Gene annotation
Transcriptome id Sobic.003G110400.1
Synonym Sb03g009290, URH2
Functional annotation inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed
UniProt C5XFP4
Pfam PF01156
Panther DB PTHR12304 PTHR12304:SF1
NCBI CDD KOG2938; Predicted inosine-uridine preferring nucleoside hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05620 : uridine-ribohydrolase 2
RAP-DB (Rice) LOC_Os03g31170.1 : inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023900 , Zm00025a035374
Brachypodium PNT77077 , PNT77076 , KQK20910
Barley HORVU5Hr1G013670.1 , HORVU5Hr1G013670.2 , HORVU7Hr1G034800.1 , HORVU6Hr1G062020.2 , HORVU6Hr1G062020.1 , HORVU6Hr1G021030.1 , HORVU6Hr1G021030.2 , HORVU6Hr1G021030.3 , HORVU2Hr1G037600.1 , HORVU2Hr1G037600.2 , HORVU2Hr1G037600.3 , HORVU1Hr1G059190.4 , HORVU1Hr1G059190.3 , HORVU1Hr1G059190.2 , HORVU1Hr1G059190.1 , HORVU4Hr1G067860.1 , HORVU3Hr1G015700.1 , HORVU3Hr1G015700.2
Wheat TraesCS3B02G102800 , TraesCS3B02G102800 , TraesCS3A02G087400 , TraesCS3D02G087500
Populus -


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cDNA sequences
Sobic.003G110400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
2 Sobic.008G032600 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
3 Sobic.010G049100 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
4 Sobic.006G160300 DNA binding protein, putative, expressed -
5 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
6 Sobic.008G179900 cysteine synthase, putative, expressed K01738: cysteine synthase
7 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
8 Sobic.001G053000 small multi-drug export protein, putative, expressed -
9 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
10 Sobic.001G296900 dual specificity protein phosphatase, putative, expressed -
11 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
12 Sobic.010G210500 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
13 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
15 Sobic.001G219300 lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
16 Sobic.002G335000 UPF0041 domain containing protein, putative, expressed -
17 Sobic.001G511900 tetratricopeptide repeat domain containing protein, expressed -
18 Sobic.008G033500 nucleolar GTPase, putative, expressed -
19 Sobic.008G156700 phosphoribulokinase/Uridine kinase family protein, expressed -
20 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18


