Gene annotation
Transcriptome id Sobic.007G171400.1
Synonym Sb07g024360
Functional annotation low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed
UniProt C5YN94
Pfam PF01451
Panther DB PTHR11717 PTHR11717:SF7
NCBI CDD KOG3217; Protein tyrosine phosphatase
KEGG Orthology K01104; protein-tyrosine phosphatase
Gene Ontology GO:0006470; protein dephosphorylation GO:0004725protein tyrosine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G44620 : protein tyrosine phosphatases;protein tyrosine phosphatases
RAP-DB (Rice) LOC_Os08g44320.1 : low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed
MaizeGDB (Corn) Zm00025a005619
Brachypodium KQJ99343
Barley HORVU7Hr1G058760.9 , HORVU7Hr1G058760.8 , HORVU7Hr1G058760.3 , HORVU7Hr1G058760.2 , HORVU7Hr1G058760.5 , HORVU7Hr1G058760.4 , HORVU7Hr1G058760.7 , HORVU7Hr1G058760.6
Wheat TraesCS7B02G175600 , TraesCS7B02G175600 , TraesCS7A02G278000 , TraesCS7D02G277800
Populus -


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cDNA sequences
Sobic.007G171400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G516901 - -
2 Sobic.007G136200 expressed protein -
3 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
4 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
5 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
6 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
7 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
8 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
9 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
10 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
11 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.002G091600 methyltransferase, putative, expressed -
13 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
14 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
15 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
16 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
17 Sobic.004G193700 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
18 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
19 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
20 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic007G171400 Sobic007G171400 Sobic001G516901 Sobic001G516901 Sobic007G171400--Sobic001G516901 Sobic007G136200 Sobic007G136200 Sobic007G171400--Sobic007G136200 Sobic003G229300 Sobic003G229300 Sobic007G171400--Sobic003G229300 Sobic006G173600 Sobic006G173600 Sobic007G171400--Sobic006G173600 Sobic004G054400 Sobic004G054400 Sobic007G171400--Sobic004G054400 Sobic004G178100 Sobic004G178100 Sobic007G171400--Sobic004G178100 Sobic001G048100 Sobic001G048100 Sobic007G171400--Sobic001G048100 Sobic008G115900 Sobic008G115900 Sobic007G171400--Sobic008G115900 Sobic008G062400 Sobic008G062400 Sobic007G171400--Sobic008G062400 Sobic001G500600 Sobic001G500600 Sobic001G516901--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800 Sobic006G158100 Sobic006G158100 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 Sobic003G191700 Sobic003G191700 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic003G229300--Sobic001G169900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic003G110800 Sobic003G110800 Sobic006G173600--Sobic003G110800 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G173600--Sobic006G158100 Sobic006G173600--Sobic004G178100 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic001G124800 Sobic001G124800 Sobic004G054400--Sobic001G124800 Sobic001G309300 Sobic001G309300 Sobic004G054400--Sobic001G309300 Sobic003G387100 Sobic003G387100 Sobic004G054400--Sobic003G387100 Sobic001G032700 Sobic001G032700 Sobic004G054400--Sobic001G032700 Sobic008G001900 Sobic008G001900 Sobic004G054400--Sobic008G001900 Sobic004G054400--Sobic001G516901 Sobic001G512500 Sobic001G512500 Sobic004G054400--Sobic001G512500 Sobic004G336000 Sobic004G336000 Sobic004G054400--Sobic004G336000 Sobic006G010900 Sobic006G010900 Sobic004G054400--Sobic006G010900 Sobic002G000600 Sobic002G000600 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic004G178100--Sobic010G043800 Sobic004G178100--Sobic006G173600 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G178100--Sobic004G337400 Sobic004G178100--Sobic001G516901 Sobic001G080700 Sobic001G080700 Sobic001G048100--Sobic001G080700 Sobic010G184100 Sobic010G184100 Sobic001G048100--Sobic010G184100 Sobic009G165800 Sobic009G165800 Sobic001G048100--Sobic009G165800 Sobic004G121100 Sobic004G121100 Sobic001G048100--Sobic004G121100 Sobic001G048100--Sobic007G171400 Sobic010G251000 Sobic010G251000 Sobic001G048100--Sobic010G251000 Sobic004G040900 Sobic004G040900 Sobic001G048100--Sobic004G040900 Sobic003G264200 Sobic003G264200 Sobic001G048100--Sobic003G264200 Sobic004G269000 Sobic004G269000 Sobic001G048100--Sobic004G269000 Sobic008G115900--Sobic007G136200 Sobic008G115900--Sobic006G158100 Sobic006G130300 Sobic006G130300 Sobic008G115900--Sobic006G130300 Sobic006G207800 Sobic006G207800 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic008G115900--Sobic003G229300 Sobic001G491000 Sobic001G491000 Sobic008G115900--Sobic001G491000 Sobic003G141100 Sobic003G141100 Sobic008G062400--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic008G062400--Sobic003G232700 Sobic007G023200 Sobic007G023200 Sobic008G062400--Sobic007G023200 Sobic004G120100 Sobic004G120100 Sobic008G062400--Sobic004G120100 Sobic008G062400--Sobic002G000600 Sobic008G062400--Sobic003G247400 Sobic003G234900 Sobic003G234900 Sobic008G062400--Sobic003G234900 Sobic002G347600 Sobic002G347600 Sobic008G062400--Sobic002G347600 Sobic004G163800 Sobic004G163800 Sobic008G062400--Sobic004G163800
Octagon: transcription factors


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