Gene annotation
Transcriptome id Sobic.004G275000.1
Synonym Sb04g031210
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt C5Y0R6
Pfam PF00226
Panther DB PTHR24078
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16650 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os02g46640.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a021609
Brachypodium KQK00844 , KQK00843 , PNT69260
Barley -
Wheat TraesCS6D02G250300 , TraesCS6A02G264600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G275000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G062700 nifU, putative, expressed -
2 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
3 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
4 Sobic.007G108900 APE1, putative, expressed -
5 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
6 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
7 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G020100 expressed protein -
9 Sobic.009G241100 expressed protein -
10 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
11 Sobic.005G172400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PAP fibrillin family domain containing protein, expressed -
12 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
13 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
14 Sobic.001G289500 kinase, pfkB family, putative, expressed -
15 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -
16 Sobic.004G035900 expressed protein -
17 Sobic.001G500700 expressed protein -
18 Sobic.009G073900 thioredoxin, putative, expressed -
19 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
20 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase


Gene co-expression network
sample Sobic004G275000 Sobic004G275000 Sobic005G062700 Sobic005G062700 Sobic004G275000--Sobic005G062700 Sobic001G303200 Sobic001G303200 Sobic004G275000--Sobic001G303200 Sobic006G102000 Sobic006G102000 Sobic004G275000--Sobic006G102000 Sobic007G108900 Sobic007G108900 Sobic004G275000--Sobic007G108900 Sobic001G491000 Sobic001G491000 Sobic004G275000--Sobic001G491000 Sobic001G015200 Sobic001G015200 Sobic004G275000--Sobic001G015200 Sobic003G094100 Sobic003G094100 Sobic004G275000--Sobic003G094100 Sobic001G020100 Sobic001G020100 Sobic004G275000--Sobic001G020100 Sobic009G241100 Sobic009G241100 Sobic004G275000--Sobic009G241100 Sobic009G225600 Sobic009G225600 Sobic005G062700--Sobic009G225600 Sobic005G062700--Sobic001G015200 Sobic002G047400 Sobic002G047400 Sobic005G062700--Sobic002G047400 Sobic005G062700--Sobic001G303200 Sobic006G221000 Sobic006G221000 Sobic005G062700--Sobic006G221000 Sobic001G509200 Sobic001G509200 Sobic005G062700--Sobic001G509200 Sobic005G172400 Sobic005G172400 Sobic005G062700--Sobic005G172400 Sobic005G062700--Sobic007G108900 Sobic004G305900 Sobic004G305900 Sobic005G062700--Sobic004G305900 Sobic001G283100 Sobic001G283100 Sobic001G303200--Sobic001G283100 Sobic002G382700 Sobic002G382700 Sobic001G303200--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic001G303200--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic001G303200--Sobic001G207800 Sobic001G303200--Sobic006G102000 Sobic001G303200--Sobic007G108900 Sobic001G303200--Sobic006G221000 Sobic006G090100 Sobic006G090100 Sobic001G303200--Sobic006G090100 Sobic001G303200--Sobic003G094100 Sobic006G102000--Sobic007G108900 Sobic009G237000 Sobic009G237000 Sobic006G102000--Sobic009G237000 Sobic001G289500 Sobic001G289500 Sobic006G102000--Sobic001G289500 Sobic006G102000--Sobic003G094100 Sobic010G181300 Sobic010G181300 Sobic006G102000--Sobic010G181300 Sobic002G275300 Sobic002G275300 Sobic006G102000--Sobic002G275300 Sobic006G102000--Sobic001G491000 Sobic006G207800 Sobic006G207800 Sobic006G102000--Sobic006G207800 Sobic004G303200 Sobic004G303200 Sobic006G102000--Sobic004G303200 Sobic007G108900--Sobic003G094100 Sobic007G108900--Sobic001G509200 Sobic004G103300 Sobic004G103300 Sobic007G108900--Sobic004G103300 Sobic001G393300 Sobic001G393300 Sobic007G108900--Sobic001G393300 Sobic007G108900--Sobic006G102000 Sobic007G108900--Sobic001G283100 Sobic007G108900--Sobic010G181300 Sobic007G166300 Sobic007G166300 Sobic007G108900--Sobic007G166300 Sobic002G298800 Sobic002G298800 Sobic007G108900--Sobic002G298800 Sobic006G238200 Sobic006G238200 Sobic001G491000--Sobic006G238200 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic009G129300 Sobic009G129300 Sobic001G491000--Sobic009G129300 Sobic002G370600 Sobic002G370600 Sobic001G491000--Sobic002G370600 Sobic009G237100 Sobic009G237100 Sobic001G491000--Sobic009G237100 Sobic004G305800 Sobic004G305800 Sobic001G491000--Sobic004G305800 Sobic008G088821 Sobic008G088821 Sobic001G015200--Sobic008G088821 Sobic001G015200--Sobic007G166300 Sobic003G103300 Sobic003G103300 Sobic001G015200--Sobic003G103300 Sobic006G140500 Sobic006G140500 Sobic001G015200--Sobic006G140500 Sobic001G015200--Sobic002G047400 Sobic001G015200--Sobic001G509200 Sobic001G015200--Sobic001G393300 Sobic009G119300 Sobic009G119300 Sobic001G015200--Sobic009G119300 Sobic010G101000 Sobic010G101000 Sobic001G015200--Sobic010G101000 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic007G157300 Sobic007G157300 Sobic003G094100--Sobic007G157300 Sobic003G094100--Sobic004G103300 Sobic001G180200 Sobic001G180200 Sobic003G094100--Sobic001G180200 Sobic003G094100--Sobic002G298800 Sobic001G020100--Sobic001G491000 Sobic003G370000 Sobic003G370000 Sobic001G020100--Sobic003G370000 Sobic001G020100--Sobic001G289500 Sobic007G161500 Sobic007G161500 Sobic001G020100--Sobic007G161500 Sobic006G130300 Sobic006G130300 Sobic001G020100--Sobic006G130300 Sobic005G056400 Sobic005G056400 Sobic001G020100--Sobic005G056400 Sobic001G076900 Sobic001G076900 Sobic001G020100--Sobic001G076900 Sobic001G020100--Sobic006G238200 Sobic001G020100--Sobic001G100000 Sobic001G436400 Sobic001G436400 Sobic009G241100--Sobic001G436400 Sobic001G104600 Sobic001G104600 Sobic009G241100--Sobic001G104600 Sobic009G241100--Sobic003G103300 Sobic001G411100 Sobic001G411100 Sobic009G241100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic009G241100--Sobic007G124500 Sobic009G241100--Sobic005G062700 Sobic009G241100--Sobic001G509200 Sobic001G500700 Sobic001G500700 Sobic009G241100--Sobic001G500700 Sobic005G005400 Sobic005G005400 Sobic009G241100--Sobic005G005400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.