Gene annotation
Transcriptome id Sobic.002G294500.1
Synonym Sb02g032580
Functional annotation OsRCI2-11 - Hydrophobic protein OSR8, expressed
UniProt C5X7T8
Pfam PF01679
Panther DB PTHR21659 PTHR21659:SF29
NCBI CDD KOG1773; Stress responsive protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G38905 : Low temperature and salt responsive protein family
RAP-DB (Rice) LOC_Os09g38560.1 : OsRCI2-11 - Hydrophobic protein OSR8, expressed
MaizeGDB (Corn) Zm00025a052306
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G294500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G214400 choline/ethanolamine kinase, putative, expressed K00894: ETNK, ethanolamine kinase
2 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
3 Sobic.003G341400 phox domain-containing protein, putative, expressed -
4 Sobic.003G369900 expressed protein -
5 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
6 Sobic.001G386300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G240900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
9 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
10 Sobic.004G094300 protein kinase domain containing protein, expressed K04424: ZAK, sterile alpha motif and leucine zipper containing kinase AZK
11 Sobic.007G207400 Ser/Thr protein phosphatase family protein, putative, expressed K04460: serine/threonine-protein phosphatase 5
12 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
13 Sobic.004G003401 - -
14 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
15 Sobic.007G187200 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.009G068500 expressed protein -
17 Sobic.001G484700 expressed protein K15688: E3 ubiquitin-protein ligase MUL1
18 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
19 Sobic.002G394400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta


Gene co-expression network
sample Sobic002G294500 Sobic002G294500 Sobic002G214400 Sobic002G214400 Sobic002G294500--Sobic002G214400 Sobic001G031100 Sobic001G031100 Sobic002G294500--Sobic001G031100 Sobic003G341400 Sobic003G341400 Sobic002G294500--Sobic003G341400 Sobic003G369900 Sobic003G369900 Sobic002G294500--Sobic003G369900 Sobic001G541100 Sobic001G541100 Sobic002G294500--Sobic001G541100 Sobic001G386300 Sobic001G386300 Sobic002G294500--Sobic001G386300 Sobic010G240900 Sobic010G240900 Sobic002G294500--Sobic010G240900 Sobic007G033800 Sobic007G033800 Sobic002G294500--Sobic007G033800 Sobic009G205200 Sobic009G205200 Sobic002G294500--Sobic009G205200 Sobic002G214400--Sobic002G294500 Sobic001G313500 Sobic001G313500 Sobic002G214400--Sobic001G313500 Sobic001G312500 Sobic001G312500 Sobic002G214400--Sobic001G312500 Sobic004G003401 Sobic004G003401 Sobic002G214400--Sobic004G003401 Sobic002G214400--Sobic001G541100 Sobic001G105500 Sobic001G105500 Sobic002G214400--Sobic001G105500 Sobic004G228800 Sobic004G228800 Sobic002G214400--Sobic004G228800 Sobic010G235200 Sobic010G235200 Sobic002G214400--Sobic010G235200 Sobic003G105101 Sobic003G105101 Sobic002G214400--Sobic003G105101 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic003G264200 Sobic003G264200 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic009G222500 Sobic009G222500 Sobic001G031100--Sobic009G222500 Sobic001G080700 Sobic001G080700 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G031100--Sobic010G251000 Sobic007G104800 Sobic007G104800 Sobic003G341400--Sobic007G104800 Sobic002G126500 Sobic002G126500 Sobic003G341400--Sobic002G126500 Sobic001G119300 Sobic001G119300 Sobic003G341400--Sobic001G119300 