Gene annotation
Transcriptome id Sobic.003G369900.1
Synonym Sb03g041090
Functional annotation expressed protein
UniProt C5XR86
Pfam PF03798
Panther DB PTHR13439 PTHR13439:SF4
NCBI CDD KOG4474; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G21790 : TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
RAP-DB (Rice) LOC_Os01g64930.1 : expressed protein
MaizeGDB (Corn) Zm00025a026670 , Zm00025a039556
Brachypodium PNT73268 , KQK10795 , KQK10796 , KQK10797
Barley HORVU3Hr1G082980.2 , HORVU3Hr1G083020.8 , HORVU3Hr1G083020.11 , HORVU3Hr1G083020.12 , HORVU3Hr1G083020.13 , HORVU3Hr1G082750.1 , HORVU3Hr1G083020.2
Wheat TraesCS3D02G374100 , TraesCS3B02G413600 , TraesCS3A02G380900
Populus -


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cDNA sequences
Sobic.003G369900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
2 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
3 Sobic.007G187200 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.009G068500 expressed protein -
5 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
6 Sobic.002G294500 OsRCI2-11 - Hydrophobic protein OSR8, expressed -
7 Sobic.010G068700 transporter family protein, putative, expressed K15281: solute carrier family 35
8 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
9 Sobic.010G240900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
11 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
12 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor
14 Sobic.003G102400 expressed protein -
15 Sobic.002G170200 zinc finger family protein, putative, expressed -
16 Sobic.004G003401 - -
17 Sobic.006G200600 expressed protein -
18 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
19 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
20 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -


