Gene annotation
Transcriptome id Sobic.008G179900.2,Sobic.008G179900.3,Sobic.008G179900.1
Synonym OASA1, ATCYS-3A, CYTACS1, OLD3, Sb08g022280
Functional annotation cysteine synthase, putative, expressed
UniProt A0A1B6PEV4 , A0A1B6PEF6
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF101
NCBI CDD KOG1252; Cystathionine beta-synthase and related enzymes
KEGG Orthology K01738; cysteine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14880 : O-acetylserine (thiol) lyase (OAS-TL) isoform A1
RAP-DB (Rice) LOC_Os12g42980.1 : cysteine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a004773
Brachypodium KQJ85706 , KQJ85707 , KQJ85705
Barley HORVU5Hr1G005980.5 , HORVU5Hr1G005980.4 , HORVU5Hr1G005980.7 , HORVU5Hr1G005980.6 , HORVU5Hr1G005980.1 , HORVU5Hr1G005980.3 , HORVU5Hr1G005980.2 , HORVU2Hr1G074630.4 , HORVU2Hr1G074630.2 , HORVU2Hr1G074630.3
Wheat TraesCS5A02G022200 , TraesCS5B02G018700 , TraesCS5B02G018700 , TraesCS5B02G018700 , TraesCS5B02G018700 , TraesCS5D02G027600 , TraesCS5D02G027600
Populus -


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cDNA sequences
Sobic.008G179900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
2 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
3 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
4 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
5 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
6 Sobic.003G110400 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
7 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
8 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
9 Sobic.002G111000 peptidase, putative, expressed -
10 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
11 Sobic.006G247100 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
12 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
13 Sobic.008G032600 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
14 Sobic.001G496100 - -
15 Sobic.008G156700 phosphoribulokinase/Uridine kinase family protein, expressed -
16 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
17 Sobic.009G011600 expressed protein -
18 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
19 Sobic.006G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
20 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2