Sobic010G101800 Sobic010G101800 Sobic003G341400--Sobic010G101800 Sobic003G341400--Sobic009G205200 Sobic003G341400--Sobic001G007000 Sobic002G297200 Sobic002G297200 Sobic003G341400--Sobic002G297200 Sobic009G249500 Sobic009G249500 Sobic003G341400--Sobic009G249500 Sobic007G009400 Sobic007G009400 Sobic003G341400--Sobic007G009400 Sobic008G046500 Sobic008G046500 Sobic003G369900--Sobic008G046500 Sobic003G369900--Sobic001G031100 Sobic007G187200 Sobic007G187200 Sobic003G369900--Sobic007G187200 Sobic003G369900--Sobic009G068500 Sobic005G160400 Sobic005G160400 Sobic003G369900--Sobic005G160400 Sobic003G369900--Sobic002G294500 Sobic010G068700 Sobic010G068700 Sobic003G369900--Sobic010G068700 Sobic003G369900--Sobic009G205200 Sobic003G369900--Sobic010G240900 Sobic009G219000 Sobic009G219000 Sobic001G541100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic001G541100--Sobic001G323000 Sobic009G219900 Sobic009G219900 Sobic001G541100--Sobic009G219900 Sobic009G138100 Sobic009G138100 Sobic001G541100--Sobic009G138100 Sobic006G209400 Sobic006G209400 Sobic001G541100--Sobic006G209400 Sobic001G395400 Sobic001G395400 Sobic001G541100--Sobic001G395400 Sobic010G130000 Sobic010G130000 Sobic001G541100--Sobic010G130000 Sobic001G541100--Sobic001G105500 Sobic002G134600 Sobic002G134600 Sobic001G541100--Sobic002G134600 Sobic002G054300 Sobic002G054300 Sobic001G386300--Sobic002G054300 Sobic003G121300 Sobic003G121300 Sobic001G386300--Sobic003G121300 Sobic004G210800 Sobic004G210800 Sobic001G386300--Sobic004G210800 Sobic001G386300--Sobic001G080700 Sobic001G386300--Sobic001G031100 Sobic001G332500 Sobic001G332500 Sobic001G386300--Sobic001G332500 Sobic003G316700 Sobic003G316700 Sobic001G386300--Sobic003G316700 Sobic010G029900 Sobic010G029900 Sobic001G386300--Sobic010G029900 Sobic001G386300--Sobic002G126500 Sobic007G207400 Sobic007G207400 Sobic010G240900--Sobic007G207400 Sobic004G041500 Sobic004G041500 Sobic010G240900--Sobic004G041500 Sobic004G117900 Sobic004G117900 Sobic010G240900--Sobic004G117900 Sobic001G297500 Sobic001G297500 Sobic010G240900--Sobic001G297500 Sobic010G240900--Sobic003G341400 Sobic001G046200 Sobic001G046200 Sobic010G240900--Sobic001G046200 Sobic003G131400 Sobic003G131400 Sobic010G240900--Sobic003G131400 Sobic001G492300 Sobic001G492300 Sobic010G240900--Sobic001G492300 Sobic010G240900--Sobic009G205200 Sobic005G033200 Sobic005G033200 Sobic007G033800--Sobic005G033200 Sobic001G339500 Sobic001G339500 Sobic007G033800--Sobic001G339500 Sobic010G023700 Sobic010G023700 Sobic007G033800--Sobic010G023700 Sobic007G033800--Sobic001G031100 Sobic006G173600 Sobic006G173600 Sobic007G033800--Sobic006G173600 Sobic002G339600 Sobic002G339600 Sobic007G033800--Sobic002G339600 Sobic001G071800 Sobic001G071800 Sobic007G033800--Sobic001G071800 Sobic002G111200 Sobic002G111200 Sobic007G033800--Sobic002G111200 Sobic002G421900 Sobic002G421900 Sobic007G033800--Sobic002G421900 Sobic004G121100 Sobic004G121100 Sobic009G205200--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic009G205200--Sobic001G107500 Sobic002G350300 Sobic002G350300 Sobic009G205200--Sobic002G350300 Sobic009G205200--Sobic007G104800 Sobic006G200600 Sobic006G200600 Sobic009G205200--Sobic006G200600 Sobic003G345400 Sobic003G345400 Sobic009G205200--Sobic003G345400 Sobic009G205200--Sobic001G119300 Sobic003G248200 Sobic003G248200 Sobic009G205200--Sobic003G248200 Sobic008G179700 Sobic008G179700 Sobic009G205200--Sobic008G179700
Octagon: transcription factors


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