Gene annotation
Transcriptome id Sobic.008G089900.2,Sobic.008G089900.1
Synonym Sb08g010860
Functional annotation PQ loop repeat domain containing protein, expressed
UniProt A0A1B6PCE0 , A0A1B6PCY8
Pfam PF04193
Panther DB PTHR13131 PTHR13131:SF5
NCBI CDD KOG2913; Predicted membrane protein
KEGG Orthology K12386; cystinosin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40670 : PQ-loop repeat family protein / transmembrane family protein
RAP-DB (Rice) LOC_Os12g18110.1,LOC_Os12g18110.2 : PQ loop repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054104
Brachypodium KQJ91684 , KQJ91685
Barley -
Wheat TraesCS7A02G171900 , TraesCS7B02G076700 , TraesCS7B02G076700 , TraesCS7D02G172400 , TraesCS7D02G172400
Populus -


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cDNA sequences
Sobic.008G089900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G083800 expressed protein -
2 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
3 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
4 Sobic.002G204200 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
5 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
6 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
7 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
8 Sobic.009G187400 heat shock protein, putative, expressed -
9 Sobic.009G207300 ubiquitin domain-containing protein 1, putative, expressed -
10 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
11 Sobic.001G476700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
13 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
14 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
15 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
16 Sobic.010G230500 expressed protein -
17 Sobic.009G241100 expressed protein -
18 Sobic.010G074300 smr domain containing protein, expressed -
19 Sobic.007G227700 expressed protein -
20 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1