Gene co-expression network
sample Sobic008G179900 Sobic008G179900 Sobic004G080100 Sobic004G080100 Sobic008G179900--Sobic004G080100 Sobic004G225100 Sobic004G225100 Sobic008G179900--Sobic004G225100 Sobic004G329300 Sobic004G329300 Sobic008G179900--Sobic004G329300 Sobic009G139900 Sobic009G139900 Sobic008G179900--Sobic009G139900 Sobic001G462500 Sobic001G462500 Sobic008G179900--Sobic001G462500 Sobic003G110400 Sobic003G110400 Sobic008G179900--Sobic003G110400 Sobic008G074400 Sobic008G074400 Sobic008G179900--Sobic008G074400 Sobic001G016700 Sobic001G016700 Sobic008G179900--Sobic001G016700 Sobic002G111000 Sobic002G111000 Sobic008G179900--Sobic002G111000 Sobic010G049100 Sobic010G049100 Sobic004G080100--Sobic010G049100 Sobic004G067100 Sobic004G067100 Sobic004G080100--Sobic004G067100 Sobic003G246700 Sobic003G246700 Sobic004G080100--Sobic003G246700 Sobic002G226900 Sobic002G226900 Sobic004G080100--Sobic002G226900 Sobic001G219300 Sobic001G219300 Sobic004G080100--Sobic001G219300 Sobic008G032600 Sobic008G032600 Sobic004G080100--Sobic008G032600 Sobic003G139800 Sobic003G139800 Sobic004G080100--Sobic003G139800 Sobic004G080100--Sobic008G179900 Sobic008G089900 Sobic008G089900 Sobic004G080100--Sobic008G089900 Sobic004G225200 Sobic004G225200 Sobic004G225100--Sobic004G225200 Sobic002G244100 Sobic002G244100 Sobic004G225100--Sobic002G244100 Sobic001G334600 Sobic001G334600 Sobic004G225100--Sobic001G334600 Sobic009G167700 Sobic009G167700 Sobic004G225100--Sobic009G167700 Sobic003G388251 Sobic003G388251 Sobic004G225100--Sobic003G388251 Sobic005G178100 Sobic005G178100 Sobic004G225100--Sobic005G178100 Sobic003G354400 Sobic003G354400 Sobic004G225100--Sobic003G354400 Sobic001G305800 Sobic001G305800 Sobic004G225100--Sobic001G305800 Sobic002G087800 Sobic002G087800 Sobic004G225100--Sobic002G087800 Sobic001G282600 Sobic001G282600 Sobic004G329300--Sobic001G282600 Sobic010G169000 Sobic010G169000 Sobic004G329300--Sobic010G169000 Sobic002G266000 Sobic002G266000 Sobic004G329300--Sobic002G266000 Sobic006G104600 Sobic006G104600 Sobic004G329300--Sobic006G104600 Sobic004G329300--Sobic004G225200 Sobic009G193700 Sobic009G193700 Sobic004G329300--Sobic009G193700 Sobic003G257100 Sobic003G257100 Sobic004G329300--Sobic003G257100 Sobic003G322700 Sobic003G322700 Sobic004G329300--Sobic003G322700 Sobic007G004500 Sobic007G004500 Sobic004G329300--Sobic007G004500 Sobic004G136300 Sobic004G136300 Sobic009G139900--Sobic004G136300 Sobic002G166300 Sobic002G166300 Sobic009G139900--Sobic002G166300 Sobic010G138000 Sobic010G138000 Sobic009G139900--Sobic010G138000 Sobic003G233600 Sobic003G233600 Sobic009G139900--Sobic003G233600 Sobic004G127700 Sobic004G127700 Sobic009G139900--Sobic004G127700 Sobic009G143700 Sobic009G143700 Sobic009G139900--Sobic009G143700 Sobic003G273600 Sobic003G273600 Sobic009G139900--Sobic003G273600 Sobic007G054800 Sobic007G054800 Sobic009G139900--Sobic007G054800 Sobic001G333100 Sobic001G333100 Sobic009G139900--Sobic001G333100 Sobic001G462500--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic001G462500--Sobic006G204900 Sobic001G462500--Sobic003G322700 Sobic004G265800 Sobic004G265800 Sobic001G462500--Sobic004G265800 Sobic001G462500--Sobic001G016700 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic006G087700 Sobic006G087700 Sobic001G462500--Sobic006G087700 Sobic001G207400 Sobic001G207400 Sobic001G462500--Sobic001G207400 Sobic001G014800 Sobic001G014800 Sobic003G110400--Sobic001G014800 Sobic003G110400--Sobic008G032600 Sobic003G110400--Sobic010G049100 Sobic006G160300 Sobic006G160300 Sobic003G110400--Sobic006G160300 Sobic010G277100 Sobic010G277100 Sobic003G110400--Sobic010G277100 Sobic003G110400--Sobic008G179900 Sobic004G121300 Sobic004G121300 Sobic003G110400--Sobic004G121300 Sobic001G053000 Sobic001G053000 Sobic003G110400--Sobic001G053000 Sobic002G111200 Sobic002G111200 Sobic003G110400--Sobic002G111200 Sobic001G316400 Sobic001G316400 Sobic008G074400--Sobic001G316400 Sobic008G074400--Sobic004G225100 Sobic001G069900 Sobic001G069900 Sobic008G074400--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic008G074400--Sobic002G087800 Sobic001G359500 Sobic001G359500 Sobic008G074400--Sobic001G359500 Sobic006G091700 Sobic006G091700 Sobic008G074400--Sobic006G091700 Sobic001G504900 Sobic001G504900 Sobic008G074400--Sobic001G504900 Sobic002G430000 Sobic002G430000 Sobic001G016700--Sobic002G430000 Sobic001G016700--Sobic002G111000 Sobic001G016700--Sobic001G207400 Sobic010G139600 Sobic010G139600 Sobic001G016700--Sobic010G139600 Sobic003G110000 Sobic003G110000 Sobic001G016700--Sobic003G110000 Sobic001G390800 Sobic001G390800 Sobic001G016700--Sobic001G390800 Sobic001G016700--Sobic006G204900 Sobic001G016700--Sobic003G322700 Sobic003G086900 Sobic003G086900 Sobic001G016700--Sobic003G086900 Sobic002G111000--Sobic001G207400 Sobic002G111000--Sobic001G390800 Sobic002G111000--Sobic001G016700 Sobic001G121200 Sobic001G121200 Sobic002G111000--Sobic001G121200 Sobic003G365300 Sobic003G365300 Sobic002G111000--Sobic003G365300 Sobic002G111000--Sobic002G430000 Sobic002G111000--Sobic010G139600 Sobic010G147100 Sobic010G147100 Sobic002G111000--Sobic010G147100 Sobic001G137100 Sobic001G137100 Sobic002G111000--Sobic001G137100
Octagon: transcription factors


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