Gene annotation
Transcriptome id Sobic.001G484700.1
Synonym Sb01g045370
Functional annotation expressed protein
UniProt C5WVU4
Pfam PF13920 PF12483
Panther DB PTHR12183
NCBI CDD KOG4172; Predicted E3 ubiquitin ligase
KEGG Orthology K15688; E3 ubiquitin-protein ligase MUL1
Gene Ontology GO:0007005; mitochondrion organization GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G54150 : E3 Ubiquitin ligase family protein
RAP-DB (Rice) LOC_Os03g08000.1 : expressed protein
MaizeGDB (Corn) Zm00025a053303
Brachypodium KQK23344
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase
2 Sobic.006G219000 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed -
3 Sobic.010G068700 transporter family protein, putative, expressed K15281: solute carrier family 35
4 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
5 Sobic.001G480100 - -
6 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
7 Sobic.001G216100 expressed protein -
8 Sobic.001G294300 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
9 Sobic.009G139300 expressed protein -
10 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
11 Sobic.010G028300 bromodomain domain containing protein, expressed -
12 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
13 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
14 Sobic.002G268400 expressed protein -
15 Sobic.001G537800 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
16 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
17 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
18 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
19 Sobic.002G294500 OsRCI2-11 - Hydrophobic protein OSR8, expressed -
20 Sobic.004G198600 cyclin G-associated kinase, putative, expressed K08853: AP2-associated kinase


Gene co-expression network
sample Sobic001G484700 Sobic001G484700 Sobic001G014200 Sobic001G014200 Sobic001G484700--Sobic001G014200 Sobic006G219000 Sobic006G219000 Sobic001G484700--Sobic006G219000 Sobic010G068700 Sobic010G068700 Sobic001G484700--Sobic010G068700 Sobic001G031100 Sobic001G031100 Sobic001G484700--Sobic001G031100 Sobic001G480100 Sobic001G480100 Sobic001G484700--Sobic001G480100 Sobic007G105900 Sobic007G105900 Sobic001G484700--Sobic007G105900 Sobic001G216100 Sobic001G216100 Sobic001G484700--Sobic001G216100 Sobic001G294300 Sobic001G294300 Sobic001G484700--Sobic001G294300 Sobic009G139300 Sobic009G139300 Sobic001G484700--Sobic009G139300 Sobic007G087000 Sobic007G087000 Sobic001G014200--Sobic007G087000 Sobic007G125000 Sobic007G125000 Sobic001G014200--Sobic007G125000 Sobic002G079000 Sobic002G079000 Sobic001G014200--Sobic002G079000 Sobic004G198600 Sobic004G198600 Sobic001G014200--Sobic004G198600 Sobic002G355800 Sobic002G355800 Sobic001G014200--Sobic002G355800 Sobic007G017800 Sobic007G017800 Sobic001G014200--Sobic007G017800 Sobic001G014200--Sobic001G484700 Sobic001G405600 Sobic001G405600 Sobic001G014200--Sobic001G405600 Sobic001G014200--Sobic010G068700 Sobic003G121300 Sobic003G121300 Sobic006G219000--Sobic003G121300 Sobic009G207200 Sobic009G207200 Sobic006G219000--Sobic009G207200 Sobic007G189000 Sobic007G189000 Sobic006G219000--Sobic007G189000 Sobic006G219000--Sobic001G484700 Sobic001G507400 Sobic001G507400 Sobic006G219000--Sobic001G507400 Sobic006G219000--Sobic001G294300 Sobic006G219000--Sobic001G216100 Sobic006G219000--Sobic010G068700 Sobic006G121300 Sobic006G121300 Sobic006G219000--Sobic006G121300 