Gene annotation
Transcriptome id Sobic.009G139300.1,Sobic.009G139300.2
Synonym Sb09g020490
Functional annotation expressed protein
UniProt C5YXW3 , A0A1Z5R2M9
Pfam PF14766 PF14767 PF14768
Panther DB PTHR31742 PTHR31742:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12760 : -
RAP-DB (Rice) LOC_Os05g34480.1 : expressed protein
MaizeGDB (Corn) Zm00025a043720
Brachypodium PNT71246 , KQK06226 , KQK06225 , KQK06224 , KQK06230 , KQK06231 , KQK06232 , KQK06233 , KQK06234 , PNT71248 , PNT71249 , KQK06229 , KQK06228 , PNT71247 , KQK06223 , KQK06227
Barley HORVU1Hr1G064560.9 , HORVU1Hr1G064560.4 , HORVU1Hr1G064560.8 , HORVU1Hr1G064560.6 , HORVU1Hr1G064560.2 , HORVU1Hr1G064560.3 , HORVU1Hr1G064560.14 , HORVU1Hr1G064560.15 , HORVU1Hr1G064560.10 , HORVU1Hr1G064560.11 , HORVU1Hr1G064560.12 , HORVU1Hr1G064560.13
Wheat TraesCS1B02G270900 , TraesCS1B02G270900 , TraesCS1D02G260300 , TraesCS1D02G260300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
2 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
3 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
4 Sobic.002G268400 expressed protein -
5 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase
6 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
7 Sobic.001G358500 GA20734-PA, putative, expressed -
8 Sobic.009G214900 expressed protein -
9 Sobic.002G117400 expressed protein -
10 Sobic.009G164000 tentative name(PubMedID : 31536532)@cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
11 Sobic.008G018500 expressed protein -
12 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
13 Sobic.004G059400 TATA-binding protein-associated factor TAFII55 family protein, putative, expressed K03132: transcription initiation factor TFIID subunit 7
14 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
15 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
16 Sobic.001G484700 expressed protein K15688: E3 ubiquitin-protein ligase MUL1
17 Sobic.003G220700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
19 Sobic.003G121300 expressed protein K15170: mediator of RNA polymerase II transcription subunit 27
20 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic009G139300 Sobic009G139300 Sobic001G428800 Sobic001G428800 Sobic009G139300--Sobic001G428800 Sobic002G256200 Sobic002G256200 Sobic009G139300--Sobic002G256200 Sobic003G422900 Sobic003G422900 Sobic009G139300--Sobic003G422900 Sobic002G268400 Sobic002G268400 Sobic009G139300--Sobic002G268400 Sobic001G014200 Sobic001G014200 Sobic009G139300--Sobic001G014200 Sobic004G345400 Sobic004G345400 Sobic009G139300--Sobic004G345400 Sobic001G358500 Sobic001G358500 Sobic009G139300--Sobic001G358500 Sobic009G214900 Sobic009G214900 Sobic009G139300--Sobic009G214900 Sobic002G117400 Sobic002G117400 Sobic009G139300--Sobic002G117400 Sobic001G428800--Sobic001G358500 Sobic001G449900 Sobic001G449900 Sobic001G428800--Sobic001G449900 Sobic010G230600 Sobic010G230600 Sobic001G428800--Sobic010G230600 Sobic004G092500 Sobic004G092500 Sobic001G428800--Sobic004G092500 Sobic010G223300 Sobic010G223300 Sobic001G428800--Sobic010G223300 Sobic001G211900 Sobic001G211900 Sobic001G428800--Sobic001G211900 Sobic001G099900 Sobic001G099900 Sobic001G428800--Sobic001G099900 Sobic010G020400 Sobic010G020400 Sobic001G428800--Sobic010G020400 Sobic001G428800--Sobic009G139300 Sobic010G269100 Sobic010G269100 Sobic002G256200--Sobic010G269100 Sobic003G099300 Sobic003G099300 Sobic002G256200--Sobic003G099300 Sobic002G256200--Sobic003G422900 Sobic001G085100 Sobic001G085100 Sobic002G256200--Sobic001G085100 Sobic009G117500 Sobic009G117500 Sobic002G256200--Sobic009G117500 Sobic002G256200--Sobic002G268400 