Gene annotation
Transcriptome id Sobic.004G070700.1
Synonym Sb04g005920
Functional annotation GA16396-PA, putative, expressed
UniProt C5XX05
Pfam PF01894
Panther DB PTHR30615 PTHR30615:SF1
NCBI CDD KOG3267; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G21065 : -
RAP-DB (Rice) LOC_Os02g09460.1 : GA16396-PA, putative, expressed
MaizeGDB (Corn) Zm00025a051429 , Zm00025a019350
Brachypodium KQK16734 , KQK16735 , PNT75324 , PNT75323
Barley -
Wheat TraesCS6B02G202600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G354600 csAtPR5, putative, expressed -
2 Sobic.001G193300 TBC domain containing protein, expressed -
3 Sobic.007G171400 low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed K01104: protein-tyrosine phosphatase
4 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
5 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
6 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
7 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
8 Sobic.002G091600 methyltransferase, putative, expressed -
9 Sobic.003G176000 lipase family protein, putative, expressed -
10 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
11 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
12 Sobic.002G309900 cupin 2, conserved barrel domain protein, putative, expressed K14977: ylbA, (S)-ureidoglycine aminohydrolase
13 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
14 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
15 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
16 Sobic.001G257700 ribosomal protein S18 containing protein, expressed -
17 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
18 Sobic.001G333500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
19 Sobic.003G121300 expressed protein K15170: mediator of RNA polymerase II transcription subunit 27
20 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -


Gene co-expression network
sample Sobic004G070700 Sobic004G070700 Sobic003G354600 Sobic003G354600 Sobic004G070700--Sobic003G354600 Sobic001G193300 Sobic001G193300 Sobic004G070700--Sobic001G193300 Sobic007G171400 Sobic007G171400 Sobic004G070700--Sobic007G171400 Sobic008G168300 Sobic008G168300 Sobic004G070700--Sobic008G168300 Sobic006G185100 Sobic006G185100 Sobic004G070700--Sobic006G185100 Sobic002G111200 Sobic002G111200 Sobic004G070700--Sobic002G111200 Sobic002G325300 Sobic002G325300 Sobic004G070700--Sobic002G325300 Sobic002G091600 Sobic002G091600 Sobic004G070700--Sobic002G091600 Sobic003G176000 Sobic003G176000 Sobic004G070700--Sobic003G176000 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic009G068500 Sobic009G068500 Sobic001G193300--Sobic009G068500 Sobic008G089100 Sobic008G089100 Sobic001G193300--Sobic008G089100 Sobic004G257100 Sobic004G257100 Sobic001G193300--Sobic004G257100 Sobic002G359400 Sobic002G359400 Sobic001G193300--Sobic002G359400 Sobic008G033500 Sobic008G033500 Sobic001G193300--Sobic008G033500 Sobic004G202500 Sobic004G202500 Sobic001G193300--Sobic004G202500 Sobic001G193300--Sobic003G176000 Sobic001G007000 Sobic001G007000 Sobic001G193300--Sobic001G007000 Sobic008G124900 Sobic008G124900 Sobic001G193300--Sobic008G124900 Sobic001G516901 Sobic001G516901 Sobic007G171400--Sobic001G516901 Sobic007G136200 Sobic007G136200 Sobic007G171400--Sobic007G136200 Sobic003G229300 Sobic003G229300 Sobic007G171400--Sobic003G229300 Sobic006G173600 Sobic006G173600 