Sobic010G068700--Sobic004G198600 Sobic010G068700--Sobic002G355800 Sobic009G228000 Sobic009G228000 Sobic010G068700--Sobic009G228000 Sobic007G162100 Sobic007G162100 Sobic010G068700--Sobic007G162100 Sobic003G182300 Sobic003G182300 Sobic010G068700--Sobic003G182300 Sobic001G049400 Sobic001G049400 Sobic010G068700--Sobic001G049400 Sobic006G039400 Sobic006G039400 Sobic010G068700--Sobic006G039400 Sobic010G068700--Sobic001G014200 Sobic006G174850 Sobic006G174850 Sobic010G068700--Sobic006G174850 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic003G264200 Sobic003G264200 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic009G222500 Sobic009G222500 Sobic001G031100--Sobic009G222500 Sobic001G080700 Sobic001G080700 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G031100--Sobic010G251000 Sobic004G209700 Sobic004G209700 Sobic001G480100--Sobic004G209700 Sobic001G480100--Sobic007G125000 Sobic009G092400 Sobic009G092400 Sobic001G480100--Sobic009G092400 Sobic001G384300 Sobic001G384300 Sobic001G480100--Sobic001G384300 Sobic001G480100--Sobic009G228000 Sobic007G008900 Sobic007G008900 Sobic001G480100--Sobic007G008900 Sobic002G112700 Sobic002G112700 Sobic001G480100--Sobic002G112700 Sobic007G218000 Sobic007G218000 Sobic001G480100--Sobic007G218000 Sobic010G226000 Sobic010G226000 Sobic001G480100--Sobic010G226000 Sobic007G105900--Sobic001G405600 Sobic001G035200 Sobic001G035200 Sobic007G105900--Sobic001G035200 Sobic007G105900--Sobic007G017800 Sobic002G136400 Sobic002G136400 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic010G059500 Sobic010G059500 Sobic007G105900--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G105900--Sobic007G189000 Sobic001G216100--Sobic006G121300 Sobic010G028300 Sobic010G028300 Sobic001G216100--Sobic010G028300 Sobic002G383300 Sobic002G383300 Sobic001G216100--Sobic002G383300 Sobic001G395100 Sobic001G395100 Sobic001G216100--Sobic001G395100 Sobic003G439800 Sobic003G439800 Sobic001G216100--Sobic003G439800 Sobic007G075900 Sobic007G075900 Sobic001G216100--Sobic007G075900 Sobic007G056500 Sobic007G056500 Sobic001G216100--Sobic007G056500 Sobic004G266900 Sobic004G266900 Sobic001G216100--Sobic004G266900 Sobic009G036200 Sobic009G036200 Sobic001G216100--Sobic009G036200 Sobic003G119700 Sobic003G119700 Sobic001G294300--Sobic003G119700 Sobic010G235200 Sobic010G235200 Sobic001G294300--Sobic010G235200 Sobic002G056701 Sobic002G056701 Sobic001G294300--Sobic002G056701 Sobic004G316700 Sobic004G316700 Sobic001G294300--Sobic004G316700 Sobic001G294300--Sobic006G219000 Sobic008G124900 Sobic008G124900 Sobic001G294300--Sobic008G124900 Sobic001G441400 Sobic001G441400 Sobic001G294300--Sobic001G441400 Sobic010G275400 Sobic010G275400 Sobic001G294300--Sobic010G275400 Sobic006G281700 Sobic006G281700 Sobic001G294300--Sobic006G281700 Sobic001G428800 Sobic001G428800 Sobic009G139300--Sobic001G428800 Sobic002G256200 Sobic002G256200 Sobic009G139300--Sobic002G256200 Sobic003G422900 Sobic003G422900 Sobic009G139300--Sobic003G422900 Sobic002G268400 Sobic002G268400 Sobic009G139300--Sobic002G268400 Sobic009G139300--Sobic001G014200 Sobic004G345400 Sobic004G345400 Sobic009G139300--Sobic004G345400 Sobic001G358500 Sobic001G358500 Sobic009G139300--Sobic001G358500 Sobic009G214900 Sobic009G214900 Sobic009G139300--Sobic009G214900 Sobic002G117400 Sobic002G117400 Sobic009G139300--Sobic002G117400
Octagon: transcription factors


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