Gene annotation
Transcriptome id Sobic.004G033700.4,Sobic.004G033700.5,Sobic.004G033700.3
Synonym Sb04g002900
Functional annotation expressed protein
UniProt A0A1Z5RKX9 , A0A1Z5RLT4 , A0A1Z5RKR9
Pfam PF12274
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g48730.1,LOC_Os04g48730.3 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G033700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G335000 UPF0041 domain containing protein, putative, expressed -
2 Sobic.003G354600 csAtPR5, putative, expressed -
3 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
4 Sobic.002G181600 expressed protein -
5 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
6 Sobic.001G078400 OsSigP2 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
7 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
8 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
9 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
10 Sobic.002G376600 paramyosin, putative, expressed -
11 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
12 Sobic.001G025400 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
13 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
14 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
15 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
16 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
17 Sobic.007G123500 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
18 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
19 Sobic.005G149400 maf, putative, expressed K06287: septum formation protein
20 Sobic.006G097200 cation transport regulator-like protein 1, putative, expressed -


Gene co-expression network
sample Sobic004G033700 Sobic004G033700 Sobic002G335000 Sobic002G335000 Sobic004G033700--Sobic002G335000 Sobic003G354600 Sobic003G354600 Sobic004G033700--Sobic003G354600 Sobic006G274800 Sobic006G274800 Sobic004G033700--Sobic006G274800 Sobic002G181600 Sobic002G181600 Sobic004G033700--Sobic002G181600 Sobic004G054400 Sobic004G054400 Sobic004G033700--Sobic004G054400 Sobic001G078400 Sobic001G078400 Sobic004G033700--Sobic001G078400 Sobic010G023700 Sobic010G023700 Sobic004G033700--Sobic010G023700 Sobic001G136800 Sobic001G136800 Sobic004G033700--Sobic001G136800 Sobic004G016400 Sobic004G016400 Sobic004G033700--Sobic004G016400 Sobic002G335000--Sobic004G033700 Sobic002G335000--Sobic003G354600 Sobic010G210500 Sobic010G210500 Sobic002G335000--Sobic010G210500 Sobic002G335000--Sobic001G136800 Sobic003G373500 Sobic003G373500 Sobic002G335000--Sobic003G373500 Sobic002G335000--Sobic006G274800 Sobic004G054100 Sobic004G054100 Sobic002G335000--Sobic004G054100 Sobic002G335000--Sobic002G181600 Sobic002G376600 Sobic002G376600 Sobic002G335000--Sobic002G376600 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic006G274800--Sobic003G354600 Sobic002G131500 Sobic002G131500 Sobic006G274800--Sobic002G131500 Sobic006G274800--Sobic002G335000 Sobic005G199400 Sobic005G199400 Sobic006G274800--Sobic005G199400 Sobic004G121300 Sobic004G121300 Sobic006G274800--Sobic004G121300 Sobic006G274800--Sobic004G033700 Sobic008G087900 Sobic008G087900 Sobic006G274800--Sobic008G087900 Sobic002G181600--Sobic006G274800 Sobic002G181600--Sobic003G354600 Sobic001G532600 Sobic001G532600 Sobic002G181600--Sobic001G532600 Sobic002G181600--Sobic002G376600 Sobic002G181600--Sobic008G087900 Sobic002G181600--Sobic001G136800 Sobic006G039400 Sobic006G039400 Sobic002G181600--Sobic006G039400 Sobic002G181600--Sobic004G033700 Sobic002G181600--Sobic002G335000 Sobic001G124800 Sobic001G124800 Sobic004G054400--Sobic001G124800 Sobic001G309300 Sobic001G309300 Sobic004G054400--Sobic001G309300 Sobic003G387100 Sobic003G387100 Sobic004G054400--Sobic003G387100 Sobic001G032700 Sobic001G032700 Sobic004G054400--Sobic001G032700 Sobic008G001900 Sobic008G001900 Sobic004G054400--Sobic008G001900 Sobic001G516901 Sobic001G516901 Sobic004G054400--Sobic001G516901 Sobic001G512500 Sobic001G512500 Sobic004G054400--Sobic001G512500 Sobic004G336000 Sobic004G336000 Sobic004G054400--Sobic004G336000 Sobic006G010900 Sobic006G010900 Sobic004G054400--Sobic006G010900 Sobic002G030500 Sobic002G030500 Sobic001G078400--Sobic002G030500 Sobic004G026700 Sobic004G026700 Sobic001G078400--Sobic004G026700 Sobic001G078400--Sobic004G033700 Sobic008G066100 Sobic008G066100 Sobic001G078400--Sobic008G066100 Sobic007G029700 Sobic007G029700 Sobic001G078400--Sobic007G029700 Sobic002G000700 Sobic002G000700 Sobic001G078400--Sobic002G000700 Sobic006G147300 Sobic006G147300 Sobic001G078400--Sobic006G147300 Sobic001G338700 Sobic001G338700 Sobic001G078400--Sobic001G338700 Sobic008G015100 Sobic008G015100 Sobic001G078400--Sobic008G015100 Sobic002G051100 Sobic002G051100 Sobic010G023700--Sobic002G051100 Sobic009G063100 Sobic009G063100 Sobic010G023700--Sobic009G063100 Sobic001G129000 Sobic001G129000 Sobic010G023700--Sobic001G129000 Sobic004G272100 Sobic004G272100 Sobic010G023700--Sobic004G272100 Sobic004G125700 Sobic004G125700 Sobic010G023700--Sobic004G125700 Sobic001G102800 Sobic001G102800 Sobic010G023700--Sobic001G102800 Sobic007G140800 Sobic007G140800 Sobic010G023700--Sobic007G140800 Sobic002G277100 Sobic002G277100 Sobic010G023700--Sobic002G277100 Sobic001G020100 Sobic001G020100 Sobic010G023700--Sobic001G020100 Sobic001G136800--Sobic003G354600 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600 Sobic005G149400 Sobic005G149400 Sobic004G016400--Sobic005G149400 Sobic001G025400 Sobic001G025400 Sobic004G016400--Sobic001G025400 Sobic004G016400--Sobic003G387100 Sobic004G307400 Sobic004G307400 Sobic004G016400--Sobic004G307400 Sobic009G030900 Sobic009G030900 Sobic004G016400--Sobic009G030900 Sobic004G016400--Sobic001G309300 Sobic009G059300 Sobic009G059300 Sobic004G016400--Sobic009G059300 Sobic004G016400--Sobic004G336000 Sobic001G291900 Sobic001G291900 Sobic004G016400--Sobic001G291900
Octagon: transcription factors


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