Gene annotation
Transcriptome id Sobic.004G080100.1,Sobic.004G080100.2
Synonym Sb04g006620
Functional annotation fumarylacetoacetase, putative, expressed
UniProt A0A194YNE6 , A0A194YPE9
Pfam PF09298 PF01557
Panther DB PTHR11820 PTHR11820:SF1
NCBI CDD -
KEGG Orthology K01555; FAH, fumarylacetoacetase
Gene Ontology GO:0009072; aromatic amino acid family metabolic process GO:0004334fumarylacetoacetase activity GO:0008152metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G12050 : fumarylacetoacetase, putative
RAP-DB (Rice) LOC_Os02g10310.1 : fumarylacetoacetase, putative, expressed
MaizeGDB (Corn) Zm00025a019625 , Zm00025a034653
Brachypodium KQJ93864
Barley HORVU6Hr1G033350.2 , HORVU6Hr1G033350.1
Wheat TraesCS6D02G153400 , TraesCS6A02G159100 , TraesCS6B02G192200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G049100 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
2 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
3 Sobic.003G246700 iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed -
4 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
5 Sobic.001G219300 lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
6 Sobic.008G032600 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
7 Sobic.003G139800 protein kinase, putative, expressed K13436: pto-interacting protein 1
8 Sobic.008G179900 cysteine synthase, putative, expressed K01738: cysteine synthase
9 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
10 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
11 Sobic.001G203900 OsGrx_S17 - glutaredoxin subgroup II, expressed -
12 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
13 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
14 Sobic.010G116400 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
15 Sobic.003G055700 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
16 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
17 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
18 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
19 Sobic.001G048200 elongation factor P, putative, expressed -
20 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G080100 Sobic004G080100 Sobic010G049100 Sobic010G049100 Sobic004G080100--Sobic010G049100 Sobic004G067100 Sobic004G067100 Sobic004G080100--Sobic004G067100 Sobic003G246700 Sobic003G246700 Sobic004G080100--Sobic003G246700 Sobic002G226900 Sobic002G226900 Sobic004G080100--Sobic002G226900 Sobic001G219300 Sobic001G219300 Sobic004G080100--Sobic001G219300 Sobic008G032600 Sobic008G032600 Sobic004G080100--Sobic008G032600 Sobic003G139800 Sobic003G139800 Sobic004G080100--Sobic003G139800 Sobic008G179900 Sobic008G179900 Sobic004G080100--Sobic008G179900 Sobic008G089900 Sobic008G089900 Sobic004G080100--Sobic008G089900 Sobic010G049100--Sobic004G080100 Sobic010G049100--Sobic003G246700 Sobic001G014800 Sobic001G014800 Sobic010G049100--Sobic001G014800 Sobic010G049100--Sobic008G032600 Sobic004G121300 Sobic004G121300 Sobic010G049100--Sobic004G121300 Sobic010G049100--Sobic002G226900 Sobic004G296400 Sobic004G296400 Sobic010G049100--Sobic004G296400 Sobic009G139900 Sobic009G139900 Sobic010G049100--Sobic009G139900 Sobic004G136300 Sobic004G136300 Sobic010G049100--Sobic004G136300 Sobic004G067100--Sobic004G080100 Sobic004G067100--Sobic003G246700 Sobic002G166900 Sobic002G166900 Sobic004G067100--Sobic002G166900 Sobic003G117900 Sobic003G117900 Sobic004G067100--Sobic003G117900 Sobic001G508100 Sobic001G508100 Sobic004G067100--Sobic001G508100 