Gene co-expression network
sample Sobic003G110400 Sobic003G110400 Sobic001G014800 Sobic001G014800 Sobic003G110400--Sobic001G014800 Sobic008G032600 Sobic008G032600 Sobic003G110400--Sobic008G032600 Sobic010G049100 Sobic010G049100 Sobic003G110400--Sobic010G049100 Sobic006G160300 Sobic006G160300 Sobic003G110400--Sobic006G160300 Sobic010G277100 Sobic010G277100 Sobic003G110400--Sobic010G277100 Sobic008G179900 Sobic008G179900 Sobic003G110400--Sobic008G179900 Sobic004G121300 Sobic004G121300 Sobic003G110400--Sobic004G121300 Sobic001G053000 Sobic001G053000 Sobic003G110400--Sobic001G053000 Sobic002G111200 Sobic002G111200 Sobic003G110400--Sobic002G111200 Sobic010G020400 Sobic010G020400 Sobic001G014800--Sobic010G020400 Sobic009G084000 Sobic009G084000 Sobic001G014800--Sobic009G084000 Sobic008G033500 Sobic008G033500 Sobic001G014800--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic001G014800--Sobic001G333100 Sobic009G192000 Sobic009G192000 Sobic001G014800--Sobic009G192000 Sobic002G047700 Sobic002G047700 Sobic001G014800--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic001G014800--Sobic006G180000 Sobic006G201800 Sobic006G201800 Sobic001G014800--Sobic006G201800 Sobic002G263600 Sobic002G263600 Sobic001G014800--Sobic002G263600 Sobic008G032600--Sobic010G049100 Sobic008G156700 Sobic008G156700 Sobic008G032600--Sobic008G156700 Sobic004G080100 Sobic004G080100 Sobic008G032600--Sobic004G080100 Sobic009G133600 Sobic009G133600 Sobic008G032600--Sobic009G133600 Sobic005G168600 Sobic005G168600 Sobic008G032600--Sobic005G168600 Sobic008G032600--Sobic003G110400 Sobic003G055700 Sobic003G055700 Sobic008G032600--Sobic003G055700 Sobic006G244700 Sobic006G244700 Sobic008G032600--Sobic006G244700 Sobic008G032600--Sobic008G033500 Sobic010G049100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic010G049100--Sobic003G246700 Sobic010G049100--Sobic001G014800 Sobic010G049100--Sobic008G032600 Sobic010G049100--Sobic004G121300 Sobic002G226900 Sobic002G226900 Sobic010G049100--Sobic002G226900 Sobic004G296400 Sobic004G296400 Sobic010G049100--Sobic004G296400 Sobic009G139900 Sobic009G139900 Sobic010G049100--Sobic009G139900 Sobic004G136300 Sobic004G136300 Sobic010G049100--Sobic004G136300 Sobic003G195000 Sobic003G195000 Sobic006G160300--Sobic003G195000 Sobic006G199200 Sobic006G199200 Sobic006G160300--Sobic006G199200 Sobic001G121200 Sobic001G121200 Sobic006G160300--Sobic001G121200 Sobic001G268200 Sobic001G268200 Sobic006G160300--Sobic001G268200 Sobic009G056200 Sobic009G056200 Sobic006G160300--Sobic009G056200 Sobic003G086900 Sobic003G086900 Sobic006G160300--Sobic003G086900 Sobic007G193700 Sobic007G193700 Sobic006G160300--Sobic007G193700 Sobic010G147100 Sobic010G147100 Sobic006G160300--Sobic010G147100 Sobic003G220800 Sobic003G220800 Sobic006G160300--Sobic003G220800 Sobic001G364600 Sobic001G364600 Sobic010G277100--Sobic001G364600 Sobic010G277100--Sobic005G168600 Sobic003G077900 Sobic003G077900 Sobic010G277100--Sobic003G077900 Sobic001G417900 Sobic001G417900 Sobic010G277100--Sobic001G417900 Sobic010G277100--Sobic001G053000 Sobic010G277100--Sobic002G111200 Sobic010G277100--Sobic010G049100 Sobic010G277100--Sobic001G014800 Sobic007G188300 Sobic007G188300 Sobic010G277100--Sobic007G188300 Sobic008G179900--Sobic004G080100 Sobic004G225100 Sobic004G225100 Sobic008G179900--Sobic004G225100 Sobic004G329300 Sobic004G329300 Sobic008G179900--Sobic004G329300 Sobic008G179900--Sobic009G139900 Sobic001G462500 Sobic001G462500 Sobic008G179900--Sobic001G462500 Sobic008G179900--Sobic003G110400 Sobic008G074400 Sobic008G074400 Sobic008G179900--Sobic008G074400 Sobic001G016700 Sobic001G016700 Sobic008G179900--Sobic001G016700 Sobic002G111000 Sobic002G111000 Sobic008G179900--Sobic002G111000 Sobic004G121300--Sobic001G014800 Sobic004G121300--Sobic010G049100 Sobic004G121300--Sobic001G333100 Sobic001G434200 Sobic001G434200 Sobic004G121300--Sobic001G434200 Sobic004G121300--Sobic008G033500 Sobic002G131500 Sobic002G131500 Sobic004G121300--Sobic002G131500 Sobic006G274800 Sobic006G274800 Sobic004G121300--Sobic006G274800 Sobic005G111900 Sobic005G111900 Sobic004G121300--Sobic005G111900 Sobic010G131900 Sobic010G131900 Sobic004G121300--Sobic010G131900 Sobic001G043800 Sobic001G043800 Sobic001G053000--Sobic001G043800 Sobic001G053000--Sobic010G277100 Sobic002G343400 Sobic002G343400 Sobic001G053000--Sobic002G343400 Sobic003G314500 Sobic003G314500 Sobic001G053000--Sobic003G314500 Sobic007G062500 Sobic007G062500 Sobic001G053000--Sobic007G062500 Sobic008G144800 Sobic008G144800 Sobic001G053000--Sobic008G144800 Sobic002G281800 Sobic002G281800 Sobic001G053000--Sobic002G281800 Sobic001G053000--Sobic001G417900 Sobic010G140600 Sobic010G140600 Sobic001G053000--Sobic010G140600 Sobic001G339500 Sobic001G339500 Sobic002G111200--Sobic001G339500 Sobic002G111200--Sobic001G014800 Sobic001G219300 Sobic001G219300 Sobic002G111200--Sobic001G219300 Sobic002G339600 Sobic002G339600 Sobic002G111200--Sobic002G339600 Sobic002G111200--Sobic010G277100 Sobic008G118900 Sobic008G118900 Sobic002G111200--Sobic008G118900 Sobic002G309900 Sobic002G309900 Sobic002G111200--Sobic002G309900 Sobic002G209400 Sobic002G209400 Sobic002G111200--Sobic002G209400 Sobic009G004600 Sobic009G004600 Sobic002G111200--Sobic009G004600
Octagon: transcription factors


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