Gene annotation
Transcriptome id Sobic.002G335000.2,Sobic.002G335000.1
Synonym Sb02g036050
Functional annotation UPF0041 domain containing protein, putative, expressed
UniProt C5XAY5
Pfam PF03650
Panther DB PTHR14154 PTHR14154:SF2
NCBI CDD KOG1589; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0006850; mitochondrial pyruvate transmembrane transport GO:0005743mitochondrial inner membrane


Orthologs (automatic annotation)
TAIR AT4G22310 : Uncharacterised protein family (UPF0041)
RAP-DB (Rice) LOC_Os07g26700.1 : UPF0041 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a054905 , Zm00025a029902
Brachypodium KQJ83317 , KQK15823
Barley HORVU7Hr1G001560.1 , HORVU7Hr1G001560.2 , HORVU2Hr1G042180.5 , HORVU2Hr1G042180.4 , HORVU2Hr1G042180.2 , HORVU2Hr1G042180.1
Wheat TraesCS7A02G015100 , TraesCS7D02G012600 , TraesCS2B02G236000 , TraesCS2D02G216600 , TraesCS4A02G480900 , TraesCS7A02G016000 , TraesCS7D02G012200 , TraesCS2A02G209800 , TraesCS2A02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G033700 expressed protein -
2 Sobic.003G354600 csAtPR5, putative, expressed -
3 Sobic.010G210500 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
4 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
5 Sobic.003G373500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
6 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
7 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
8 Sobic.002G181600 expressed protein -
9 Sobic.002G376600 paramyosin, putative, expressed -
10 Sobic.002G167500 expressed protein -
11 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
12 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
13 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
14 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
15 Sobic.002G152600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
16 Sobic.005G111700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
17 Sobic.007G062000 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
18 Sobic.004G130932 - -
19 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
20 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -


Gene co-expression network
sample Sobic002G335000 Sobic002G335000 Sobic004G033700 Sobic004G033700 Sobic002G335000--Sobic004G033700 Sobic003G354600 Sobic003G354600 Sobic002G335000--Sobic003G354600 Sobic010G210500 Sobic010G210500 Sobic002G335000--Sobic010G210500 Sobic001G136800 Sobic001G136800 Sobic002G335000--Sobic001G136800 Sobic003G373500 Sobic003G373500 Sobic002G335000--Sobic003G373500 Sobic006G274800 Sobic006G274800 Sobic002G335000--Sobic006G274800 Sobic004G054100 Sobic004G054100 Sobic002G335000--Sobic004G054100 Sobic002G181600 Sobic002G181600 Sobic002G335000--Sobic002G181600 Sobic002G376600 Sobic002G376600 Sobic002G335000--Sobic002G376600 Sobic004G033700--Sobic002G335000 Sobic004G033700--Sobic003G354600 Sobic004G033700--Sobic006G274800 Sobic004G033700--Sobic002G181600 Sobic004G054400 Sobic004G054400 Sobic004G033700--Sobic004G054400 Sobic001G078400 Sobic001G078400 Sobic004G033700--Sobic001G078400 Sobic010G023700 Sobic010G023700 Sobic004G033700--Sobic010G023700 Sobic004G033700--Sobic001G136800 Sobic004G016400 Sobic004G016400 Sobic004G033700--Sobic004G016400 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic002G325300 Sobic002G325300 Sobic010G210500--Sobic002G325300 Sobic010G147100 Sobic010G147100 Sobic010G210500--Sobic010G147100 Sobic003G264100 Sobic003G264100 Sobic010G210500--Sobic003G264100 Sobic009G255700 Sobic009G255700 Sobic010G210500--Sobic009G255700 Sobic010G210500--Sobic003G354600 Sobic010G210500--Sobic003G119600 Sobic007G201500 Sobic007G201500 Sobic010G210500--Sobic007G201500 Sobic007G172200 Sobic007G172200 Sobic010G210500--Sobic007G172200 Sobic001G207000 Sobic001G207000 Sobic010G210500--Sobic001G207000 Sobic001G136800--Sobic003G354600 Sobic005G199400 Sobic005G199400 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600 Sobic003G373500--Sobic003G264100 Sobic003G107500 Sobic003G107500 Sobic003G373500--Sobic003G107500 Sobic003G373500--Sobic002G335000 Sobic001G333100 Sobic001G333100 Sobic003G373500--Sobic001G333100 Sobic004G252900 Sobic004G252900 Sobic003G373500--Sobic004G252900 Sobic003G373500--Sobic003G311900 Sobic010G239900 Sobic010G239900 Sobic003G373500--Sobic010G239900 Sobic002G311100 Sobic002G311100 Sobic003G373500--Sobic002G311100 Sobic010G226000 Sobic010G226000 Sobic003G373500--Sobic010G226000 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic006G274800--Sobic003G354600 Sobic002G131500 Sobic002G131500 Sobic006G274800--Sobic002G131500 Sobic006G274800--Sobic002G335000 Sobic006G274800--Sobic005G199400 Sobic004G121300 Sobic004G121300 Sobic006G274800--Sobic004G121300 Sobic006G274800--Sobic004G033700 Sobic008G087900 Sobic008G087900 Sobic006G274800--Sobic008G087900 Sobic001G031100 Sobic001G031100 Sobic004G054100--Sobic001G031100 Sobic004G054100--Sobic003G354600 Sobic009G084000 Sobic009G084000 Sobic004G054100--Sobic009G084000 Sobic010G020400 Sobic010G020400 Sobic004G054100--Sobic010G020400 Sobic002G359400 Sobic002G359400 Sobic004G054100--Sobic002G359400 Sobic001G007000 Sobic001G007000 Sobic004G054100--Sobic001G007000 Sobic002G047700 Sobic002G047700 Sobic004G054100--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic004G054100--Sobic006G180000 Sobic004G054100--Sobic001G355800 Sobic002G181600--Sobic006G274800 Sobic002G181600--Sobic003G354600 Sobic001G532600 Sobic001G532600 Sobic002G181600--Sobic001G532600 Sobic002G181600--Sobic002G376600 Sobic002G181600--Sobic008G087900 Sobic002G181600--Sobic001G136800 Sobic006G039400 Sobic006G039400 Sobic002G181600--Sobic006G039400 Sobic002G181600--Sobic004G033700 Sobic002G181600--Sobic002G335000 Sobic002G376600--Sobic001G532600 Sobic004G120100 Sobic004G120100 Sobic002G376600--Sobic004G120100 Sobic006G222600 Sobic006G222600 Sobic002G376600--Sobic006G222600 Sobic002G376600--Sobic002G181600 Sobic001G198400 Sobic001G198400 Sobic002G376600--Sobic001G198400 Sobic002G098900 Sobic002G098900 Sobic002G376600--Sobic002G098900 Sobic004G163800 Sobic004G163800 Sobic002G376600--Sobic004G163800 Sobic002G376600--Sobic001G136800 Sobic002G376600--Sobic002G335000
Octagon: transcription factors


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