Gene annotation
Transcriptome id Sobic.003G319800.3,Sobic.003G319800.1,Sobic.003G319800.2
Synonym Sb03g036670
Functional annotation bHelix-loop-helix transcription factor, putative, expressed
UniProt A0A1W0VZZ9 , A0A1B6Q6I9 , A0A1B6Q6J0
Pfam -
Panther DB PTHR16223 PTHR16223:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61660 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g57580.1 : bHelix-loop-helix transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a044139 , Zm00025a027256
Brachypodium PNT70971 , PNT70972 , PNT73007 , KQK05546 , KQK10102 , KQK10101
Barley HORVU3Hr1G077260.9 , HORVU3Hr1G077260.8 , HORVU3Hr1G077260.3 , HORVU3Hr1G077260.2 , HORVU3Hr1G077260.1 , HORVU3Hr1G077260.7 , HORVU3Hr1G077260.6 , HORVU3Hr1G077260.5 , HORVU3Hr1G077260.4 , HORVU3Hr1G077260.12 , HORVU3Hr1G077260.11 , HORVU3Hr1G077260.10 , HORVU3Hr1G077260.15 , HORVU3Hr1G077260.14 , HORVU3Hr1G077260.13 , HORVU3Hr1G077260.16
Wheat TraesCS3D02G317500 , TraesCS3D02G317500 , TraesCS3A02G324000 , TraesCS3A02G324000 , TraesCS3A02G324000 , TraesCS3B02G353100 , TraesCS3B02G353100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
2 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.001G292700 crcB-like protein, expressed -
4 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
5 Sobic.007G136200 expressed protein -
6 Sobic.002G172700 Galactose mutarotase-like superfamily protein(PubMedID : 26465154)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
7 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
8 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
9 Sobic.001G020100 expressed protein -
10 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
11 Sobic.001G097100 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
12 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
13 Sobic.002G091600 methyltransferase, putative, expressed -
14 Sobic.004G125700 isochorismatase family protein, putative, expressed -
15 Sobic.007G150100 HD domain containing protein, putative, expressed -
16 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
17 Sobic.004G193700 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
18 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
19 Sobic.009G084500 ethylene-responsive protein related, putative, expressed -
20 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic003G319800 Sobic003G319800 Sobic010G023700 Sobic010G023700 Sobic003G319800--Sobic010G023700 Sobic001G085600 Sobic001G085600 Sobic003G319800--Sobic001G085600 Sobic001G292700 Sobic001G292700 Sobic003G319800--Sobic001G292700 Sobic003G024300 Sobic003G024300 Sobic003G319800--Sobic003G024300 Sobic007G136200 Sobic007G136200 Sobic003G319800--Sobic007G136200 Sobic002G172700 Sobic002G172700 Sobic003G319800--Sobic002G172700 Sobic005G100600 Sobic005G100600 Sobic003G319800--Sobic005G100600 Sobic001G261545 Sobic001G261545 Sobic003G319800--Sobic001G261545 Sobic001G020100 Sobic001G020100 Sobic003G319800--Sobic001G020100 Sobic002G051100 Sobic002G051100 Sobic010G023700--Sobic002G051100 Sobic009G063100 Sobic009G063100 Sobic010G023700--Sobic009G063100 Sobic001G129000 Sobic001G129000 Sobic010G023700--Sobic001G129000 Sobic004G272100 Sobic004G272100 Sobic010G023700--Sobic004G272100 Sobic004G125700 Sobic004G125700 Sobic010G023700--Sobic004G125700 Sobic001G102800 Sobic001G102800 Sobic010G023700--Sobic001G102800 Sobic007G140800 Sobic007G140800 