Gene co-expression network
sample Sobic003G369900 Sobic003G369900 Sobic008G046500 Sobic008G046500 Sobic003G369900--Sobic008G046500 Sobic001G031100 Sobic001G031100 Sobic003G369900--Sobic001G031100 Sobic007G187200 Sobic007G187200 Sobic003G369900--Sobic007G187200 Sobic009G068500 Sobic009G068500 Sobic003G369900--Sobic009G068500 Sobic005G160400 Sobic005G160400 Sobic003G369900--Sobic005G160400 Sobic002G294500 Sobic002G294500 Sobic003G369900--Sobic002G294500 Sobic010G068700 Sobic010G068700 Sobic003G369900--Sobic010G068700 Sobic009G205200 Sobic009G205200 Sobic003G369900--Sobic009G205200 Sobic010G240900 Sobic010G240900 Sobic003G369900--Sobic010G240900 Sobic001G007000 Sobic001G007000 Sobic008G046500--Sobic001G007000 Sobic006G200600 Sobic006G200600 Sobic008G046500--Sobic006G200600 Sobic001G389100 Sobic001G389100 Sobic008G046500--Sobic001G389100 Sobic007G093800 Sobic007G093800 Sobic008G046500--Sobic007G093800 Sobic010G251000 Sobic010G251000 Sobic008G046500--Sobic010G251000 Sobic004G092500 Sobic004G092500 Sobic008G046500--Sobic004G092500 Sobic004G286500 Sobic004G286500 Sobic008G046500--Sobic004G286500 Sobic008G046500--Sobic009G068500 Sobic003G102400 Sobic003G102400 Sobic008G046500--Sobic003G102400 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic003G264200 Sobic003G264200 Sobic001G031100--Sobic003G264200 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic009G222500 Sobic009G222500 Sobic001G031100--Sobic009G222500 Sobic001G080700 Sobic001G080700 Sobic001G031100--Sobic001G080700 Sobic001G031100--Sobic009G068500 Sobic001G031100--Sobic010G251000 Sobic004G356900 Sobic004G356900 Sobic007G187200--Sobic004G356900 Sobic007G187200--Sobic006G200600 Sobic007G187200--Sobic008G046500 Sobic001G143500 Sobic001G143500 Sobic007G187200--Sobic001G143500 Sobic004G066200 Sobic004G066200 Sobic007G187200--Sobic004G066200 Sobic009G198100 Sobic009G198100 Sobic007G187200--Sobic009G198100 Sobic007G203200 Sobic007G203200 Sobic007G187200--Sobic007G203200 Sobic004G104900 Sobic004G104900 Sobic007G187200--Sobic004G104900 Sobic007G118200 Sobic007G118200 Sobic007G187200--Sobic007G118200 Sobic009G068500--Sobic001G007000 Sobic001G193300 Sobic001G193300 Sobic009G068500--Sobic001G193300 Sobic003G264100 Sobic003G264100 Sobic009G068500--Sobic003G264100 Sobic009G068500--Sobic007G093800 Sobic003G006300 Sobic003G006300 Sobic009G068500--Sobic003G006300 Sobic003G365300 Sobic003G365300 Sobic009G068500--Sobic003G365300 Sobic002G359400 Sobic002G359400 Sobic009G068500--Sobic002G359400 Sobic010G020400 Sobic010G020400 Sobic009G068500--Sobic010G020400 Sobic009G068500--Sobic010G251000 Sobic009G092400 Sobic009G092400 Sobic005G160400--Sobic009G092400 Sobic007G084100 Sobic007G084100 Sobic005G160400--Sobic007G084100 Sobic010G237900 Sobic010G237900 Sobic005G160400--Sobic010G237900 Sobic010G092300 Sobic010G092300 Sobic005G160400--Sobic010G092300 Sobic002G347000 Sobic002G347000 Sobic005G160400--Sobic002G347000 Sobic001G473600 Sobic001G473600 Sobic005G160400--Sobic001G473600 Sobic010G265300 Sobic010G265300 Sobic005G160400--Sobic010G265300 Sobic006G121300 Sobic006G121300 Sobic005G160400--Sobic006G121300 Sobic001G114500 Sobic001G114500 Sobic005G160400--Sobic001G114500 Sobic002G214400 Sobic002G214400 Sobic002G294500--Sobic002G214400 Sobic002G294500--Sobic001G031100 Sobic003G341400 Sobic003G341400 Sobic002G294500--Sobic003G341400 Sobic002G294500--Sobic003G369900 Sobic001G541100 Sobic001G541100 Sobic002G294500--Sobic001G541100 Sobic001G386300 Sobic001G386300 Sobic002G294500--Sobic001G386300 Sobic002G294500--Sobic010G240900 Sobic007G033800 Sobic007G033800 Sobic002G294500--Sobic007G033800 Sobic002G294500--Sobic009G205200 Sobic004G198600 Sobic004G198600 Sobic010G068700--Sobic004G198600 Sobic002G355800 Sobic002G355800 Sobic010G068700--Sobic002G355800 Sobic009G228000 Sobic009G228000 Sobic010G068700--Sobic009G228000 Sobic007G162100 Sobic007G162100 Sobic010G068700--Sobic007G162100 Sobic003G182300 Sobic003G182300 Sobic010G068700--Sobic003G182300 Sobic001G049400 Sobic001G049400 Sobic010G068700--Sobic001G049400 Sobic006G039400 Sobic006G039400 Sobic010G068700--Sobic006G039400 Sobic001G014200 Sobic001G014200 Sobic010G068700--Sobic001G014200 Sobic006G174850 Sobic006G174850 Sobic010G068700--Sobic006G174850 Sobic004G121100 Sobic004G121100 Sobic009G205200--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic009G205200--Sobic001G107500 Sobic002G350300 Sobic002G350300 Sobic009G205200--Sobic002G350300 Sobic007G104800 Sobic007G104800 Sobic009G205200--Sobic007G104800 Sobic009G205200--Sobic006G200600 Sobic003G345400 Sobic003G345400 Sobic009G205200--Sobic003G345400 Sobic001G119300 Sobic001G119300 Sobic009G205200--Sobic001G119300 Sobic003G248200 Sobic003G248200 Sobic009G205200--Sobic003G248200 Sobic008G179700 Sobic008G179700 Sobic009G205200--Sobic008G179700 Sobic007G207400 Sobic007G207400 Sobic010G240900--Sobic007G207400 Sobic004G041500 Sobic004G041500 Sobic010G240900--Sobic004G041500 Sobic004G117900 Sobic004G117900 Sobic010G240900--Sobic004G117900 Sobic001G297500 Sobic001G297500 Sobic010G240900--Sobic001G297500 Sobic010G240900--Sobic003G341400 Sobic001G046200 Sobic001G046200 Sobic010G240900--Sobic001G046200 Sobic003G131400 Sobic003G131400 Sobic010G240900--Sobic003G131400 Sobic001G492300 Sobic001G492300 Sobic010G240900--Sobic001G492300 Sobic010G240900--Sobic009G205200
Octagon: transcription factors


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