Gene annotation
Transcriptome id Sobic.002G358800.1
Synonym Sb02g037950, SAT32, ATSAT32
Functional annotation interferon-related developmental regulator, putative, expressed
UniProt C5XD39
Pfam PF05004
Panther DB PTHR12354 PTHR12354:SF10
NCBI CDD KOG2842; Interferon-related protein PC4 like
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27760 : interferon-related developmental regulator family protein / IFRD protein family
RAP-DB (Rice) LOC_Os07g39900.1 : interferon-related developmental regulator, putative, expressed
MaizeGDB (Corn) Zm00025a048582 , Zm00025a015061
Brachypodium KQK15465
Barley HORVU2Hr1G035310.4 , HORVU2Hr1G035310.5 , HORVU2Hr1G035310.6 , HORVU2Hr1G035310.7 , HORVU2Hr1G035310.1 , HORVU2Hr1G035310.2 , HORVU2Hr1G035310.3 , HORVU2Hr1G035310.8 , HORVU2Hr1G035310.12 , HORVU2Hr1G035310.13 , HORVU2Hr1G035310.10 , HORVU2Hr1G035310.11
Wheat TraesCS2B02G213400 , TraesCS2D02G194200 , TraesCS2A02G193300
Populus -


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cDNA sequences
Sobic.002G358800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
2 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
3 Sobic.002G217700 growth regulator related protein, putative, expressed -
4 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
5 Sobic.010G230500 expressed protein -
6 Sobic.003G350800 SLT1 protein, putative, expressed -
7 Sobic.001G031600 calmodulin binding protein, putative, expressed -
8 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
9 Sobic.006G092400 calmodulin binding protein, putative, expressed -
10 Sobic.003G043300 early fruit mRNA, putative, expressed -
11 Sobic.004G321900 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
12 Sobic.010G027000 enolase, putative, expressed K01689: ENO, enolase
13 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
14 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
15 Sobic.002G413000 AAA-type ATPase family protein, putative, expressed -
16 Sobic.001G406100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15100: SLC25A1, solute carrier family 25 (mitochondrial citrate transporter), member 1
17 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
18 Sobic.009G229200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
19 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
20 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase


