Gene annotation
Transcriptome id Sobic.002G290400.1
Synonym Sb02g032180
Functional annotation Protein kinase superfamily protein (PubMedID : 26465154)
serine/threonine-protein kinase SRPK1, putative, expressed
UniProt C5X7P3
Pfam PF00069
Panther DB PTHR24055 PTHR24055:SF220
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G35500 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g37949.1 : serine/threonine-protein kinase SRPK1, putative, expressed
MaizeGDB (Corn) Zm00025a014523 , Zm00025a047840
Brachypodium KQK16317 , KQJ91378
Barley HORVU5Hr1G087690.3 , HORVU5Hr1G087690.2 , HORVU5Hr1G087690.1 , HORVU5Hr1G002400.1
Wheat TraesCS5A02G352900 , TraesCS5D02G359900 , TraesCS5B02G355100
Populus -


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cDNA sequences
Sobic.002G290400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
2 Sobic.003G076500 MYB family transcription factor, putative, expressed -
3 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
5 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
6 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
7 Sobic.006G092400 calmodulin binding protein, putative, expressed -
8 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
9 Sobic.010G230500 expressed protein -
10 Sobic.010G074300 smr domain containing protein, expressed -
11 Sobic.003G350800 SLT1 protein, putative, expressed -
12 Sobic.003G043300 early fruit mRNA, putative, expressed -
13 Sobic.003G295900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
15 Sobic.009G200800 protein kinase domain containing protein, expressed -
16 Sobic.006G090000 DUF1771 domain containing protein, putative, expressed -
17 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
19 Sobic.004G321900 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
20 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -


Gene co-expression network
sample Sobic002G290400 Sobic002G290400 Sobic006G209400 Sobic006G209400 Sobic002G290400--Sobic006G209400 Sobic003G076500 Sobic003G076500 Sobic002G290400--Sobic003G076500 Sobic010G251300 Sobic010G251300 Sobic002G290400--Sobic010G251300 Sobic003G309200 Sobic003G309200 Sobic002G290400--Sobic003G309200 Sobic001G414500 Sobic001G414500 Sobic002G290400--Sobic001G414500 Sobic008G089900 Sobic008G089900 Sobic002G290400--Sobic008G089900 Sobic006G092400 Sobic006G092400 Sobic002G290400--Sobic006G092400 Sobic004G118200 Sobic004G118200 Sobic002G290400--Sobic004G118200 Sobic010G230500 Sobic010G230500 Sobic002G290400--Sobic010G230500 Sobic006G209400--Sobic006G092400 Sobic003G295900 Sobic003G295900 Sobic006G209400--Sobic003G295900 Sobic006G209400--Sobic002G290400 Sobic001G541100 Sobic001G541100 Sobic006G209400--Sobic001G541100 Sobic001G031600 Sobic001G031600 Sobic006G209400--Sobic001G031600 Sobic009G165800 Sobic009G165800 Sobic006G209400--Sobic009G165800 Sobic001G395400 Sobic001G395400 Sobic006G209400--Sobic001G395400 Sobic006G209400--Sobic003G076500 Sobic010G116400 Sobic010G116400 Sobic006G209400--Sobic010G116400 Sobic003G076500--Sobic002G290400 Sobic003G076500--Sobic006G209400 Sobic003G076500--Sobic006G092400 Sobic001G162100 Sobic001G162100 Sobic003G076500--Sobic001G162100 Sobic010G130000 Sobic010G130000 Sobic003G076500--Sobic010G130000 Sobic003G076500--Sobic001G541100 Sobic003G076500--Sobic003G309200 Sobic009G219900 Sobic009G219900 Sobic003G076500--Sobic009G219900 Sobic003G076500--Sobic001G031600 Sobic010G251300--Sobic002G290400 Sobic009G200800 Sobic009G200800 Sobic010G251300--Sobic009G200800 Sobic003G043300 Sobic003G043300 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic003G350800 Sobic003G350800 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic001G333600 Sobic001G333600 Sobic010G251300--Sobic001G333600 Sobic001G057700 Sobic001G057700 Sobic010G251300--Sobic001G057700 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic002G134600 Sobic002G134600 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic006G033200 Sobic006G033200 Sobic003G309200--Sobic006G033200 Sobic003G309200--Sobic002G383600 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic001G414500--Sobic008G089900 Sobic001G414500--Sobic009G219900 Sobic006G261300 Sobic006G261300 Sobic001G414500--Sobic006G261300 Sobic001G414500--Sobic006G092400 Sobic002G217400 Sobic002G217400 Sobic001G414500--Sobic002G217400 Sobic003G077900 Sobic003G077900 Sobic001G414500--Sobic003G077900 Sobic001G414500--Sobic002G290400 Sobic006G090000 Sobic006G090000 Sobic001G414500--Sobic006G090000 Sobic001G503300 Sobic001G503300 Sobic001G414500--Sobic001G503300 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic004G103000 Sobic004G103000 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic002G130800 Sobic002G130800 Sobic006G092400--Sobic002G130800 Sobic006G092400--Sobic006G209400 Sobic010G074300 Sobic010G074300 Sobic006G092400--Sobic010G074300 Sobic004G235000 Sobic004G235000 Sobic006G092400--Sobic004G235000 Sobic001G508100 Sobic001G508100 Sobic006G092400--Sobic001G508100 Sobic003G220800 Sobic003G220800 Sobic006G092400--Sobic003G220800 Sobic006G092400--Sobic006G090000 Sobic010G147100 Sobic010G147100 Sobic006G092400--Sobic010G147100 Sobic004G118200--Sobic010G074300 Sobic003G229300 Sobic003G229300 Sobic004G118200--Sobic003G229300 Sobic002G386100 Sobic002G386100 Sobic004G118200--Sobic002G386100 Sobic001G268200 Sobic001G268200 Sobic004G118200--Sobic001G268200 Sobic004G118200--Sobic002G130800 Sobic001G476700 Sobic001G476700 Sobic004G118200--Sobic001G476700 Sobic004G118200--Sobic010G147100 Sobic010G013800 Sobic010G013800 Sobic004G118200--Sobic010G013800 Sobic006G133900 Sobic006G133900 Sobic004G118200--Sobic006G133900 Sobic010G230500--Sobic010G074300 Sobic010G230500--Sobic003G295900 Sobic004G189200 Sobic004G189200 Sobic010G230500--Sobic004G189200 Sobic010G230500--Sobic008G089900 Sobic010G230500--Sobic004G103000 Sobic002G358800 Sobic002G358800 Sobic010G230500--Sobic002G358800 Sobic008G077500 Sobic008G077500 Sobic010G230500--Sobic008G077500 Sobic007G090900 Sobic007G090900 Sobic010G230500--Sobic007G090900 Sobic010G230500--Sobic002G290400
Octagon: transcription factors


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