Gene annotation
Transcriptome id Sobic.002G428100.2
Synonym ATTIM44-2, Sb02g043830, TIM44-2
Functional annotation tim44-like domain containing protein, expressed
UniProt C5X6E8
Pfam PF04280
Panther DB PTHR10721
NCBI CDD KOG2580; Mitochondrial import inner membrane translocase, subunit TIM44
KEGG Orthology K17804; mitochondrial import inner membrane translocase subunit TIM44
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36070 : translocase inner membrane subunit 44-2
RAP-DB (Rice) LOC_Os07g22700.2 : tim44-like domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015501
Brachypodium KQK15108
Barley HORVU2Hr1G029260.14 , HORVU2Hr1G029260.11 , HORVU2Hr1G029260.10 , HORVU2Hr1G029260.12 , HORVU2Hr1G029260.15 , HORVU2Hr1G029260.17 , HORVU2Hr1G029260.16 , HORVU2Hr1G029260.9 , HORVU2Hr1G029260.8 , HORVU2Hr1G029260.5 , HORVU2Hr1G029260.4 , HORVU2Hr1G029260.7 , HORVU2Hr1G029260.6 , HORVU2Hr1G029260.1 , HORVU2Hr1G029260.3 , HORVU2Hr1G029260.2 , HORVU2Hr1G029260.13
Wheat TraesCS2D02G167900 , TraesCS2D02G167900 , TraesCS2B02G186800 , TraesCS2B02G186800 , TraesCS2A02G160500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
2 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
3 Sobic.008G018500 expressed protein -
4 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
5 Sobic.004G059400 TATA-binding protein-associated factor TAFII55 family protein, putative, expressed K03132: transcription initiation factor TFIID subunit 7
6 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
7 Sobic.003G025600 POLD3 - Putative DNA polymerase delta complex subunit, expressed K03504: DNA polymerase delta subunit 3
8 Sobic.003G146600 pumilio-family RNA binding repeat containing protein, expressed K14790: nucleolar protein 9
9 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
10 Sobic.007G126500 - K14808: DDX54, ATP-dependent RNA helicase DDX54/DBP10
11 Sobic.008G185800 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
12 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
13 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
14 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
15 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
16 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
17 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
18 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
19 Sobic.001G017700 diphthamide biosynthesis protein, putative, expressed K17866: diphthamide biosynthesis protein 2
20 Sobic.001G382600 expressed protein -


Gene co-expression network
sample Sobic002G428100 Sobic002G428100 Sobic001G099900 Sobic001G099900 Sobic002G428100--Sobic001G099900 Sobic001G211900 Sobic001G211900 Sobic002G428100--Sobic001G211900 Sobic008G018500 Sobic008G018500 Sobic002G428100--Sobic008G018500 Sobic009G077600 Sobic009G077600 Sobic002G428100--Sobic009G077600 Sobic004G059400 Sobic004G059400 Sobic002G428100--Sobic004G059400 Sobic002G131400 Sobic002G131400 Sobic002G428100--Sobic002G131400 Sobic003G025600 Sobic003G025600 Sobic002G428100--Sobic003G025600 Sobic003G146600 Sobic003G146600 Sobic002G428100--Sobic003G146600 Sobic008G055900 Sobic008G055900 Sobic002G428100--Sobic008G055900 Sobic004G208500 Sobic004G208500 Sobic001G099900--Sobic004G208500 Sobic001G015400 Sobic001G015400 Sobic001G099900--Sobic001G015400 Sobic001G467100 Sobic001G467100 Sobic001G099900--Sobic001G467100 Sobic002G150700 Sobic002G150700 Sobic001G099900--Sobic002G150700 Sobic001G099900--Sobic003G146600 Sobic001G474400 Sobic001G474400 Sobic001G099900--Sobic001G474400 Sobic001G428800 Sobic001G428800 Sobic001G099900--Sobic001G428800 Sobic006G142400 Sobic006G142400 Sobic001G099900--Sobic006G142400 