Gene annotation
Transcriptome id Sobic.009G214900.1
Synonym Sb09g027040
Functional annotation expressed protein
UniProt C5YUV5
Pfam PF07797
Panther DB PTHR33130 PTHR33130:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55340 : Protein of unknown function (DUF1639)
RAP-DB (Rice) LOC_Os05g46395.1 : expressed protein
MaizeGDB (Corn) Zm00025a044412 , Zm00025a036465
Brachypodium PNT70794 , KQK05126
Barley HORVU1Hr1G079410.3
Wheat TraesCS1D02G368300 , TraesCS1B02G380500
Populus -


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cDNA sequences
Sobic.009G214900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
2 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
3 Sobic.009G229600 tRNA-binding arm, putative, expressed -
4 Sobic.003G187200 phox domain-containing protein, putative, expressed -
5 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -
6 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
7 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
8 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
9 Sobic.009G170400 ribonuclease P family protein("PubMedID : 26759170,PubMedID : 24597475")@ribonuclease P family protein, putative, expressed K03538: POP4, ribonuclease P protein subunit POP4
10 Sobic.003G400100 leaf senescence related protein, putative, expressed -
11 Sobic.002G164300 ZOS9-03 - C2H2 zinc finger protein, expressed -
12 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
13 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
14 Sobic.003G398400 expressed protein -
15 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
16 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
17 Sobic.002G264600 GRAM domain containing protein, expressed -
18 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein
19 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
20 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2


