Gene annotation
Transcriptome id Sobic.008G018500.2,Sobic.008G018500.1
Synonym Sb08g001600
Functional annotation expressed protein
UniProt C5YQP1 , A0A1Z5R4D0
Pfam -
Panther DB PTHR15157 PTHR15157:SF14
NCBI CDD KOG2896; UV radiation resistance associated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32760 : -
RAP-DB (Rice) LOC_Os06g50110.1 : expressed protein
MaizeGDB (Corn) Zm00025a053722
Brachypodium KQJ92454
Barley HORVU0Hr1G010750.3 , HORVU0Hr1G010750.2 , HORVU0Hr1G010750.4
Wheat TraesCS5A02G141000
Populus -


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cDNA sequences
Sobic.008G018500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G358500 GA20734-PA, putative, expressed -
2 Sobic.002G428100 tim44-like domain containing protein, expressed K17804: mitochondrial import inner membrane translocase subunit TIM44
3 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
4 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
5 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
6 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
7 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
8 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
9 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
10 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
11 Sobic.003G113300 expressed protein -
12 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
13 Sobic.009G122500 expressed protein -
14 Sobic.002G136400 expressed protein -
15 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
16 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
17 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
18 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
19 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
20 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1


Gene co-expression network
sample Sobic008G018500 Sobic008G018500 Sobic001G358500 Sobic001G358500 Sobic008G018500--Sobic001G358500 Sobic002G428100 Sobic002G428100 Sobic008G018500--Sobic002G428100 Sobic007G208000 Sobic007G208000 Sobic008G018500--Sobic007G208000 Sobic003G222700 Sobic003G222700 Sobic008G018500--Sobic003G222700 Sobic004G084500 Sobic004G084500 Sobic008G018500--Sobic004G084500 Sobic001G389200 Sobic001G389200 Sobic008G018500--Sobic001G389200 Sobic009G199500 Sobic009G199500 Sobic008G018500--Sobic009G199500 Sobic001G428800 Sobic001G428800 Sobic008G018500--Sobic001G428800 Sobic003G394200 Sobic003G394200 Sobic008G018500--Sobic003G394200 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic001G099900 Sobic001G099900 Sobic002G428100--Sobic001G099900 Sobic002G428100--Sobic001G211900 Sobic002G428100--Sobic008G018500 Sobic009G077600 Sobic009G077600 Sobic002G428100--Sobic009G077600 Sobic004G059400 Sobic004G059400 Sobic002G428100--Sobic004G059400 Sobic002G131400 Sobic002G131400 Sobic002G428100--Sobic002G131400 Sobic003G025600 Sobic003G025600 Sobic002G428100--Sobic003G025600 Sobic003G146600 Sobic003G146600 Sobic002G428100--Sobic003G146600 Sobic008G055900 Sobic008G055900 Sobic002G428100--Sobic008G055900 Sobic004G060300 Sobic004G060300 Sobic007G208000--Sobic004G060300 Sobic007G208000--Sobic010G192600 Sobic007G208000--Sobic008G018500 Sobic010G250000 Sobic010G250000 Sobic007G208000--Sobic010G250000 Sobic002G029300 Sobic002G029300 Sobic007G208000--Sobic002G029300 Sobic001G455000 Sobic001G455000 Sobic007G208000--Sobic001G455000 Sobic003G005900 Sobic003G005900 Sobic007G208000--Sobic003G005900 Sobic007G208000--Sobic001G358500 Sobic010G028400 Sobic010G028400 Sobic007G208000--Sobic010G028400 Sobic004G256300 Sobic004G256300 Sobic003G222700--Sobic004G256300 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic007G022700 Sobic007G022700 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic001G229300 Sobic001G229300 Sobic003G222700--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic004G084500--Sobic003G394200 Sobic004G084500--Sobic004G060300 Sobic009G122500 Sobic009G122500 Sobic004G084500--Sobic009G122500 Sobic001G193100 Sobic001G193100 Sobic004G084500--Sobic001G193100 Sobic004G345400 Sobic004G345400 Sobic004G084500--Sobic004G345400 Sobic003G398400 Sobic003G398400 Sobic004G084500--Sobic003G398400 Sobic010G074900 Sobic010G074900 Sobic004G084500--Sobic010G074900 Sobic006G128100 Sobic006G128100 Sobic004G084500--Sobic006G128100 Sobic006G224300 Sobic006G224300 Sobic004G084500--Sobic006G224300 Sobic006G060000 Sobic006G060000 Sobic001G389200--Sobic006G060000 Sobic008G168200 Sobic008G168200 Sobic001G389200--Sobic008G168200 Sobic002G395500 Sobic002G395500 Sobic001G389200--Sobic002G395500 Sobic002G355800 Sobic002G355800 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic007G172700 Sobic007G172700 Sobic001G389200--Sobic007G172700 Sobic010G169900 Sobic010G169900 Sobic001G389200--Sobic010G169900 Sobic001G389200--Sobic009G122500 Sobic007G158900 Sobic007G158900 Sobic009G199500--Sobic007G158900 Sobic009G227100 Sobic009G227100 Sobic009G199500--Sobic009G227100 Sobic003G445200 Sobic003G445200 Sobic009G199500--Sobic003G445200 Sobic002G299100 Sobic002G299100 Sobic009G199500--Sobic002G299100 Sobic009G199500--Sobic002G131400 Sobic004G122900 Sobic004G122900 Sobic009G199500--Sobic004G122900 Sobic004G084400 Sobic004G084400 Sobic009G199500--Sobic004G084400 Sobic001G043200 Sobic001G043200 Sobic009G199500--Sobic001G043200 Sobic002G398500 Sobic002G398500 Sobic009G199500--Sobic002G398500 Sobic001G428800--Sobic001G358500 Sobic001G449900 Sobic001G449900 Sobic001G428800--Sobic001G449900 Sobic010G230600 Sobic010G230600 Sobic001G428800--Sobic010G230600 Sobic004G092500 Sobic004G092500 Sobic001G428800--Sobic004G092500 Sobic010G223300 Sobic010G223300 Sobic001G428800--Sobic010G223300 Sobic001G428800--Sobic001G211900 Sobic001G428800--Sobic001G099900 Sobic010G020400 Sobic010G020400 Sobic001G428800--Sobic010G020400 Sobic009G139300 Sobic009G139300 Sobic001G428800--Sobic009G139300 Sobic003G394200--Sobic004G084500 Sobic006G203300 Sobic006G203300 Sobic003G394200--Sobic006G203300 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G270600 Sobic003G270600 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000
Octagon: transcription factors


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