Gene annotation
Transcriptome id Sobic.003G055700.1,Sobic.003G055700.2
Synonym Sb03g004770
Functional annotation saposin-like type B, region 1 family protein, putative, expressed
UniProt A0A1B6Q1P0 , A0A1B6Q1I0
Pfam PF03489 PF05184
Panther DB PTHR11480
NCBI CDD KOG1340; Prosaposin
KEGG Orthology K12382; PSAP, saposin
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G51730 : saposin B domain-containing protein
RAP-DB (Rice) LOC_Os01g07250.1 : saposin-like type B, region 1 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023314
Brachypodium -
Barley -
Wheat TraesCS3D02G097800 , TraesCS3A02G097300
Populus -


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cDNA sequences
Sobic.003G055700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
2 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.001G219300 lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
4 Sobic.001G048200 elongation factor P, putative, expressed -
5 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
6 Sobic.008G032600 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
7 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
8 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
9 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
10 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
11 Sobic.002G393500 expressed protein -
12 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
13 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
14 Sobic.010G049100 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
15 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
16 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
17 Sobic.007G098200 - -
18 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
20 Sobic.002G116900 expressed protein -


Gene co-expression network
sample Sobic003G055700 Sobic003G055700 Sobic007G136100 Sobic007G136100 Sobic003G055700--Sobic007G136100 Sobic005G044800 Sobic005G044800 Sobic003G055700--Sobic005G044800 Sobic001G219300 Sobic001G219300 Sobic003G055700--Sobic001G219300 Sobic001G048200 Sobic001G048200 Sobic003G055700--Sobic001G048200 Sobic006G244700 Sobic006G244700 Sobic003G055700--Sobic006G244700 Sobic008G032600 Sobic008G032600 Sobic003G055700--Sobic008G032600 Sobic009G139900 Sobic009G139900 Sobic003G055700--Sobic009G139900 Sobic003G372000 Sobic003G372000 Sobic003G055700--Sobic003G372000 Sobic004G080100 Sobic004G080100 Sobic003G055700--Sobic004G080100 Sobic001G283200 Sobic001G283200 Sobic007G136100--Sobic001G283200 Sobic010G193900 Sobic010G193900 Sobic007G136100--Sobic010G193900 Sobic007G136100--Sobic003G055700 Sobic003G261400 Sobic003G261400 Sobic007G136100--Sobic003G261400 Sobic007G136100--Sobic003G372000 Sobic004G081800 Sobic004G081800 Sobic007G136100--Sobic004G081800 Sobic003G261500 Sobic003G261500 Sobic007G136100--Sobic003G261500 Sobic006G176600 Sobic006G176600 Sobic007G136100--Sobic006G176600 Sobic001G049200 Sobic001G049200 Sobic007G136100--Sobic001G049200 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G044800--Sobic003G012200 Sobic005G044800--Sobic003G372000 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic005G044800--Sobic003G055700 Sobic002G111200 Sobic002G111200 Sobic001G219300--Sobic002G111200 Sobic001G219300--Sobic004G080100 Sobic001G219300--Sobic003G055700 Sobic010G049100 Sobic010G049100 Sobic001G219300--Sobic010G049100 Sobic009G257600 Sobic009G257600 Sobic001G219300--Sobic009G257600 Sobic001G014800 Sobic001G014800 Sobic001G219300--Sobic001G014800 Sobic009G005900 Sobic009G005900 Sobic001G219300--Sobic009G005900 Sobic001G219300--Sobic006G244700 Sobic001G219300--Sobic008G032600 Sobic001G048200--Sobic006G244700 Sobic001G048200--Sobic003G055700 Sobic001G048200--Sobic002G116900 Sobic001G048200--Sobic010G049100 Sobic001G048200--Sobic008G032600 Sobic001G048200--Sobic004G080100 Sobic004G040900 Sobic004G040900 Sobic001G048200--Sobic004G040900 Sobic007G188300 Sobic007G188300 Sobic001G048200--Sobic007G188300 Sobic001G468600 Sobic001G468600 Sobic001G048200--Sobic001G468600 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic006G244700--Sobic001G048200 Sobic006G244700--Sobic005G044800 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic006G244700--Sobic004G081800 Sobic008G032600--Sobic010G049100 Sobic008G156700 Sobic008G156700 Sobic008G032600--Sobic008G156700 Sobic008G032600--Sobic004G080100 Sobic009G133600 Sobic009G133600 Sobic008G032600--Sobic009G133600 Sobic005G168600 Sobic005G168600 Sobic008G032600--Sobic005G168600 Sobic003G110400 Sobic003G110400 Sobic008G032600--Sobic003G110400 Sobic008G032600--Sobic003G055700 Sobic008G032600--Sobic006G244700 Sobic008G033500 Sobic008G033500 Sobic008G032600--Sobic008G033500 Sobic004G136300 Sobic004G136300 Sobic009G139900--Sobic004G136300 Sobic002G166300 Sobic002G166300 Sobic009G139900--Sobic002G166300 Sobic010G138000 Sobic010G138000 Sobic009G139900--Sobic010G138000 Sobic003G233600 Sobic003G233600 Sobic009G139900--Sobic003G233600 Sobic009G139900--Sobic004G127700 Sobic009G143700 Sobic009G143700 Sobic009G139900--Sobic009G143700 Sobic009G139900--Sobic003G273600 Sobic007G054800 Sobic007G054800 Sobic009G139900--Sobic007G054800 Sobic001G333100 Sobic001G333100 Sobic009G139900--Sobic001G333100 Sobic001G085100 Sobic001G085100 Sobic003G372000--Sobic001G085100 Sobic003G372000--Sobic005G044800 Sobic003G372000--Sobic003G012200 Sobic003G372000--Sobic001G283200 Sobic009G123600 Sobic009G123600 Sobic003G372000--Sobic009G123600 Sobic003G372000--Sobic004G358600 Sobic003G372000--Sobic003G261400 Sobic003G372000--Sobic006G244700 Sobic009G075800 Sobic009G075800 Sobic003G372000--Sobic009G075800 Sobic004G080100--Sobic010G049100 Sobic004G067100 Sobic004G067100 Sobic004G080100--Sobic004G067100 Sobic003G246700 Sobic003G246700 Sobic004G080100--Sobic003G246700 Sobic002G226900 Sobic002G226900 Sobic004G080100--Sobic002G226900 Sobic004G080100--Sobic001G219300 Sobic004G080100--Sobic008G032600 Sobic003G139800 Sobic003G139800 Sobic004G080100--Sobic003G139800 Sobic008G179900 Sobic008G179900 Sobic004G080100--Sobic008G179900 Sobic008G089900 Sobic008G089900 Sobic004G080100--Sobic008G089900
Octagon: transcription factors


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