Gene annotation
Transcriptome id Sobic.007G033800.1,Sobic.007G033800.2
Synonym ILR3, Sb07g002900, bHLH105
Functional annotation basic helix-loop-helix DND-binding domain containing protein, expressed
UniProt A0A1B6PFC8 , A0A1B6PFI2
Pfam PF00010
Panther DB PTHR23042 PTHR23042:SF60
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54680 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g04390.2 : basic helix-loop-helix DND-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030159 , Zm00025a055263 , Zm00025a033666
Brachypodium KQJ94998
Barley HORVU7Hr1G073310.4 , HORVU7Hr1G073310.5 , HORVU7Hr1G073310.6 , HORVU7Hr1G073310.3 , HORVU7Hr1G073310.2 , HORVU7Hr1G073310.1
Wheat TraesCS7A02G307700 , TraesCS7D02G304500 , TraesCS7B02G208000
Populus -


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cDNA sequences
Sobic.007G033800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G033200 expressed protein -
2 Sobic.001G339500 expressed protein -
3 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
4 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
5 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
6 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
7 Sobic.001G071800 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
8 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
9 Sobic.002G421900 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
10 Sobic.001G292700 crcB-like protein, expressed -
11 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
12 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
13 Sobic.003G354600 csAtPR5, putative, expressed -
14 Sobic.004G070700 GA16396-PA, putative, expressed -
15 Sobic.004G295300 expressed protein -
16 Sobic.004G203400 repressor of RNA polymerase III transcription MAF1, putative, expressed -
17 Sobic.003G214500 ubiquitin-like protein SMT3, putative, expressed -
18 Sobic.002G294500 OsRCI2-11 - Hydrophobic protein OSR8, expressed -
19 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.003G319800 bHelix-loop-helix transcription factor, putative, expressed -


Gene co-expression network
sample Sobic007G033800 Sobic007G033800 Sobic005G033200 Sobic005G033200 Sobic007G033800--Sobic005G033200 Sobic001G339500 Sobic001G339500 Sobic007G033800--Sobic001G339500 Sobic010G023700 Sobic010G023700 Sobic007G033800--Sobic010G023700 Sobic001G031100 Sobic001G031100 Sobic007G033800--Sobic001G031100 Sobic006G173600 Sobic006G173600 Sobic007G033800--Sobic006G173600 Sobic002G339600 Sobic002G339600 Sobic007G033800--Sobic002G339600 Sobic001G071800 Sobic001G071800 Sobic007G033800--Sobic001G071800 Sobic002G111200 Sobic002G111200 Sobic007G033800--Sobic002G111200 Sobic002G421900 Sobic002G421900 Sobic007G033800--Sobic002G421900 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic001G314500 Sobic001G314500 Sobic005G033200--Sobic001G314500 Sobic001G428100 Sobic001G428100 Sobic005G033200--Sobic001G428100 Sobic004G130100 Sobic004G130100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic009G217900 Sobic009G217900 Sobic005G033200--Sobic009G217900 Sobic003G440800 Sobic003G440800 Sobic005G033200--Sobic003G440800 Sobic006G049700 Sobic006G049700 Sobic005G033200--Sobic006G049700 Sobic001G339500--Sobic002G339600 Sobic001G339500--Sobic002G111200 Sobic003G349200 Sobic003G349200 Sobic001G339500--Sobic003G349200 Sobic006G215600 Sobic006G215600 Sobic001G339500--Sobic006G215600 Sobic004G295300 Sobic004G295300 Sobic001G339500--Sobic004G295300 Sobic001G339500--Sobic007G033800 Sobic006G011300 Sobic006G011300 Sobic001G339500--Sobic006G011300 Sobic003G224100 Sobic003G224100 Sobic001G339500--Sobic003G224100 Sobic006G130800 Sobic006G130800 Sobic001G339500--Sobic006G130800 Sobic002G051100 Sobic002G051100 Sobic010G023700--Sobic002G051100 Sobic009G063100 Sobic009G063100 Sobic010G023700--Sobic009G063100 Sobic001G129000 Sobic001G129000 Sobic010G023700--Sobic001G129000 Sobic004G272100 Sobic004G272100 Sobic010G023700--Sobic004G272100 Sobic004G125700 Sobic004G125700 Sobic010G023700--Sobic004G125700 Sobic001G102800 Sobic001G102800 Sobic010G023700--Sobic001G102800 Sobic007G140800 Sobic007G140800 Sobic010G023700--Sobic007G140800 Sobic002G277100 Sobic002G277100 Sobic010G023700--Sobic002G277100 Sobic001G020100 Sobic001G020100 Sobic010G023700--Sobic001G020100 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic009G222500 Sobic009G222500 Sobic001G031100--Sobic009G222500 Sobic001G080700 Sobic001G080700 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G031100--Sobic010G251000 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic003G110800 Sobic003G110800 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic002G339600--Sobic001G339500 Sobic002G339600--Sobic006G215600 Sobic002G339600--Sobic002G111200 Sobic003G443500 Sobic003G443500 Sobic002G339600--Sobic003G443500 Sobic002G128900 Sobic002G128900 Sobic002G339600--Sobic002G128900 Sobic004G151500 Sobic004G151500 Sobic002G339600--Sobic004G151500 Sobic001G257700 Sobic001G257700 Sobic002G339600--Sobic001G257700 Sobic002G309900 Sobic002G309900 Sobic002G339600--Sobic002G309900 Sobic002G339600--Sobic007G033800 Sobic001G071800--Sobic007G033800 Sobic003G214500 Sobic003G214500 Sobic001G071800--Sobic003G214500 Sobic001G292700 Sobic001G292700 Sobic001G071800--Sobic001G292700 Sobic010G027000 Sobic010G027000 Sobic001G071800--Sobic010G027000 Sobic001G071800--Sobic005G033200 Sobic002G358800 Sobic002G358800 Sobic001G071800--Sobic002G358800 Sobic006G254100 Sobic006G254100 Sobic001G071800--Sobic006G254100 Sobic001G460600 Sobic001G460600 Sobic001G071800--Sobic001G460600 Sobic002G358400 Sobic002G358400 Sobic001G071800--Sobic002G358400 Sobic002G111200--Sobic001G339500 Sobic001G014800 Sobic001G014800 Sobic002G111200--Sobic001G014800 Sobic001G219300 Sobic001G219300 Sobic002G111200--Sobic001G219300 Sobic002G111200--Sobic002G339600 Sobic010G277100 Sobic010G277100 Sobic002G111200--Sobic010G277100 Sobic008G118900 Sobic008G118900 Sobic002G111200--Sobic008G118900 Sobic002G111200--Sobic002G309900 Sobic002G209400 Sobic002G209400 Sobic002G111200--Sobic002G209400 Sobic009G004600 Sobic009G004600 Sobic002G111200--Sobic009G004600 Sobic002G403600 Sobic002G403600 Sobic002G421900--Sobic002G403600 Sobic008G052900 Sobic008G052900 Sobic002G421900--Sobic008G052900 Sobic001G512500 Sobic001G512500 Sobic002G421900--Sobic001G512500 Sobic002G421900--Sobic004G151500 Sobic003G370700 Sobic003G370700 Sobic002G421900--Sobic003G370700 Sobic002G421900--Sobic006G215600 Sobic001G003200 Sobic001G003200 Sobic002G421900--Sobic001G003200 Sobic006G120500 Sobic006G120500 Sobic002G421900--Sobic006G120500 Sobic010G067100 Sobic010G067100 Sobic002G421900--Sobic010G067100
Octagon: transcription factors


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