Gene annotation
Transcriptome id Sobic.002G152600.1
Synonym OEP16-3, Sb02g018630, ATOEP16-3
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5X859
Pfam PF02466
Panther DB PTHR14110 PTHR14110:SF7
NCBI CDD KOG3225; Mitochondrial import inner membrane translocase, subunit TIM22
KEGG Orthology K17790; mitochondrial import inner membrane translocase subunit TIM22
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42210 : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RAP-DB (Rice) LOC_Os09g10740.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a046192
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G152600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
2 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
3 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
4 Sobic.003G354600 csAtPR5, putative, expressed -
5 Sobic.003G043300 early fruit mRNA, putative, expressed -
6 Sobic.002G335000 UPF0041 domain containing protein, putative, expressed -
7 Sobic.001G481800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
9 Sobic.001G053000 small multi-drug export protein, putative, expressed -
10 Sobic.002G376600 paramyosin, putative, expressed -
11 Sobic.002G181600 expressed protein -
12 Sobic.001G257700 ribosomal protein S18 containing protein, expressed -
13 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
14 Sobic.006G160300 DNA binding protein, putative, expressed -
15 Sobic.006G201800 scramblase, putative, expressed -
16 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
17 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.005G082200 ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
19 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -


Gene co-expression network
sample Sobic002G152600 Sobic002G152600 Sobic001G136800 Sobic001G136800 Sobic002G152600--Sobic001G136800 Sobic006G175800 Sobic006G175800 Sobic002G152600--Sobic006G175800 Sobic006G274800 Sobic006G274800 Sobic002G152600--Sobic006G274800 Sobic003G354600 Sobic003G354600 Sobic002G152600--Sobic003G354600 Sobic003G043300 Sobic003G043300 Sobic002G152600--Sobic003G043300 Sobic002G335000 Sobic002G335000 Sobic002G152600--Sobic002G335000 Sobic001G481800 Sobic001G481800 Sobic002G152600--Sobic001G481800 Sobic003G220800 Sobic003G220800 Sobic002G152600--Sobic003G220800 Sobic001G053000 Sobic001G053000 Sobic002G152600--Sobic001G053000 Sobic001G136800--Sobic003G354600 Sobic005G199400 Sobic005G199400 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic009G201300 Sobic009G201300 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600 Sobic010G262500 Sobic010G262500 Sobic006G175800--Sobic010G262500 Sobic004G169000 Sobic004G169000 Sobic006G175800--Sobic004G169000 Sobic002G305000 Sobic002G305000 Sobic006G175800--Sobic002G305000 Sobic002G187700 Sobic002G187700 Sobic006G175800--Sobic002G187700 Sobic001G488700 Sobic001G488700 Sobic006G175800--Sobic001G488700 Sobic003G190400 Sobic003G190400 Sobic006G175800--Sobic003G190400 Sobic006G175800--Sobic003G043300 Sobic001G500800 Sobic001G500800 Sobic006G175800--Sobic001G500800 Sobic010G196500 Sobic010G196500 Sobic006G175800--Sobic010G196500 Sobic002G181600 Sobic002G181600 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic006G274800--Sobic003G354600 Sobic002G131500 Sobic002G131500 Sobic006G274800--Sobic002G131500 Sobic006G274800--Sobic002G335000 Sobic006G274800--Sobic005G199400 Sobic004G121300 Sobic004G121300 Sobic006G274800--Sobic004G121300 Sobic004G033700 Sobic004G033700 Sobic006G274800--Sobic004G033700 Sobic008G087900 Sobic008G087900 Sobic006G274800--Sobic008G087900 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic003G354600--Sobic009G201300 Sobic003G354600--Sobic002G181600 Sobic003G354600--Sobic003G220800 Sobic003G043300--Sobic003G220800 Sobic010G074300 Sobic010G074300 Sobic003G043300--Sobic010G074300 Sobic003G043300--Sobic006G175800 Sobic010G251300 Sobic010G251300 Sobic003G043300--Sobic010G251300 Sobic003G043300--Sobic001G136800 Sobic001G257700 Sobic001G257700 Sobic003G043300--Sobic001G257700 Sobic008G077500 Sobic008G077500 Sobic003G043300--Sobic008G077500 Sobic004G040900 Sobic004G040900 Sobic003G043300--Sobic004G040900 Sobic003G051000 Sobic003G051000 Sobic003G043300--Sobic003G051000 Sobic002G335000--Sobic004G033700 Sobic002G335000--Sobic003G354600 Sobic002G335000--Sobic010G210500 Sobic002G335000--Sobic001G136800 Sobic003G373500 Sobic003G373500 Sobic002G335000--Sobic003G373500 Sobic002G335000--Sobic006G274800 Sobic002G335000--Sobic004G054100 Sobic002G335000--Sobic002G181600 Sobic002G376600 Sobic002G376600 Sobic002G335000--Sobic002G376600 Sobic001G481800--Sobic003G220800 Sobic001G481800--Sobic009G201300 Sobic001G481800--Sobic003G354600 Sobic001G481800--Sobic003G119600 Sobic009G239200 Sobic009G239200 Sobic001G481800--Sobic009G239200 Sobic004G034800 Sobic004G034800 Sobic001G481800--Sobic004G034800 Sobic002G167500 Sobic002G167500 Sobic001G481800--Sobic002G167500 Sobic001G481800--Sobic001G136800 Sobic003G086900 Sobic003G086900 Sobic001G481800--Sobic003G086900 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G220800--Sobic003G043300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic006G092400 Sobic006G092400 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000 Sobic001G043800 Sobic001G043800 Sobic001G053000--Sobic001G043800 Sobic010G277100 Sobic010G277100 Sobic001G053000--Sobic010G277100 Sobic002G343400 Sobic002G343400 Sobic001G053000--Sobic002G343400 Sobic003G314500 Sobic003G314500 Sobic001G053000--Sobic003G314500 Sobic007G062500 Sobic007G062500 Sobic001G053000--Sobic007G062500 Sobic008G144800 Sobic008G144800 Sobic001G053000--Sobic008G144800 Sobic002G281800 Sobic002G281800 Sobic001G053000--Sobic002G281800 Sobic001G417900 Sobic001G417900 Sobic001G053000--Sobic001G417900 Sobic010G140600 Sobic010G140600 Sobic001G053000--Sobic010G140600
Octagon: transcription factors


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