Gene annotation
Transcriptome id Sobic.002G181600.1,Sobic.002G181600.2
Synonym Sb02g022990
Functional annotation expressed protein
UniProt A0A1B6QC39
Pfam -
Panther DB PTHR35277
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57000 : -
RAP-DB (Rice) LOC_Os09g19910.1 : expressed protein
MaizeGDB (Corn) Zm00025a046684
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G181600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
2 Sobic.003G354600 csAtPR5, putative, expressed -
3 Sobic.001G532600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
4 Sobic.002G376600 paramyosin, putative, expressed -
5 Sobic.008G087900 expressed protein -
6 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
7 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
8 Sobic.004G033700 expressed protein -
9 Sobic.002G335000 UPF0041 domain containing protein, putative, expressed -
10 Sobic.004G079800 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
11 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
12 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
13 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
14 Sobic.005G199400 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
15 Sobic.001G333500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
16 Sobic.002G170200 zinc finger family protein, putative, expressed -
17 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
18 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
19 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
20 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -


Gene co-expression network
sample Sobic002G181600 Sobic002G181600 Sobic006G274800 Sobic006G274800 Sobic002G181600--Sobic006G274800 Sobic003G354600 Sobic003G354600 Sobic002G181600--Sobic003G354600 Sobic001G532600 Sobic001G532600 Sobic002G181600--Sobic001G532600 Sobic002G376600 Sobic002G376600 Sobic002G181600--Sobic002G376600 Sobic008G087900 Sobic008G087900 Sobic002G181600--Sobic008G087900 Sobic001G136800 Sobic001G136800 Sobic002G181600--Sobic001G136800 Sobic006G039400 Sobic006G039400 Sobic002G181600--Sobic006G039400 Sobic004G033700 Sobic004G033700 Sobic002G181600--Sobic004G033700 Sobic002G335000 Sobic002G335000 Sobic002G181600--Sobic002G335000 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic006G274800--Sobic003G354600 Sobic002G131500 Sobic002G131500 Sobic006G274800--Sobic002G131500 Sobic006G274800--Sobic002G335000 Sobic005G199400 Sobic005G199400 Sobic006G274800--Sobic005G199400 Sobic004G121300 Sobic004G121300 Sobic006G274800--Sobic004G121300 Sobic006G274800--Sobic004G033700 Sobic006G274800--Sobic008G087900 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic001G532600--Sobic002G376600 Sobic004G130300 Sobic004G130300 Sobic001G532600--Sobic004G130300 Sobic007G017800 Sobic007G017800 Sobic001G532600--Sobic007G017800 Sobic007G125000 Sobic007G125000 Sobic001G532600--Sobic007G125000 Sobic001G014200 Sobic001G014200 Sobic001G532600--Sobic001G014200 Sobic001G532600--Sobic002G181600 Sobic010G041400 Sobic010G041400 Sobic001G532600--Sobic010G041400 Sobic010G154900 Sobic010G154900 Sobic001G532600--Sobic010G154900 Sobic009G192300 Sobic009G192300 Sobic001G532600--Sobic009G192300 Sobic002G376600--Sobic001G532600 Sobic004G120100 Sobic004G120100 Sobic002G376600--Sobic004G120100 Sobic006G222600 Sobic006G222600 Sobic002G376600--Sobic006G222600 Sobic002G376600--Sobic002G181600 Sobic001G198400 Sobic001G198400 Sobic002G376600--Sobic001G198400 Sobic002G098900 Sobic002G098900 Sobic002G376600--Sobic002G098900 Sobic004G163800 Sobic004G163800 Sobic002G376600--Sobic004G163800 Sobic002G376600--Sobic001G136800 Sobic002G376600--Sobic002G335000 Sobic006G160100 Sobic006G160100 Sobic008G087900--Sobic006G160100 Sobic001G434200 Sobic001G434200 Sobic008G087900--Sobic001G434200 Sobic005G111900 Sobic005G111900 Sobic008G087900--Sobic005G111900 Sobic007G028500 Sobic007G028500 Sobic008G087900--Sobic007G028500 Sobic008G087900--Sobic002G181600 Sobic002G047500 Sobic002G047500 Sobic008G087900--Sobic002G047500 Sobic008G087900--Sobic006G274800 Sobic008G087900--Sobic006G039400 Sobic001G412100 Sobic001G412100 Sobic008G087900--Sobic001G412100 Sobic001G136800--Sobic003G354600 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic001G237600 Sobic001G237600 Sobic006G039400--Sobic001G237600 Sobic003G182300 Sobic003G182300 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic007G087000 Sobic007G087000 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic004G033700--Sobic002G335000 Sobic004G033700--Sobic003G354600 Sobic004G033700--Sobic006G274800 Sobic004G033700--Sobic002G181600 Sobic004G054400 Sobic004G054400 Sobic004G033700--Sobic004G054400 Sobic001G078400 Sobic001G078400 Sobic004G033700--Sobic001G078400 Sobic010G023700 Sobic010G023700 Sobic004G033700--Sobic010G023700 Sobic004G033700--Sobic001G136800 Sobic004G016400 Sobic004G016400 Sobic004G033700--Sobic004G016400 Sobic002G335000--Sobic004G033700 Sobic002G335000--Sobic003G354600 Sobic002G335000--Sobic010G210500 Sobic002G335000--Sobic001G136800 Sobic003G373500 Sobic003G373500 Sobic002G335000--Sobic003G373500 Sobic002G335000--Sobic006G274800 Sobic002G335000--Sobic004G054100 Sobic002G335000--Sobic002G181600 Sobic002G335000--Sobic002G376600
Octagon: transcription factors


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