Gene annotation
Transcriptome id Sobic.007G046950.1,Sobic.007G046950.3,Sobic.007G046950.4,Sobic.007G046950.2
Synonym -
Functional annotation -
UniProt A0A1Z5R916
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G104600 expressed protein -
2 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
3 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
4 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
6 Sobic.001G104700 expressed protein -
7 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
8 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
9 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
10 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
11 Sobic.001G411100 expressed protein -
12 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.007G124500 methyltransferase, putative, expressed -
14 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
15 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
16 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
17 Sobic.007G108900 APE1, putative, expressed -
18 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
19 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -
20 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -


Gene co-expression network
sample Sobic007G046950 Sobic007G046950 Sobic001G104600 Sobic001G104600 Sobic007G046950--Sobic001G104600 Sobic001G015200 Sobic001G015200 Sobic007G046950--Sobic001G015200 Sobic010G101000 Sobic010G101000 Sobic007G046950--Sobic010G101000 Sobic002G030900 Sobic002G030900 Sobic007G046950--Sobic002G030900 Sobic002G060800 Sobic002G060800 Sobic007G046950--Sobic002G060800 Sobic001G104700 Sobic001G104700 Sobic007G046950--Sobic001G104700 Sobic002G047400 Sobic002G047400 Sobic007G046950--Sobic002G047400 Sobic003G103300 Sobic003G103300 Sobic007G046950--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic007G046950--Sobic004G125800 Sobic001G104600--Sobic001G104700 Sobic001G104600--Sobic001G015200 Sobic001G104600--Sobic007G046950 Sobic001G411100 Sobic001G411100 Sobic001G104600--Sobic001G411100 Sobic001G104600--Sobic002G030900 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic001G104600--Sobic010G101000 Sobic008G088821 Sobic008G088821 Sobic001G015200--Sobic008G088821 Sobic007G166300 Sobic007G166300 Sobic001G015200--Sobic007G166300 Sobic001G015200--Sobic003G103300 Sobic006G140500 Sobic006G140500 Sobic001G015200--Sobic006G140500 Sobic001G015200--Sobic002G047400 Sobic001G509200 Sobic001G509200 Sobic001G015200--Sobic001G509200 Sobic001G393300 Sobic001G393300 Sobic001G015200--Sobic001G393300 Sobic009G119300 Sobic009G119300 Sobic001G015200--Sobic009G119300 Sobic001G015200--Sobic010G101000 Sobic004G267700 Sobic004G267700 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic003G186800 Sobic003G186800 Sobic010G101000--Sobic003G186800 Sobic002G351200 Sobic002G351200 Sobic010G101000--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G101000--Sobic001G018000 Sobic010G104700 Sobic010G104700 Sobic010G101000--Sobic010G104700 Sobic004G268400 Sobic004G268400 Sobic010G101000--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G101000--Sobic003G304300 Sobic002G030900--Sobic010G101000 Sobic002G030900--Sobic001G411100 Sobic002G030900--Sobic001G018000 Sobic002G030900--Sobic004G268400 Sobic002G030900--Sobic001G104700 Sobic002G030900--Sobic004G267700 Sobic002G030900--Sobic003G186800 Sobic007G124500 Sobic007G124500 Sobic002G030900--Sobic007G124500 Sobic002G030900--Sobic008G088821 Sobic002G060800--Sobic002G351200 Sobic002G060800--Sobic009G225600 Sobic010G223200 Sobic010G223200 Sobic002G060800--Sobic010G223200 Sobic002G060800--Sobic003G103300 Sobic001G046000 Sobic001G046000 Sobic002G060800--Sobic001G046000 Sobic006G090100 Sobic006G090100 Sobic002G060800--Sobic006G090100 Sobic002G060800--Sobic010G101000 Sobic004G317700 Sobic004G317700 Sobic002G060800--Sobic004G317700 Sobic004G271600 Sobic004G271600 Sobic002G060800--Sobic004G271600 Sobic001G104700--Sobic001G411100 Sobic001G104700--Sobic002G030900 Sobic001G104700--Sobic001G104600 Sobic001G104700--Sobic003G103300 Sobic001G104700--Sobic001G018000 Sobic001G104700--Sobic010G101000 Sobic001G104700--Sobic004G125800 Sobic001G104700--Sobic004G268400 Sobic001G104700--Sobic004G267700 Sobic002G047400--Sobic009G225600 Sobic008G149100 Sobic008G149100 Sobic002G047400--Sobic008G149100 Sobic002G047400--Sobic003G186800 Sobic002G047400--Sobic001G046000 Sobic003G228300 Sobic003G228300 Sobic002G047400--Sobic003G228300 Sobic002G047400--Sobic001G015200 Sobic002G047400--Sobic010G101000 Sobic002G047400--Sobic001G509200 Sobic001G485100 Sobic001G485100 Sobic002G047400--Sobic001G485100 Sobic003G103300--Sobic001G015200 Sobic003G103300--Sobic008G088821 Sobic003G103300--Sobic004G268400 Sobic003G103300--Sobic010G101000 Sobic003G103300--Sobic001G018000 Sobic003G103300--Sobic001G411100 Sobic003G103300--Sobic001G104700 Sobic003G103300--Sobic002G060800 Sobic003G103300--Sobic002G351200 Sobic004G125800--Sobic001G018000 Sobic004G125800--Sobic001G104700 Sobic004G125800--Sobic002G030900 Sobic004G125800--Sobic010G101000 Sobic004G125800--Sobic009G225600 Sobic004G125800--Sobic007G124500 Sobic004G125800--Sobic001G411100 Sobic004G125800--Sobic002G351200 Sobic004G125800--Sobic001G046000
Octagon: transcription factors


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