Sobic002G256200--Sobic001G428800 Sobic006G203100 Sobic006G203100 Sobic002G256200--Sobic006G203100 Sobic006G056200 Sobic006G056200 Sobic002G256200--Sobic006G056200 Sobic003G422900--Sobic010G020400 Sobic003G155900 Sobic003G155900 Sobic003G422900--Sobic003G155900 Sobic002G303600 Sobic002G303600 Sobic003G422900--Sobic002G303600 Sobic009G164000 Sobic009G164000 Sobic003G422900--Sobic009G164000 Sobic009G044800 Sobic009G044800 Sobic003G422900--Sobic009G044800 Sobic001G392300 Sobic001G392300 Sobic003G422900--Sobic001G392300 Sobic004G257100 Sobic004G257100 Sobic003G422900--Sobic004G257100 Sobic003G422900--Sobic002G256200 Sobic008G082500 Sobic008G082500 Sobic003G422900--Sobic008G082500 Sobic010G057900 Sobic010G057900 Sobic002G268400--Sobic010G057900 Sobic001G152000 Sobic001G152000 Sobic002G268400--Sobic001G152000 Sobic004G074300 Sobic004G074300 Sobic002G268400--Sobic004G074300 Sobic006G252100 Sobic006G252100 Sobic002G268400--Sobic006G252100 Sobic009G033900 Sobic009G033900 Sobic002G268400--Sobic009G033900 Sobic006G270900 Sobic006G270900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic004G356900 Sobic004G356900 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800 Sobic007G087000 Sobic007G087000 Sobic001G014200--Sobic007G087000 Sobic007G125000 Sobic007G125000 Sobic001G014200--Sobic007G125000 Sobic002G079000 Sobic002G079000 Sobic001G014200--Sobic002G079000 Sobic004G198600 Sobic004G198600 Sobic001G014200--Sobic004G198600 Sobic002G355800 Sobic002G355800 Sobic001G014200--Sobic002G355800 Sobic007G017800 Sobic007G017800 Sobic001G014200--Sobic007G017800 Sobic001G484700 Sobic001G484700 Sobic001G014200--Sobic001G484700 Sobic001G405600 Sobic001G405600 Sobic001G014200--Sobic001G405600 Sobic010G068700 Sobic010G068700 Sobic001G014200--Sobic010G068700 Sobic001G042200 Sobic001G042200 Sobic004G345400--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic004G345400--Sobic010G077500 Sobic009G249700 Sobic009G249700 Sobic004G345400--Sobic009G249700 Sobic007G042900 Sobic007G042900 Sobic004G345400--Sobic007G042900 Sobic004G180900 Sobic004G180900 Sobic004G345400--Sobic004G180900 Sobic006G186400 Sobic006G186400 Sobic004G345400--Sobic006G186400 Sobic004G084500 Sobic004G084500 Sobic004G345400--Sobic004G084500 Sobic007G056500 Sobic007G056500 Sobic004G345400--Sobic007G056500 Sobic003G394200 Sobic003G394200 Sobic004G345400--Sobic003G394200 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G358500--Sobic001G211900 Sobic006G202200 Sobic006G202200 Sobic009G214900--Sobic006G202200 Sobic009G049400 Sobic009G049400 Sobic009G214900--Sobic009G049400 Sobic009G229600 Sobic009G229600 Sobic009G214900--Sobic009G229600 Sobic003G187200 Sobic003G187200 Sobic009G214900--Sobic003G187200 Sobic009G214900--Sobic007G125000 Sobic006G163800 Sobic006G163800 Sobic009G214900--Sobic006G163800 Sobic009G126600 Sobic009G126600 Sobic009G214900--Sobic009G126600 Sobic010G185400 Sobic010G185400 Sobic009G214900--Sobic010G185400 Sobic009G170400 Sobic009G170400 Sobic009G214900--Sobic009G170400 Sobic004G323700 Sobic004G323700 Sobic002G117400--Sobic004G323700 Sobic007G093800 Sobic007G093800 Sobic002G117400--Sobic007G093800 Sobic007G167900 Sobic007G167900 Sobic002G117400--Sobic007G167900 Sobic002G117400--Sobic010G020400 Sobic002G117400--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic002G117400--Sobic002G008800 Sobic008G083200 Sobic008G083200 Sobic002G117400--Sobic008G083200 Sobic010G020300 Sobic010G020300 Sobic002G117400--Sobic010G020300 Sobic009G192000 Sobic009G192000 Sobic002G117400--Sobic009G192000
Octagon: transcription factors


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