Gene annotation
Transcriptome id Sobic.001G211900.2,Sobic.001G211900.4,Sobic.001G211900.5,Sobic.001G211900.3,Sobic.001G211900.1
Synonym ATPRMT6, Sb01g018730, PRMT6
Functional annotation methyltransferase, putative, expressed
UniProt A0A097PR88 , A0A1B6QK28
Pfam PF13847
Panther DB PTHR11006 PTHR11006:SF56
NCBI CDD KOG1499; Protein arginine N-methyltransferase PRMT1 and related enzymes
KEGG Orthology K11437; type I protein arginine methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0006479protein methylation


Orthologs (automatic annotation)
TAIR AT3G20020 : protein arginine methyltransferase 6
RAP-DB (Rice) LOC_Os10g34740.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a006519
Brachypodium KQJ97214 , PNT67610
Barley HORVU1Hr1G044440.7 , HORVU1Hr1G044440.6 , HORVU1Hr1G044440.5 , HORVU1Hr1G044440.4 , HORVU1Hr1G044440.3 , HORVU1Hr1G044440.2 , HORVU1Hr1G044440.1 , HORVU1Hr1G044440.9 , HORVU1Hr1G044440.8 , HORVU1Hr1G044440.16 , HORVU1Hr1G044440.15 , HORVU1Hr1G044440.14 , HORVU1Hr1G044440.13 , HORVU1Hr1G044440.12 , HORVU1Hr1G044440.11 , HORVU1Hr1G044440.10
Wheat TraesCS1D02G172200 , TraesCS1B02G185000 , TraesCS1B02G185000 , TraesCS1A02G171700
Populus -


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cDNA sequences
Sobic.001G211900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
2 Sobic.010G223400 expressed protein -
3 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
4 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
5 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
6 Sobic.001G358500 GA20734-PA, putative, expressed -
7 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
8 Sobic.010G230600 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
9 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
10 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
11 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
12 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
13 Sobic.008G085700 exocyst complex component 5, putative, expressed -
14 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
15 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
16 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
17 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
18 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
19 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
20 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9


Gene co-expression network
sample Sobic001G211900 Sobic001G211900 Sobic001G049400 Sobic001G049400 Sobic001G211900--Sobic001G049400 Sobic010G223400 Sobic010G223400 Sobic001G211900--Sobic010G223400 Sobic001G428800 Sobic001G428800 Sobic001G211900--Sobic001G428800 Sobic001G467100 Sobic001G467100 Sobic001G211900--Sobic001G467100 Sobic001G099900 Sobic001G099900 Sobic001G211900--Sobic001G099900 Sobic001G358500 Sobic001G358500 Sobic001G211900--Sobic001G358500 Sobic001G449900 Sobic001G449900 Sobic001G211900--Sobic001G449900 Sobic010G230600 Sobic010G230600 Sobic001G211900--Sobic010G230600 Sobic010G223300 Sobic010G223300 Sobic001G211900--Sobic010G223300 Sobic010G020400 Sobic010G020400 Sobic001G049400--Sobic010G020400 Sobic001G465400 Sobic001G465400 Sobic001G049400--Sobic001G465400 Sobic008G085700 Sobic008G085700 Sobic001G049400--Sobic008G085700 Sobic004G078700 Sobic004G078700 Sobic001G049400--Sobic004G078700 Sobic001G049400--Sobic001G211900 Sobic003G302200 Sobic003G302200 Sobic001G049400--Sobic003G302200 Sobic008G055900 Sobic008G055900 Sobic001G049400--Sobic008G055900 Sobic003G338500 Sobic003G338500 Sobic001G049400--Sobic003G338500 Sobic007G173700 Sobic007G173700 Sobic001G049400--Sobic007G173700 Sobic009G122500 Sobic009G122500 Sobic010G223400--Sobic009G122500 Sobic003G394200 Sobic003G394200 Sobic010G223400--Sobic003G394200 Sobic005G059500 Sobic005G059500 Sobic010G223400--Sobic005G059500 Sobic001G193100 Sobic001G193100 Sobic010G223400--Sobic001G193100 Sobic003G182300 Sobic003G182300 Sobic010G223400--Sobic003G182300 Sobic005G114500 Sobic005G114500 Sobic010G223400--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic010G223400--Sobic001G474400 Sobic010G223400--Sobic004G078700 Sobic001G012900 Sobic001G012900 Sobic010G223400--Sobic001G012900 Sobic001G428800--Sobic001G358500 Sobic001G428800--Sobic001G449900 Sobic001G428800--Sobic010G230600 Sobic004G092500 Sobic004G092500 Sobic001G428800--Sobic004G092500 Sobic001G428800--Sobic010G223300 Sobic001G428800--Sobic001G211900 Sobic001G428800--Sobic001G099900 Sobic001G428800--Sobic010G020400 Sobic009G139300 Sobic009G139300 Sobic001G428800--Sobic009G139300 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G467100--Sobic001G474400 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic001G099900--Sobic004G208500 Sobic001G015400 Sobic001G015400 Sobic001G099900--Sobic001G015400 Sobic001G099900--Sobic001G467100 Sobic002G150700 Sobic002G150700 Sobic001G099900--Sobic002G150700 Sobic003G146600 Sobic003G146600 Sobic001G099900--Sobic003G146600 Sobic001G099900--Sobic001G474400 Sobic001G099900--Sobic001G428800 Sobic006G142400 Sobic006G142400 Sobic001G099900--Sobic006G142400 Sobic001G156900 Sobic001G156900 Sobic001G099900--Sobic001G156900 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic001G358500--Sobic008G085700 Sobic001G358500--Sobic001G467100 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G358500--Sobic001G049400 Sobic001G358500--Sobic001G211900 Sobic001G449900--Sobic010G223300 Sobic002G020700 Sobic002G020700 Sobic001G449900--Sobic002G020700 Sobic001G449900--Sobic008G085700 Sobic001G301200 Sobic001G301200 Sobic001G449900--Sobic001G301200 Sobic003G189600 Sobic003G189600 Sobic001G449900--Sobic003G189600 Sobic001G449900--Sobic001G428800 Sobic003G029600 Sobic003G029600 Sobic001G449900--Sobic003G029600 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500 Sobic010G230600--Sobic001G428800 Sobic010G230600--Sobic001G449900 Sobic007G162100 Sobic007G162100 Sobic010G230600--Sobic007G162100 Sobic010G230600--Sobic010G020400 Sobic010G230600--Sobic006G039400 Sobic010G230600--Sobic004G092500 Sobic010G230600--Sobic001G156900 Sobic007G125000 Sobic007G125000 Sobic010G230600--Sobic007G125000 Sobic010G230600--Sobic008G085700 Sobic010G223300--Sobic008G055900 Sobic010G223300--Sobic001G449900 Sobic010G223300--Sobic002G020700 Sobic010G223300--Sobic003G338500 Sobic006G260500 Sobic006G260500 Sobic010G223300--Sobic006G260500 Sobic010G223300--Sobic004G092500 Sobic010G223300--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic010G223300--Sobic002G008800 Sobic006G180000 Sobic006G180000 Sobic010G223300--Sobic006G180000
Octagon: transcription factors


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