Gene annotation
Transcriptome id Sobic.006G064600.1
Synonym ACS, Sb06g015180
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
AMP-binding enzyme, putative, expressed
UniProt A0A1B6PKL7
Pfam PF13193 PF16177 PF00501
Panther DB PTHR24095 PTHR24095:SF157
NCBI CDD -
KEGG Orthology K01895; ACSS1_2, acetyl-CoA synthetase
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G36880 : acetyl-CoA synthetase
RAP-DB (Rice) LOC_Os04g33190.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a020504 , Zm00025a011588 , Zm00025a011589
Brachypodium KQJ99673 , KQJ82427
Barley HORVU2Hr1G071960.5 , HORVU2Hr1G071960.4 , HORVU2Hr1G071960.7 , HORVU2Hr1G071960.6 , HORVU2Hr1G071960.3 , HORVU2Hr1G071960.2 , HORVU2Hr1G071960.1 , HORVU2Hr1G071960.9 , HORVU2Hr1G071960.8 , HORVU6Hr1G090810.2 , HORVU6Hr1G090810.3 , HORVU6Hr1G090810.1 , HORVU2Hr1G071960.14 , HORVU2Hr1G071960.13 , HORVU2Hr1G071960.12 , HORVU2Hr1G071960.11 , HORVU2Hr1G071960.10 , HORVU6Hr1G090960.2 , HORVU6Hr1G090960.3 , HORVU6Hr1G090960.1
Wheat TraesCS6B02G431000 , TraesCS6B02G431000 , TraesCS2D02G288800 , TraesCS6A02G390600 , TraesCS6A02G390600 , TraesCS2D02G288800 , TraesCS2B02G307300 , TraesCS6D02G376900 , TraesCS6D02G376900 , TraesCS2A02G290900 , TraesCS2A02G290900 , TraesCS2A02G290900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
2 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
3 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G517800 NIN, putative, expressed -
5 Sobic.003G322700 expressed protein -
6 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
7 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
8 Sobic.003G051600 universal stress protein domain containing protein, putative, expressed -
9 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
11 Sobic.006G087700 T-complex protein 11, putative, expressed -
12 Sobic.001G282600 transporter family protein, putative, expressed -
13 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
14 Sobic.009G011600 expressed protein -
15 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
16 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
17 Sobic.009G133500 expressed protein -
18 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
19 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
20 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic006G064600 Sobic006G064600 Sobic003G257100 Sobic003G257100 Sobic006G064600--Sobic003G257100 Sobic002G266000 Sobic002G266000 Sobic006G064600--Sobic002G266000 Sobic003G320700 Sobic003G320700 Sobic006G064600--Sobic003G320700 Sobic001G517800 Sobic001G517800 Sobic006G064600--Sobic001G517800 Sobic003G322700 Sobic003G322700 Sobic006G064600--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic006G064600--Sobic001G462500 Sobic003G301900 Sobic003G301900 Sobic006G064600--Sobic003G301900 Sobic003G051600 Sobic003G051600 Sobic006G064600--Sobic003G051600 Sobic001G305500 Sobic001G305500 Sobic006G064600--Sobic001G305500 Sobic009G029600 Sobic009G029600 Sobic003G257100--Sobic009G029600 Sobic006G199000 Sobic006G199000 Sobic003G257100--Sobic006G199000 Sobic008G153400 Sobic008G153400 Sobic003G257100--Sobic008G153400 Sobic003G398100 Sobic003G398100 Sobic003G257100--Sobic003G398100 Sobic010G107000 Sobic010G107000 Sobic003G257100--Sobic010G107000 Sobic002G352800 Sobic002G352800 Sobic003G257100--Sobic002G352800 Sobic009G211400 Sobic009G211400 Sobic003G257100--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic003G257100--Sobic006G030700 Sobic002G409500 Sobic002G409500 Sobic003G257100--Sobic002G409500 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200 Sobic003G320700--Sobic003G301900 Sobic003G320700--Sobic006G104600 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic006G204900 Sobic006G204900 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic001G459600 Sobic001G459600 Sobic001G517800--Sobic001G459600 Sobic001G517800--Sobic003G301900 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic009G011600 Sobic009G011600 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic003G322700--Sobic006G087700 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic001G462500--Sobic002G266000 Sobic001G462500--Sobic006G204900 Sobic001G462500--Sobic003G322700 Sobic004G265800 Sobic004G265800 Sobic001G462500--Sobic004G265800 Sobic001G016700 Sobic001G016700 Sobic001G462500--Sobic001G016700 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic001G462500--Sobic006G087700 Sobic001G462500--Sobic001G207400 Sobic003G301900--Sobic002G146300 Sobic003G301900--Sobic001G517800 Sobic010G139600 Sobic010G139600 Sobic003G301900--Sobic010G139600 Sobic003G190400 Sobic003G190400 Sobic003G301900--Sobic003G190400 Sobic003G301900--Sobic005G149200 Sobic003G301900--Sobic003G320700 Sobic006G219600 Sobic006G219600 Sobic003G301900--Sobic006G219600 Sobic003G301900--Sobic006G087700 Sobic007G190000 Sobic007G190000 Sobic003G301900--Sobic007G190000 Sobic007G210500 Sobic007G210500 Sobic003G051600--Sobic007G210500 Sobic003G051600--Sobic002G266000 Sobic003G051600--Sobic001G282600 Sobic006G214200 Sobic006G214200 Sobic003G051600--Sobic006G214200 Sobic003G051600--Sobic006G064600 Sobic003G051600--Sobic003G320700 Sobic006G233500 Sobic006G233500 Sobic003G051600--Sobic006G233500 Sobic003G051600--Sobic001G462500 Sobic001G409300 Sobic001G409300 Sobic003G051600--Sobic001G409300 Sobic001G305500--Sobic006G104600 Sobic002G262300 Sobic002G262300 Sobic001G305500--Sobic002G262300 Sobic001G305500--Sobic001G207400 Sobic001G305500--Sobic003G398100 Sobic001G305500--Sobic002G266000 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic001G305500--Sobic007G210500 Sobic001G305500--Sobic006G199000
Octagon: transcription factors


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