Gene co-expression network
sample Sobic002G358800 Sobic002G358800 Sobic001G333600 Sobic001G333600 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G217700 Sobic002G217700 Sobic002G358800--Sobic002G217700 Sobic009G258100 Sobic009G258100 Sobic002G358800--Sobic009G258100 Sobic010G230500 Sobic010G230500 Sobic002G358800--Sobic010G230500 Sobic003G350800 Sobic003G350800 Sobic002G358800--Sobic003G350800 Sobic001G031600 Sobic001G031600 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic001G333600--Sobic002G358800 Sobic001G333600--Sobic003G350800 Sobic008G047400 Sobic008G047400 Sobic001G333600--Sobic008G047400 Sobic010G251300 Sobic010G251300 Sobic001G333600--Sobic010G251300 Sobic009G200800 Sobic009G200800 Sobic001G333600--Sobic009G200800 Sobic009G231200 Sobic009G231200 Sobic001G333600--Sobic009G231200 Sobic009G066900 Sobic009G066900 Sobic001G333600--Sobic009G066900 Sobic001G333600--Sobic002G217700 Sobic003G309200 Sobic003G309200 Sobic001G333600--Sobic003G309200 Sobic010G188100 Sobic010G188100 Sobic001G328200--Sobic010G188100 Sobic009G219900 Sobic009G219900 Sobic001G328200--Sobic009G219900 Sobic001G328200--Sobic006G092400 Sobic010G101500 Sobic010G101500 Sobic001G328200--Sobic010G101500 Sobic003G002400 Sobic003G002400 Sobic001G328200--Sobic003G002400 Sobic003G312200 Sobic003G312200 Sobic001G328200--Sobic003G312200 Sobic001G328200--Sobic002G358800 Sobic007G139700 Sobic007G139700 Sobic001G328200--Sobic007G139700 Sobic002G166900 Sobic002G166900 Sobic001G328200--Sobic002G166900 Sobic003G043300 Sobic003G043300 Sobic002G217700--Sobic003G043300 Sobic002G217700--Sobic002G358800 Sobic002G217700--Sobic010G251300 Sobic003G221900 Sobic003G221900 Sobic002G217700--Sobic003G221900 Sobic003G220800 Sobic003G220800 Sobic002G217700--Sobic003G220800 Sobic003G373500 Sobic003G373500 Sobic002G217700--Sobic003G373500 Sobic002G217700--Sobic001G333600 Sobic006G011300 Sobic006G011300 Sobic002G217700--Sobic006G011300 Sobic002G217700--Sobic009G066900 Sobic009G258100--Sobic002G358800 Sobic009G258100--Sobic010G230500 Sobic008G077600 Sobic008G077600 Sobic009G258100--Sobic008G077600 Sobic003G425300 Sobic003G425300 Sobic009G258100--Sobic003G425300 Sobic003G373600 Sobic003G373600 Sobic009G258100--Sobic003G373600 Sobic009G129800 Sobic009G129800 Sobic009G258100--Sobic009G129800 Sobic002G290400 Sobic002G290400 Sobic009G258100--Sobic002G290400 Sobic009G258100--Sobic003G350800 Sobic009G180500 Sobic009G180500 Sobic009G258100--Sobic009G180500 Sobic010G074300 Sobic010G074300 Sobic010G230500--Sobic010G074300 Sobic003G295900 Sobic003G295900 Sobic010G230500--Sobic003G295900 Sobic004G189200 Sobic004G189200 Sobic010G230500--Sobic004G189200 Sobic008G089900 Sobic008G089900 Sobic010G230500--Sobic008G089900 Sobic004G103000 Sobic004G103000 Sobic010G230500--Sobic004G103000 Sobic010G230500--Sobic002G358800 Sobic008G077500 Sobic008G077500 Sobic010G230500--Sobic008G077500 Sobic007G090900 Sobic007G090900 Sobic010G230500--Sobic007G090900 Sobic010G230500--Sobic002G290400 Sobic009G246300 Sobic009G246300 Sobic003G350800--Sobic009G246300 Sobic003G350800--Sobic001G333600 Sobic003G350800--Sobic010G251300 Sobic003G350800--Sobic003G043300 Sobic003G350800--Sobic002G358800 Sobic001G221800 Sobic001G221800 Sobic003G350800--Sobic001G221800 Sobic003G350800--Sobic002G290400 Sobic003G350800--Sobic010G230500 Sobic003G350800--Sobic008G077500 Sobic001G105500 Sobic001G105500 Sobic001G031600--Sobic001G105500 Sobic002G413000 Sobic002G413000 Sobic001G031600--Sobic002G413000 Sobic006G209400 Sobic006G209400 Sobic001G031600--Sobic006G209400 Sobic009G193400 Sobic009G193400 Sobic001G031600--Sobic009G193400 Sobic001G031600--Sobic003G002400 Sobic001G031600--Sobic003G309200 Sobic007G019800 Sobic007G019800 Sobic001G031600--Sobic007G019800 Sobic004G031600 Sobic004G031600 Sobic001G031600--Sobic004G031600 Sobic001G541100 Sobic001G541100 Sobic001G031600--Sobic001G541100 Sobic002G047700 Sobic002G047700 Sobic002G358400--Sobic002G047700 Sobic001G031100 Sobic001G031100 Sobic002G358400--Sobic001G031100 Sobic009G192000 Sobic009G192000 Sobic002G358400--Sobic009G192000 Sobic001G019800 Sobic001G019800 Sobic002G358400--Sobic001G019800 Sobic002G358400--Sobic003G373500 Sobic003G264200 Sobic003G264200 Sobic002G358400--Sobic003G264200 Sobic001G406100 Sobic001G406100 Sobic002G358400--Sobic001G406100 Sobic003G354600 Sobic003G354600 Sobic002G358400--Sobic003G354600 Sobic004G070700 Sobic004G070700 Sobic002G358400--Sobic004G070700 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic002G130800 Sobic002G130800 Sobic006G092400--Sobic002G130800 Sobic006G092400--Sobic006G209400 Sobic006G092400--Sobic010G074300 Sobic004G235000 Sobic004G235000 Sobic006G092400--Sobic004G235000 Sobic001G508100 Sobic001G508100 Sobic006G092400--Sobic001G508100 Sobic006G092400--Sobic003G220800 Sobic006G090000 Sobic006G090000 Sobic006G092400--Sobic006G090000 Sobic010G147100 Sobic010G147100 Sobic006G092400--Sobic010G147100
Octagon: transcription factors


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