Gene annotation
Transcriptome id Sobic.010G230500.2,Sobic.010G230500.1
Synonym Sb10g027310
Functional annotation expressed protein
UniProt C5Z7V5 , A0A1W0VUC7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26980 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os06g46590.2 : expressed protein
MaizeGDB (Corn) Zm00025a018020 , Zm00025a041882
Brachypodium KQK17157 , KQK17156
Barley HORVU7Hr1G105350.6 , HORVU7Hr1G105350.1 , HORVU7Hr1G105350.3 , HORVU7Hr1G105350.2 , HORVU7Hr1G105350.5 , HORVU7Hr1G105350.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G074300 smr domain containing protein, expressed -
2 Sobic.003G295900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
3 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
5 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
6 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
7 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.007G090900 heat shock protein-related, putative, expressed -
9 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
10 Sobic.003G350800 SLT1 protein, putative, expressed -
11 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
12 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
13 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
14 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
15 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
16 Sobic.003G043300 early fruit mRNA, putative, expressed -
17 Sobic.003G157900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycine-rich protein, putative, expressed -
18 Sobic.001G106700 expressed protein -
19 Sobic.002G204200 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
20 Sobic.007G216100 expressed protein -


Gene co-expression network
sample Sobic010G230500 Sobic010G230500 Sobic010G074300 Sobic010G074300 Sobic010G230500--Sobic010G074300 Sobic003G295900 Sobic003G295900 Sobic010G230500--Sobic003G295900 Sobic004G189200 Sobic004G189200 Sobic010G230500--Sobic004G189200 Sobic008G089900 Sobic008G089900 Sobic010G230500--Sobic008G089900 Sobic004G103000 Sobic004G103000 Sobic010G230500--Sobic004G103000 Sobic002G358800 Sobic002G358800 Sobic010G230500--Sobic002G358800 Sobic008G077500 Sobic008G077500 Sobic010G230500--Sobic008G077500 Sobic007G090900 Sobic007G090900 Sobic010G230500--Sobic007G090900 Sobic002G290400 Sobic002G290400 Sobic010G230500--Sobic002G290400 Sobic010G147100 Sobic010G147100 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic006G209400 Sobic006G209400 Sobic003G295900--Sobic006G209400 Sobic002G375300 Sobic002G375300 Sobic003G295900--Sobic002G375300 Sobic007G216100 Sobic007G216100 Sobic003G295900--Sobic007G216100 Sobic003G295900--Sobic010G230500 Sobic003G099100 Sobic003G099100 Sobic003G295900--Sobic003G099100 Sobic003G295900--Sobic002G290400 Sobic002G045300 Sobic002G045300 Sobic003G295900--Sobic002G045300 Sobic003G416400 Sobic003G416400 Sobic003G295900--Sobic003G416400 Sobic001G031600 Sobic001G031600 Sobic003G295900--Sobic001G031600 Sobic006G257800 Sobic006G257800 Sobic004G189200--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic004G189200--Sobic001G062300 Sobic006G051800 Sobic006G051800 Sobic004G189200--Sobic006G051800 Sobic008G167600 Sobic008G167600 Sobic004G189200--Sobic008G167600 Sobic004G189200--Sobic007G190000 Sobic004G231900 Sobic004G231900 Sobic004G189200--Sobic004G231900 Sobic003G301500 Sobic003G301500 Sobic004G189200--Sobic003G301500 Sobic002G383600 Sobic002G383600 Sobic004G189200--Sobic002G383600 Sobic004G179300 Sobic004G179300 Sobic004G189200--Sobic004G179300 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic001G414500 Sobic001G414500 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300 Sobic004G103000--Sobic001G243200 Sobic006G259600 Sobic006G259600 Sobic004G103000--Sobic006G259600 Sobic004G103000--Sobic008G167600 Sobic001G352400 Sobic001G352400 Sobic004G103000--Sobic001G352400 Sobic001G476700 Sobic001G476700 Sobic004G103000--Sobic001G476700 Sobic004G169000 Sobic004G169000 Sobic004G103000--Sobic004G169000 Sobic004G103000--Sobic010G074300 Sobic001G333800 Sobic001G333800 Sobic004G103000--Sobic001G333800 Sobic005G106600 Sobic005G106600 Sobic004G103000--Sobic005G106600 Sobic001G333600 Sobic001G333600 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G217700 Sobic002G217700 Sobic002G358800--Sobic002G217700 Sobic009G258100 Sobic009G258100 Sobic002G358800--Sobic009G258100 Sobic002G358800--Sobic010G230500 Sobic003G350800 Sobic003G350800 Sobic002G358800--Sobic003G350800 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic008G077500--Sobic007G090900 Sobic004G268300 Sobic004G268300 Sobic008G077500--Sobic004G268300 Sobic008G077500--Sobic001G243200 Sobic008G052900 Sobic008G052900 Sobic008G077500--Sobic008G052900 Sobic009G103000 Sobic009G103000 Sobic008G077500--Sobic009G103000 Sobic006G212800 Sobic006G212800 Sobic008G077500--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic008G077500--Sobic003G157900 Sobic003G260100 Sobic003G260100 Sobic008G077500--Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic008G077500--Sobic002G162400 Sobic007G090900--Sobic006G212800 Sobic007G090900--Sobic003G157900 Sobic007G090900--Sobic009G103000 Sobic009G073900 Sobic009G073900 Sobic007G090900--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic007G090900--Sobic001G077300 Sobic001G263100 Sobic001G263100 Sobic007G090900--Sobic001G263100 Sobic007G090900--Sobic002G162400 Sobic009G207900 Sobic009G207900 Sobic007G090900--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic007G090900--Sobic003G073800 Sobic002G290400--Sobic006G209400 Sobic003G076500 Sobic003G076500 Sobic002G290400--Sobic003G076500 Sobic010G251300 Sobic010G251300 Sobic002G290400--Sobic010G251300 Sobic003G309200 Sobic003G309200 Sobic002G290400--Sobic003G309200 Sobic002G290400--Sobic001G414500 Sobic002G290400--Sobic008G089900 Sobic002G290400--Sobic006G092400 Sobic002G290400--Sobic004G118200 Sobic002G290400--Sobic010G230500
Octagon: transcription factors


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