Sobic001G156900 Sobic001G156900 Sobic001G099900--Sobic001G156900 Sobic001G049400 Sobic001G049400 Sobic001G211900--Sobic001G049400 Sobic010G223400 Sobic010G223400 Sobic001G211900--Sobic010G223400 Sobic001G211900--Sobic001G428800 Sobic001G211900--Sobic001G467100 Sobic001G211900--Sobic001G099900 Sobic001G358500 Sobic001G358500 Sobic001G211900--Sobic001G358500 Sobic001G449900 Sobic001G449900 Sobic001G211900--Sobic001G449900 Sobic010G230600 Sobic010G230600 Sobic001G211900--Sobic010G230600 Sobic010G223300 Sobic010G223300 Sobic001G211900--Sobic010G223300 Sobic008G018500--Sobic001G358500 Sobic008G018500--Sobic002G428100 Sobic007G208000 Sobic007G208000 Sobic008G018500--Sobic007G208000 Sobic003G222700 Sobic003G222700 Sobic008G018500--Sobic003G222700 Sobic004G084500 Sobic004G084500 Sobic008G018500--Sobic004G084500 Sobic001G389200 Sobic001G389200 Sobic008G018500--Sobic001G389200 Sobic009G199500 Sobic009G199500 Sobic008G018500--Sobic009G199500 Sobic008G018500--Sobic001G428800 Sobic003G394200 Sobic003G394200 Sobic008G018500--Sobic003G394200 Sobic003G209200 Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic009G077600--Sobic008G055900 Sobic006G260500 Sobic006G260500 Sobic009G077600--Sobic006G260500 Sobic004G207900 Sobic004G207900 Sobic009G077600--Sobic004G207900 Sobic004G100200 Sobic004G100200 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic007G005500 Sobic007G005500 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic009G077600--Sobic010G223300 Sobic003G132000 Sobic003G132000 Sobic004G059400--Sobic003G132000 Sobic004G059400--Sobic002G428100 Sobic009G089700 Sobic009G089700 Sobic004G059400--Sobic009G089700 Sobic004G059400--Sobic001G358500 Sobic004G059400--Sobic001G428800 Sobic009G139300 Sobic009G139300 Sobic004G059400--Sobic009G139300 Sobic004G059400--Sobic008G018500 Sobic003G193500 Sobic003G193500 Sobic004G059400--Sobic003G193500 Sobic001G404200 Sobic001G404200 Sobic004G059400--Sobic001G404200 Sobic004G122900 Sobic004G122900 Sobic002G131400--Sobic004G122900 Sobic002G131400--Sobic001G467100 Sobic002G131400--Sobic009G199500 Sobic002G131400--Sobic001G211900 Sobic002G131400--Sobic001G099900 Sobic002G364900 Sobic002G364900 Sobic002G131400--Sobic002G364900 Sobic001G405600 Sobic001G405600 Sobic002G131400--Sobic001G405600 Sobic007G105900 Sobic007G105900 Sobic002G131400--Sobic007G105900 Sobic003G181700 Sobic003G181700 Sobic002G131400--Sobic003G181700 Sobic002G361400 Sobic002G361400 Sobic003G025600--Sobic002G361400 Sobic002G111600 Sobic002G111600 Sobic003G025600--Sobic002G111600 Sobic006G200700 Sobic006G200700 Sobic003G025600--Sobic006G200700 Sobic006G195700 Sobic006G195700 Sobic003G025600--Sobic006G195700 Sobic003G025600--Sobic002G428100 Sobic007G184500 Sobic007G184500 Sobic003G025600--Sobic007G184500 Sobic010G204400 Sobic010G204400 Sobic003G025600--Sobic010G204400 Sobic004G178200 Sobic004G178200 Sobic003G025600--Sobic004G178200 Sobic007G093800 Sobic007G093800 Sobic003G025600--Sobic007G093800 Sobic003G308500 Sobic003G308500 Sobic003G146600--Sobic003G308500 Sobic004G224600 Sobic004G224600 Sobic003G146600--Sobic004G224600 Sobic006G002800 Sobic006G002800 Sobic003G146600--Sobic006G002800 Sobic002G235200 Sobic002G235200 Sobic003G146600--Sobic002G235200 Sobic001G145400 Sobic001G145400 Sobic003G146600--Sobic001G145400 Sobic003G146600--Sobic002G150700 Sobic001G065100 Sobic001G065100 Sobic003G146600--Sobic001G065100 Sobic003G039000 Sobic003G039000 Sobic003G146600--Sobic003G039000 Sobic003G012000 Sobic003G012000 Sobic003G146600--Sobic003G012000 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G085700 Sobic008G085700 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.