Gene co-expression network
sample Sobic009G214900 Sobic009G214900 Sobic006G202200 Sobic006G202200 Sobic009G214900--Sobic006G202200 Sobic009G049400 Sobic009G049400 Sobic009G214900--Sobic009G049400 Sobic009G229600 Sobic009G229600 Sobic009G214900--Sobic009G229600 Sobic003G187200 Sobic003G187200 Sobic009G214900--Sobic003G187200 Sobic007G125000 Sobic007G125000 Sobic009G214900--Sobic007G125000 Sobic006G163800 Sobic006G163800 Sobic009G214900--Sobic006G163800 Sobic009G126600 Sobic009G126600 Sobic009G214900--Sobic009G126600 Sobic010G185400 Sobic010G185400 Sobic009G214900--Sobic010G185400 Sobic009G170400 Sobic009G170400 Sobic009G214900--Sobic009G170400 Sobic003G008500 Sobic003G008500 Sobic006G202200--Sobic003G008500 Sobic004G345700 Sobic004G345700 Sobic006G202200--Sobic004G345700 Sobic006G082900 Sobic006G082900 Sobic006G202200--Sobic006G082900 Sobic006G202200--Sobic009G229600 Sobic001G518400 Sobic001G518400 Sobic006G202200--Sobic001G518400 Sobic006G202200--Sobic009G126600 Sobic003G401000 Sobic003G401000 Sobic006G202200--Sobic003G401000 Sobic006G202200--Sobic009G214900 Sobic008G149800 Sobic008G149800 Sobic006G202200--Sobic008G149800 Sobic001G369000 Sobic001G369000 Sobic009G049400--Sobic001G369000 Sobic009G049400--Sobic009G229600 Sobic001G426600 Sobic001G426600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic001G335900 Sobic001G335900 Sobic009G049400--Sobic001G335900 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic004G039600 Sobic004G039600 Sobic009G049400--Sobic004G039600 Sobic003G240700 Sobic003G240700 Sobic009G049400--Sobic003G240700 Sobic009G229600--Sobic009G049400 Sobic009G229600--Sobic001G369000 Sobic009G229600--Sobic001G335900 Sobic003G427600 Sobic003G427600 Sobic009G229600--Sobic003G427600 Sobic003G270600 Sobic003G270600 Sobic009G229600--Sobic003G270600 Sobic009G229600--Sobic006G202200 Sobic009G229600--Sobic001G518400 Sobic009G229600--Sobic004G039600 Sobic007G120500 Sobic007G120500 Sobic009G229600--Sobic007G120500 Sobic010G204400 Sobic010G204400 Sobic003G187200--Sobic010G204400 Sobic003G187200--Sobic004G345700 Sobic003G187200--Sobic004G039600 Sobic007G132100 Sobic007G132100 Sobic003G187200--Sobic007G132100 Sobic006G195700 Sobic006G195700 Sobic003G187200--Sobic006G195700 Sobic003G187200--Sobic006G163800 Sobic002G378200 Sobic002G378200 Sobic003G187200--Sobic002G378200 Sobic003G187500 Sobic003G187500 Sobic003G187200--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G187200--Sobic010G053800 Sobic007G218000 Sobic007G218000 Sobic007G125000--Sobic007G218000 Sobic002G112700 Sobic002G112700 Sobic007G125000--Sobic002G112700 Sobic009G092400 Sobic009G092400 Sobic007G125000--Sobic009G092400 Sobic007G125000--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G125000--Sobic009G192300 Sobic002G164300 Sobic002G164300 Sobic007G125000--Sobic002G164300 Sobic007G008900 Sobic007G008900 Sobic007G125000--Sobic007G008900 Sobic007G125000--Sobic009G126600 Sobic004G072100 Sobic004G072100 Sobic007G125000--Sobic004G072100 Sobic006G163800--Sobic010G204400 Sobic006G163800--Sobic001G369000 Sobic006G131000 Sobic006G131000 Sobic006G163800--Sobic006G131000 Sobic006G163800--Sobic010G053800 Sobic006G163800--Sobic007G218000 Sobic010G275500 Sobic010G275500 Sobic006G163800--Sobic010G275500 Sobic006G012500 Sobic006G012500 Sobic006G163800--Sobic006G012500 Sobic006G163800--Sobic004G039600 Sobic004G146500 Sobic004G146500 Sobic006G163800--Sobic004G146500 Sobic001G222500 Sobic001G222500 Sobic009G126600--Sobic001G222500 Sobic009G126600--Sobic010G185400 Sobic006G165000 Sobic006G165000 Sobic009G126600--Sobic006G165000 Sobic001G155000 Sobic001G155000 Sobic009G126600--Sobic001G155000 Sobic002G357700 Sobic002G357700 Sobic009G126600--Sobic002G357700 Sobic001G407200 Sobic001G407200 Sobic009G126600--Sobic001G407200 Sobic009G126600--Sobic008G149800 Sobic003G241200 Sobic003G241200 Sobic009G126600--Sobic003G241200 Sobic005G013200 Sobic005G013200 Sobic009G126600--Sobic005G013200 Sobic010G185400--Sobic003G189600 Sobic006G077200 Sobic006G077200 Sobic010G185400--Sobic006G077200 Sobic009G084900 Sobic009G084900 Sobic010G185400--Sobic009G084900 Sobic008G082500 Sobic008G082500 Sobic010G185400--Sobic008G082500 Sobic001G035200 Sobic001G035200 Sobic010G185400--Sobic001G035200 Sobic010G185400--Sobic009G126600 Sobic007G042400 Sobic007G042400 Sobic010G185400--Sobic007G042400 Sobic003G416700 Sobic003G416700 Sobic010G185400--Sobic003G416700 Sobic010G185400--Sobic004G072100 Sobic009G170400--Sobic001G155000 Sobic009G170400--Sobic003G401000 Sobic003G187400 Sobic003G187400 Sobic009G170400--Sobic003G187400 Sobic001G251700 Sobic001G251700 Sobic009G170400--Sobic001G251700 Sobic006G028200 Sobic006G028200 Sobic009G170400--Sobic006G028200 Sobic003G200200 Sobic003G200200 Sobic009G170400--Sobic003G200200 Sobic001G201400 Sobic001G201400 Sobic009G170400--Sobic001G201400 Sobic002G006300 Sobic002G006300 Sobic009G170400--Sobic002G006300 Sobic008G047800 Sobic008G047800 Sobic009G170400--Sobic008G047800
Octagon: transcription factors


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