Gene annotation
Transcriptome id Sobic.001G333600.1
Synonym MUB2, Sb01g032220
Functional annotation membrane-anchored ubiquitin-fold protein, putative, expressed
UniProt C5WWH9
Pfam PF13881
Panther DB PTHR13169 PTHR13169:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22050 : membrane-anchored ubiquitin-fold protein 6 precursor
RAP-DB (Rice) LOC_Os03g31290.2 : membrane-anchored ubiquitin-fold protein, putative, expressed
MaizeGDB (Corn) Zm00025a002908
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G333600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
2 Sobic.003G350800 SLT1 protein, putative, expressed -
3 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
4 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.009G200800 protein kinase domain containing protein, expressed -
6 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
7 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
8 Sobic.002G217700 growth regulator related protein, putative, expressed -
9 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
10 Sobic.001G031600 calmodulin binding protein, putative, expressed -
11 Sobic.003G076500 MYB family transcription factor, putative, expressed -
12 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
13 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
14 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
15 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
17 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
18 Sobic.003G043300 early fruit mRNA, putative, expressed -
19 Sobic.003G425500 Calcium-binding protein(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -


Gene co-expression network
sample Sobic001G333600 Sobic001G333600 Sobic002G358800 Sobic002G358800 Sobic001G333600--Sobic002G358800 Sobic003G350800 Sobic003G350800 Sobic001G333600--Sobic003G350800 Sobic008G047400 Sobic008G047400 Sobic001G333600--Sobic008G047400 Sobic010G251300 Sobic010G251300 Sobic001G333600--Sobic010G251300 Sobic009G200800 Sobic009G200800 Sobic001G333600--Sobic009G200800 Sobic009G231200 Sobic009G231200 Sobic001G333600--Sobic009G231200 Sobic009G066900 Sobic009G066900 Sobic001G333600--Sobic009G066900 Sobic002G217700 Sobic002G217700 Sobic001G333600--Sobic002G217700 Sobic003G309200 Sobic003G309200 Sobic001G333600--Sobic003G309200 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G358800--Sobic002G217700 Sobic009G258100 Sobic009G258100 Sobic002G358800--Sobic009G258100 Sobic010G230500 Sobic010G230500 Sobic002G358800--Sobic010G230500 Sobic002G358800--Sobic003G350800 Sobic001G031600 Sobic001G031600 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic009G246300 Sobic009G246300 Sobic003G350800--Sobic009G246300 Sobic003G350800--Sobic001G333600 Sobic003G350800--Sobic010G251300 Sobic003G043300 Sobic003G043300 Sobic003G350800--Sobic003G043300 Sobic003G350800--Sobic002G358800 Sobic001G221800 Sobic001G221800 Sobic003G350800--Sobic001G221800 Sobic002G290400 Sobic002G290400 Sobic003G350800--Sobic002G290400 Sobic003G350800--Sobic010G230500 Sobic008G077500 Sobic008G077500 Sobic003G350800--Sobic008G077500 Sobic008G124900 Sobic008G124900 Sobic008G047400--Sobic008G124900 Sobic010G278200 Sobic010G278200 Sobic008G047400--Sobic010G278200 Sobic006G033200 Sobic006G033200 Sobic008G047400--Sobic006G033200 Sobic004G202500 Sobic004G202500 Sobic008G047400--Sobic004G202500 Sobic003G302900 Sobic003G302900 Sobic008G047400--Sobic003G302900 Sobic010G074300 Sobic010G074300 Sobic008G047400--Sobic010G074300 Sobic004G255700 Sobic004G255700 Sobic008G047400--Sobic004G255700 Sobic010G147100 Sobic010G147100 Sobic008G047400--Sobic010G147100 Sobic008G047400--Sobic003G309200 Sobic010G251300--Sobic002G290400 Sobic010G251300--Sobic009G200800 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic010G251300--Sobic001G333600 Sobic001G057700 Sobic001G057700 Sobic010G251300--Sobic001G057700 Sobic008G152600 Sobic008G152600 Sobic009G200800--Sobic008G152600 Sobic009G200800--Sobic010G251300 Sobic009G200800--Sobic003G309200 Sobic009G200800--Sobic008G124900 Sobic009G200800--Sobic009G231200 Sobic009G200800--Sobic001G333600 Sobic009G180500 Sobic009G180500 Sobic009G200800--Sobic009G180500 Sobic009G200800--Sobic008G047400 Sobic010G249100 Sobic010G249100 Sobic009G200800--Sobic010G249100 Sobic004G031600 Sobic004G031600 Sobic009G231200--Sobic004G031600 Sobic002G293300 Sobic002G293300 Sobic009G231200--Sobic002G293300 Sobic010G052800 Sobic010G052800 Sobic009G231200--Sobic010G052800 Sobic009G231200--Sobic009G180500 Sobic001G082900 Sobic001G082900 Sobic009G231200--Sobic001G082900 Sobic009G231200--Sobic009G200800 Sobic009G231200--Sobic001G333600 Sobic005G026100 Sobic005G026100 Sobic009G231200--Sobic005G026100 Sobic009G231200--Sobic001G031600 Sobic009G066900--Sobic003G309200 Sobic009G066900--Sobic008G124900 Sobic003G119700 Sobic003G119700 Sobic009G066900--Sobic003G119700 Sobic002G134600 Sobic002G134600 Sobic009G066900--Sobic002G134600 Sobic009G066900--Sobic006G033200 Sobic009G066900--Sobic001G333600 Sobic009G108700 Sobic009G108700 Sobic009G066900--Sobic009G108700 Sobic009G066900--Sobic008G047400 Sobic007G006900 Sobic007G006900 Sobic009G066900--Sobic007G006900 Sobic002G217700--Sobic003G043300 Sobic002G217700--Sobic002G358800 Sobic002G217700--Sobic010G251300 Sobic003G221900 Sobic003G221900 Sobic002G217700--Sobic003G221900 Sobic003G220800 Sobic003G220800 Sobic002G217700--Sobic003G220800 Sobic003G373500 Sobic003G373500 Sobic002G217700--Sobic003G373500 Sobic002G217700--Sobic001G333600 Sobic006G011300 Sobic006G011300 Sobic002G217700--Sobic006G011300 Sobic002G217700--Sobic009G066900 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic003G309200--Sobic008G124900 Sobic003G309200--Sobic003G221900 Sobic003G309200--Sobic006G033200 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100
Octagon: transcription factors


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