobic006G157000 Sobic001G468600--Sobic006G157000 Sobic001G458700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic001G458700--Sobic003G330500 Sobic001G283200 Sobic001G283200 Sobic001G458700--Sobic001G283200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic004G124100--Sobic004G291400 Sobic004G124100--Sobic001G468600 Sobic004G124100--Sobic006G002201 Sobic004G248900 Sobic004G248900 Sobic004G124100--Sobic004G248900 Sobic006G010400 Sobic006G010400 Sobic004G124100--Sobic006G010400 Sobic004G124100--Sobic006G157000 Sobic008G118600 Sobic008G118600 Sobic004G124100--Sobic008G118600 Sobic004G124100--Sobic005G105500 Sobic008G103800 Sobic008G103800 Sobic004G124100--Sobic008G103800
Octagon: transcription factors


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