Gene co-expression network
sample Sobic008G089900 Sobic008G089900 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic004G103000 Sobic004G103000 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic001G414500 Sobic001G414500 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300 Sobic006G083800--Sobic008G089900 Sobic006G083800--Sobic009G162600 Sobic008G081300 Sobic008G081300 Sobic006G083800--Sobic008G081300 Sobic010G013200 Sobic010G013200 Sobic006G083800--Sobic010G013200 Sobic006G083800--Sobic002G001000 Sobic001G396000 Sobic001G396000 Sobic006G083800--Sobic001G396000 Sobic006G051800 Sobic006G051800 Sobic006G083800--Sobic006G051800 Sobic004G296400 Sobic004G296400 Sobic006G083800--Sobic004G296400 Sobic001G049500 Sobic001G049500 Sobic006G083800--Sobic001G049500 Sobic003G340600 Sobic003G340600 Sobic009G162600--Sobic003G340600 Sobic002G349100 Sobic002G349100 Sobic009G162600--Sobic002G349100 Sobic009G103000 Sobic009G103000 Sobic009G162600--Sobic009G103000 Sobic002G072400 Sobic002G072400 Sobic009G162600--Sobic002G072400 Sobic002G275100 Sobic002G275100 Sobic009G162600--Sobic002G275100 Sobic003G105900 Sobic003G105900 Sobic009G162600--Sobic003G105900 Sobic009G162600--Sobic008G089900 Sobic004G300100 Sobic004G300100 Sobic009G162600--Sobic004G300100 Sobic003G029500 Sobic003G029500 Sobic009G162600--Sobic003G029500 Sobic004G103000--Sobic001G243200 Sobic006G259600 Sobic006G259600 Sobic004G103000--Sobic006G259600 Sobic008G167600 Sobic008G167600 Sobic004G103000--Sobic008G167600 Sobic001G352400 Sobic001G352400 Sobic004G103000--Sobic001G352400 Sobic001G476700 Sobic001G476700 Sobic004G103000--Sobic001G476700 Sobic004G169000 Sobic004G169000 Sobic004G103000--Sobic004G169000 Sobic010G074300 Sobic010G074300 Sobic004G103000--Sobic010G074300 Sobic001G333800 Sobic001G333800 Sobic004G103000--Sobic001G333800 Sobic005G106600 Sobic005G106600 Sobic004G103000--Sobic005G106600 Sobic002G204200--Sobic008G089900 Sobic007G216100 Sobic007G216100 Sobic002G204200--Sobic007G216100 Sobic004G017800 Sobic004G017800 Sobic002G204200--Sobic004G017800 Sobic002G226400 Sobic002G226400 Sobic002G204200--Sobic002G226400 Sobic001G406100 Sobic001G406100 Sobic002G204200--Sobic001G406100 Sobic010G230500 Sobic010G230500 Sobic002G204200--Sobic010G230500 Sobic001G070000 Sobic001G070000 Sobic002G204200--Sobic001G070000 Sobic002G204200--Sobic004G103000 Sobic003G295900 Sobic003G295900 Sobic002G204200--Sobic003G295900 Sobic007G227700 Sobic007G227700 Sobic002G001000--Sobic007G227700 Sobic002G200700 Sobic002G200700 Sobic002G001000--Sobic002G200700 Sobic004G207400 Sobic004G207400 Sobic002G001000--Sobic004G207400 Sobic010G140600 Sobic010G140600 Sobic002G001000--Sobic010G140600 Sobic001G072700 Sobic001G072700 Sobic002G001000--Sobic001G072700 Sobic002G001000--Sobic010G013200 Sobic002G001000--Sobic008G089900 Sobic003G403500 Sobic003G403500 Sobic002G001000--Sobic003G403500 Sobic003G224100 Sobic003G224100 Sobic002G001000--Sobic003G224100 Sobic001G414500--Sobic008G089900 Sobic009G219900 Sobic009G219900 Sobic001G414500--Sobic009G219900 Sobic006G261300 Sobic006G261300 Sobic001G414500--Sobic006G261300 Sobic006G092400 Sobic006G092400 Sobic001G414500--Sobic006G092400 Sobic002G217400 Sobic002G217400 Sobic001G414500--Sobic002G217400 Sobic003G077900 Sobic003G077900 Sobic001G414500--Sobic003G077900 Sobic002G290400 Sobic002G290400 Sobic001G414500--Sobic002G290400 Sobic006G090000 Sobic006G090000 Sobic001G414500--Sobic006G090000 Sobic001G503300 Sobic001G503300 Sobic001G414500--Sobic001G503300 Sobic009G093100 Sobic009G093100 Sobic001G243200--Sobic009G093100 Sobic001G243200--Sobic006G259600 Sobic006G065100 Sobic006G065100 Sobic001G243200--Sobic006G065100 Sobic001G243200--Sobic001G333800 Sobic001G133000 Sobic001G133000 Sobic001G243200--Sobic001G133000 Sobic003G166200 Sobic003G166200 Sobic001G243200--Sobic003G166200 Sobic006G219600 Sobic006G219600 Sobic001G243200--Sobic006G219600 Sobic002G129400 Sobic002G129400 Sobic001G243200--Sobic002G129400 Sobic001G077300 Sobic001G077300 Sobic001G243200--Sobic001G077300 Sobic009G187400--Sobic008G089900 Sobic009G187400--Sobic001G414500 Sobic009G187400--Sobic006G261300 Sobic001G143000 Sobic001G143000 Sobic009G187400--Sobic001G143000 Sobic003G437800 Sobic003G437800 Sobic009G187400--Sobic003G437800 Sobic009G187400--Sobic002G001000 Sobic002G072100 Sobic002G072100 Sobic009G187400--Sobic002G072100 Sobic009G187400--Sobic007G227700 Sobic001G029200 Sobic001G029200 Sobic009G187400--Sobic001G029200 Sobic009G207300--Sobic008G089900 Sobic002G128900 Sobic002G128900 Sobic009G207300--Sobic002G128900 Sobic005G062700 Sobic005G062700 Sobic009G207300--Sobic005G062700 Sobic007G079400 Sobic007G079400 Sobic009G207300--Sobic007G079400 Sobic009G207300--Sobic009G162600 Sobic008G187100 Sobic008G187100 Sobic009G207300--Sobic008G187100 Sobic001G303200 Sobic001G303200 Sobic009G207300--Sobic001G303200 Sobic003G373600 Sobic003G373600 Sobic009G207300--Sobic003G373600 Sobic004G070700 Sobic004G070700 Sobic009G207300--Sobic004G070700
Octagon: transcription factors


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