Gene annotation
Transcriptome id Sobic.009G241100.1,Sobic.009G241100.2
Synonym Sb09g029270
Functional annotation expressed protein
UniProt C5YW24 , A0A1Z5R418
Pfam -
Panther DB PTHR35716 PTHR35716:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25605 : -
RAP-DB (Rice) LOC_Os05g49910.1 : expressed protein
MaizeGDB (Corn) Zm00025a036674
Brachypodium KQK04749
Barley HORVU1Hr1G090740.20 , HORVU1Hr1G090740.1 , HORVU1Hr1G090740.19 , HORVU1Hr1G090740.18 , HORVU1Hr1G090740.10 , HORVU1Hr1G090740.13 , HORVU1Hr1G090740.12 , HORVU1Hr1G090740.14 , HORVU1Hr1G090740.17 , HORVU1Hr1G090740.9 , HORVU1Hr1G090740.5 , HORVU1Hr1G090740.4 , HORVU1Hr1G090740.7 , HORVU1Hr1G090740.6 , HORVU1Hr1G090740.2 , HORVU1Hr1G090740.8
Wheat TraesCS1D02G420800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
2 Sobic.001G104600 expressed protein -
3 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
4 Sobic.001G411100 expressed protein -
5 Sobic.007G124500 methyltransferase, putative, expressed -
6 Sobic.005G062700 nifU, putative, expressed -
7 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
8 Sobic.001G500700 expressed protein -
9 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
10 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
11 Sobic.007G108900 APE1, putative, expressed -
12 Sobic.005G172400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PAP fibrillin family domain containing protein, expressed -
13 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
14 Sobic.001G104700 expressed protein -
15 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
16 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
17 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
18 Sobic.004G275000 heat shock protein DnaJ, putative, expressed -
19 Sobic.007G046950 - -
20 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic009G241100 Sobic009G241100 Sobic001G436400 Sobic001G436400 Sobic009G241100--Sobic001G436400 Sobic001G104600 Sobic001G104600 Sobic009G241100--Sobic001G104600 Sobic003G103300 Sobic003G103300 Sobic009G241100--Sobic003G103300 Sobic001G411100 Sobic001G411100 Sobic009G241100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic009G241100--Sobic007G124500 Sobic005G062700 Sobic005G062700 Sobic009G241100--Sobic005G062700 Sobic001G509200 Sobic001G509200 Sobic009G241100--Sobic001G509200 Sobic001G500700 Sobic001G500700 Sobic009G241100--Sobic001G500700 Sobic005G005400 Sobic005G005400 Sobic009G241100--Sobic005G005400 Sobic004G103300 Sobic004G103300 Sobic001G436400--Sobic004G103300 Sobic005G028800 Sobic005G028800 Sobic001G436400--Sobic005G028800 Sobic007G166300 Sobic007G166300 Sobic001G436400--Sobic007G166300 Sobic007G108900 Sobic007G108900 Sobic001G436400--Sobic007G108900 Sobic001G436400--Sobic001G509200 Sobic001G015200 Sobic001G015200 Sobic001G436400--Sobic001G015200 Sobic001G393300 Sobic001G393300 Sobic001G436400--Sobic001G393300 Sobic004G124400 Sobic004G124400 Sobic001G436400--Sobic004G124400 Sobic002G298800 Sobic002G298800 Sobic001G436400--Sobic002G298800 Sobic001G104700 Sobic001G104700 Sobic001G104600--Sobic001G104700 Sobic001G104600--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic001G104600--Sobic007G046950 Sobic001G104600--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G104600--Sobic002G030900 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic010G101000 Sobic010G101000 Sobic001G104600--Sobic010G101000 Sobic003G103300--Sobic001G015200 Sobic008G088821 Sobic008G088821 Sobic003G103300--Sobic008G088821 Sobic004G268400 Sobic004G268400 Sobic003G103300--Sobic004G268400 Sobic003G103300--Sobic010G101000 Sobic001G018000 Sobic001G018000 Sobic003G103300--Sobic001G018000 Sobic003G103300--Sobic001G411100 Sobic003G103300--Sobic001G104700 Sobic002G060800 Sobic002G060800 Sobic003G103300--Sobic002G060800 Sobic002G351200 Sobic002G351200 Sobic003G103300--Sobic002G351200 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic001G411100--Sobic003G103300 Sobic001G411100--Sobic002G351200 Sobic004G267700 Sobic004G267700 Sobic001G411100--Sobic004G267700 Sobic002G072500 Sobic002G072500 Sobic007G124500--Sobic002G072500 Sobic007G124500--Sobic001G411100 Sobic007G124500--Sobic007G166300 Sobic007G124500--Sobic001G509200 Sobic010G100900 Sobic010G100900 Sobic007G124500--Sobic010G100900 Sobic007G124500--Sobic002G351200 Sobic007G124500--Sobic004G103300 Sobic010G231500 Sobic010G231500 Sobic007G124500--Sobic010G231500 Sobic007G124500--Sobic001G393300 Sobic009G225600 Sobic009G225600 Sobic005G062700--Sobic009G225600 Sobic005G062700--Sobic001G015200 Sobic002G047400 Sobic002G047400 Sobic005G062700--Sobic002G047400 Sobic001G303200 Sobic001G303200 Sobic005G062700--Sobic001G303200 Sobic006G221000 Sobic006G221000 Sobic005G062700--Sobic006G221000 Sobic005G062700--Sobic001G509200 Sobic005G062700--Sobic005G172400 Sobic005G062700--Sobic007G108900 Sobic004G305900 Sobic004G305900 Sobic005G062700--Sobic004G305900 Sobic007G135800 Sobic007G135800 Sobic001G509200--Sobic007G135800 Sobic001G509200--Sobic004G103300 Sobic001G509200--Sobic001G393300 Sobic001G509200--Sobic007G108900 Sobic001G509200--Sobic007G166300 Sobic003G094100 Sobic003G094100 Sobic001G509200--Sobic003G094100 Sobic006G213700 Sobic006G213700 Sobic001G509200--Sobic006G213700 Sobic006G090100 Sobic006G090100 Sobic001G509200--Sobic006G090100 Sobic009G073900 Sobic009G073900 Sobic001G509200--Sobic009G073900 Sobic006G265900 Sobic006G265900 Sobic001G500700--Sobic006G265900 Sobic007G053800 Sobic007G053800 Sobic001G500700--Sobic007G053800 Sobic006G097500 Sobic006G097500 Sobic001G500700--Sobic006G097500 Sobic010G245200 Sobic010G245200 Sobic001G500700--Sobic010G245200 Sobic001G500700--Sobic002G298800 Sobic006G102000 Sobic006G102000 Sobic001G500700--Sobic006G102000 Sobic001G122300 Sobic001G122300 Sobic001G500700--Sobic001G122300 Sobic010G181300 Sobic010G181300 Sobic001G500700--Sobic010G181300 Sobic001G500700--Sobic007G108900 Sobic005G005400--Sobic006G097500 Sobic001G368600 Sobic001G368600 Sobic005G005400--Sobic001G368600 Sobic005G005400--Sobic004G103300 Sobic005G005400--Sobic002G298800 Sobic005G005400--Sobic007G124500 Sobic005G005400--Sobic001G393300 Sobic005G005400--Sobic002G072500 Sobic005G005400--Sobic010G231500 Sobic005G005400--Sobic006G265900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.