Sobic007G171400--Sobic006G173600 Sobic004G054400 Sobic004G054400 Sobic007G171400--Sobic004G054400 Sobic004G178100 Sobic004G178100 Sobic007G171400--Sobic004G178100 Sobic001G048100 Sobic001G048100 Sobic007G171400--Sobic001G048100 Sobic008G115900 Sobic008G115900 Sobic007G171400--Sobic008G115900 Sobic008G062400 Sobic008G062400 Sobic007G171400--Sobic008G062400 Sobic004G355700 Sobic004G355700 Sobic008G168300--Sobic004G355700 Sobic001G017300 Sobic001G017300 Sobic008G168300--Sobic001G017300 Sobic002G121600 Sobic002G121600 Sobic008G168300--Sobic002G121600 Sobic005G045000 Sobic005G045000 Sobic008G168300--Sobic005G045000 Sobic008G168300--Sobic003G229300 Sobic001G468700 Sobic001G468700 Sobic008G168300--Sobic001G468700 Sobic010G085100 Sobic010G085100 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800 Sobic006G185100--Sobic002G325300 Sobic003G253600 Sobic003G253600 Sobic006G185100--Sobic003G253600 Sobic002G257750 Sobic002G257750 Sobic006G185100--Sobic002G257750 Sobic004G140600 Sobic004G140600 Sobic006G185100--Sobic004G140600 Sobic001G392300 Sobic001G392300 Sobic006G185100--Sobic001G392300 Sobic005G059800 Sobic005G059800 Sobic006G185100--Sobic005G059800 Sobic006G185100--Sobic003G119600 Sobic001G080700 Sobic001G080700 Sobic006G185100--Sobic001G080700 Sobic008G070800 Sobic008G070800 Sobic006G185100--Sobic008G070800 Sobic001G339500 Sobic001G339500 Sobic002G111200--Sobic001G339500 Sobic001G014800 Sobic001G014800 Sobic002G111200--Sobic001G014800 Sobic001G219300 Sobic001G219300 Sobic002G111200--Sobic001G219300 Sobic002G339600 Sobic002G339600 Sobic002G111200--Sobic002G339600 Sobic010G277100 Sobic010G277100 Sobic002G111200--Sobic010G277100 Sobic008G118900 Sobic008G118900 Sobic002G111200--Sobic008G118900 Sobic002G309900 Sobic002G309900 Sobic002G111200--Sobic002G309900 Sobic002G209400 Sobic002G209400 Sobic002G111200--Sobic002G209400 Sobic009G004600 Sobic009G004600 Sobic002G111200--Sobic009G004600 Sobic002G325300--Sobic006G185100 Sobic001G194200 Sobic001G194200 Sobic002G325300--Sobic001G194200 Sobic006G252900 Sobic006G252900 Sobic002G325300--Sobic006G252900 Sobic003G247500 Sobic003G247500 Sobic002G325300--Sobic003G247500 Sobic002G325300--Sobic003G119600 Sobic006G041600 Sobic006G041600 Sobic002G325300--Sobic006G041600 Sobic008G001200 Sobic008G001200 Sobic002G325300--Sobic008G001200 Sobic004G244900 Sobic004G244900 Sobic002G325300--Sobic004G244900 Sobic009G256400 Sobic009G256400 Sobic002G325300--Sobic009G256400 Sobic004G193700 Sobic004G193700 Sobic002G091600--Sobic004G193700 Sobic003G110800 Sobic003G110800 Sobic002G091600--Sobic003G110800 Sobic002G091600--Sobic007G136200 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic001G530900 Sobic001G530900 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic005G106600 Sobic005G106600 Sobic002G091600--Sobic005G106600 Sobic004G131800 Sobic004G131800 Sobic003G176000--Sobic004G131800 Sobic002G344000 Sobic002G344000 Sobic003G176000--Sobic002G344000 Sobic002G211800 Sobic002G211800 Sobic003G176000--Sobic002G211800 Sobic002G170200 Sobic002G170200 Sobic003G176000--Sobic002G170200 Sobic010G032900 Sobic010G032900 Sobic003G176000--Sobic010G032900 Sobic003G176000--Sobic003G253600 Sobic003G176000--Sobic002G325300 Sobic002G294800 Sobic002G294800 Sobic003G176000--Sobic002G294800 Sobic003G176000--Sobic005G059800
Octagon: transcription factors


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