Sobic004G167400 Sobic004G167400 Sobic004G067100--Sobic004G167400 Sobic004G067100--Sobic002G226900 Sobic006G090000 Sobic006G090000 Sobic004G067100--Sobic006G090000 Sobic003G077900 Sobic003G077900 Sobic004G067100--Sobic003G077900 Sobic003G246700--Sobic004G067100 Sobic003G246700--Sobic004G080100 Sobic003G246700--Sobic010G049100 Sobic007G068900 Sobic007G068900 Sobic003G246700--Sobic007G068900 Sobic010G000900 Sobic010G000900 Sobic003G246700--Sobic010G000900 Sobic003G246700--Sobic002G226900 Sobic010G277100 Sobic010G277100 Sobic003G246700--Sobic010G277100 Sobic007G216100 Sobic007G216100 Sobic003G246700--Sobic007G216100 Sobic003G246700--Sobic003G117900 Sobic009G075800 Sobic009G075800 Sobic002G226900--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic002G226900--Sobic004G275700 Sobic003G012200 Sobic003G012200 Sobic002G226900--Sobic003G012200 Sobic001G199100 Sobic001G199100 Sobic002G226900--Sobic001G199100 Sobic009G217100 Sobic009G217100 Sobic002G226900--Sobic009G217100 Sobic003G365300 Sobic003G365300 Sobic002G226900--Sobic003G365300 Sobic010G251000 Sobic010G251000 Sobic002G226900--Sobic010G251000 Sobic002G226900--Sobic010G000900 Sobic001G203900 Sobic001G203900 Sobic002G226900--Sobic001G203900 Sobic002G111200 Sobic002G111200 Sobic001G219300--Sobic002G111200 Sobic001G219300--Sobic004G080100 Sobic003G055700 Sobic003G055700 Sobic001G219300--Sobic003G055700 Sobic001G219300--Sobic010G049100 Sobic009G257600 Sobic009G257600 Sobic001G219300--Sobic009G257600 Sobic001G219300--Sobic001G014800 Sobic009G005900 Sobic009G005900 Sobic001G219300--Sobic009G005900 Sobic006G244700 Sobic006G244700 Sobic001G219300--Sobic006G244700 Sobic001G219300--Sobic008G032600 Sobic008G032600--Sobic010G049100 Sobic008G156700 Sobic008G156700 Sobic008G032600--Sobic008G156700 Sobic008G032600--Sobic004G080100 Sobic009G133600 Sobic009G133600 Sobic008G032600--Sobic009G133600 Sobic005G168600 Sobic005G168600 Sobic008G032600--Sobic005G168600 Sobic003G110400 Sobic003G110400 Sobic008G032600--Sobic003G110400 Sobic008G032600--Sobic003G055700 Sobic008G032600--Sobic006G244700 Sobic008G033500 Sobic008G033500 Sobic008G032600--Sobic008G033500 Sobic001G390800 Sobic001G390800 Sobic003G139800--Sobic001G390800 Sobic010G229400 Sobic010G229400 Sobic003G139800--Sobic010G229400 Sobic001G268200 Sobic001G268200 Sobic003G139800--Sobic001G268200 Sobic010G147100 Sobic010G147100 Sobic003G139800--Sobic010G147100 Sobic002G311100 Sobic002G311100 Sobic003G139800--Sobic002G311100 Sobic001G113500 Sobic001G113500 Sobic003G139800--Sobic001G113500 Sobic010G139600 Sobic010G139600 Sobic003G139800--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic003G139800--Sobic002G111000 Sobic010G131900 Sobic010G131900 Sobic003G139800--Sobic010G131900 Sobic008G179900--Sobic004G080100 Sobic004G225100 Sobic004G225100 Sobic008G179900--Sobic004G225100 Sobic004G329300 Sobic004G329300 Sobic008G179900--Sobic004G329300 Sobic008G179900--Sobic009G139900 Sobic001G462500 Sobic001G462500 Sobic008G179900--Sobic001G462500 Sobic008G179900--Sobic003G110400 Sobic008G074400 Sobic008G074400 Sobic008G179900--Sobic008G074400 Sobic001G016700 Sobic001G016700 Sobic008G179900--Sobic001G016700 Sobic008G179900--Sobic002G111000 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic004G103000 Sobic004G103000 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic001G414500 Sobic001G414500 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300
Octagon: transcription factors


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