Sobic010G023700--Sobic007G140800 Sobic002G277100 Sobic002G277100 Sobic010G023700--Sobic002G277100 Sobic010G023700--Sobic001G020100 Sobic001G085600--Sobic005G100600 Sobic004G193700 Sobic004G193700 Sobic001G085600--Sobic004G193700 Sobic001G085600--Sobic001G261545 Sobic006G092000 Sobic006G092000 Sobic001G085600--Sobic006G092000 Sobic002G309900 Sobic002G309900 Sobic001G085600--Sobic002G309900 Sobic001G203400 Sobic001G203400 Sobic001G085600--Sobic001G203400 Sobic002G218500 Sobic002G218500 Sobic001G085600--Sobic002G218500 Sobic005G198000 Sobic005G198000 Sobic001G085600--Sobic005G198000 Sobic001G085600--Sobic003G319800 Sobic003G127800 Sobic003G127800 Sobic001G292700--Sobic003G127800 Sobic001G043000 Sobic001G043000 Sobic001G292700--Sobic001G043000 Sobic001G491000 Sobic001G491000 Sobic001G292700--Sobic001G491000 Sobic001G263100 Sobic001G263100 Sobic001G292700--Sobic001G263100 Sobic003G097600 Sobic003G097600 Sobic001G292700--Sobic003G097600 Sobic004G151800 Sobic004G151800 Sobic001G292700--Sobic004G151800 Sobic004G154200 Sobic004G154200 Sobic001G292700--Sobic004G154200 Sobic006G153400 Sobic006G153400 Sobic001G292700--Sobic006G153400 Sobic001G292700--Sobic003G319800 Sobic007G009200 Sobic007G009200 Sobic003G024300--Sobic007G009200 Sobic006G077400 Sobic006G077400 Sobic003G024300--Sobic006G077400 Sobic001G329400 Sobic001G329400 Sobic003G024300--Sobic001G329400 Sobic003G024300--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic003G024300--Sobic009G104800 Sobic003G398800 Sobic003G398800 Sobic003G024300--Sobic003G398800 Sobic003G024300--Sobic004G125700 Sobic007G161500 Sobic007G161500 Sobic003G024300--Sobic007G161500 Sobic010G201700 Sobic010G201700 Sobic003G024300--Sobic010G201700 Sobic006G158100 Sobic006G158100 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 Sobic002G172700--Sobic007G136200 Sobic010G153900 Sobic010G153900 Sobic002G172700--Sobic010G153900 Sobic002G172700--Sobic007G140800 Sobic002G172700--Sobic003G024300 Sobic008G115900 Sobic008G115900 Sobic002G172700--Sobic008G115900 Sobic002G172700--Sobic009G104800 Sobic002G172700--Sobic004G125700 Sobic001G514800 Sobic001G514800 Sobic002G172700--Sobic001G514800 Sobic001G468700 Sobic001G468700 Sobic002G172700--Sobic001G468700 Sobic005G100600--Sobic006G092000 Sobic007G136800 Sobic007G136800 Sobic005G100600--Sobic007G136800 Sobic005G100600--Sobic001G085600 Sobic003G110800 Sobic003G110800 Sobic005G100600--Sobic003G110800 Sobic001G465700 Sobic001G465700 Sobic005G100600--Sobic001G465700 Sobic006G038500 Sobic006G038500 Sobic005G100600--Sobic006G038500 Sobic006G173600 Sobic006G173600 Sobic005G100600--Sobic006G173600 Sobic005G100600--Sobic001G261545 Sobic002G091600 Sobic002G091600 Sobic005G100600--Sobic002G091600 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400 Sobic001G020100--Sobic001G491000 Sobic003G370000 Sobic003G370000 Sobic001G020100--Sobic003G370000 Sobic001G289500 Sobic001G289500 Sobic001G020100--Sobic001G289500 Sobic001G020100--Sobic007G161500 Sobic006G130300 Sobic006G130300 Sobic001G020100--Sobic006G130300 Sobic005G056400 Sobic005G056400 Sobic001G020100--Sobic005G056400 Sobic001G076900 Sobic001G076900 Sobic001G020100--Sobic001G076900 Sobic006G238200 Sobic006G238200 Sobic001G020100--Sobic006G238200 Sobic001G100000 Sobic001G100000 Sobic001G020100--Sobic001G100000
Octagon: transcription factors


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