Gene annotation
Transcriptome id Sobic.001G030000.1,Sobic.001G030000.2
Synonym DEX1, Sb01g002810
Functional annotation FG-GAP repeat-containing protein, putative, expressed
UniProt C5WU50 , A0A1B6QH33
Pfam PF01839
Panther DB PTHR21419 PTHR21419:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09090 : defective in exine formation protein (DEX1)
RAP-DB (Rice) LOC_Os03g61050.1 : FG-GAP repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008863
Brachypodium KQK12385
Barley HORVU5Hr1G114910.5 , HORVU5Hr1G114910.4 , HORVU5Hr1G114910.3 , HORVU5Hr1G114910.2 , HORVU5Hr1G114910.1
Wheat TraesCS5B02G501200 , TraesCS5B02G501200 , TraesCS5A02G487400 , TraesCS5D02G501700 , TraesCS5D02G501700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G308400 expressed protein -
2 Sobic.004G141800 expressed protein -
3 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.003G043000 expressed protein -
5 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
6 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
7 Sobic.005G110499 - K14006: protein transport protein SEC23
8 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
9 Sobic.003G163200 expressed protein K11654: SMARCA5, SNF2H, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
10 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
11 Sobic.003G113300 expressed protein -
12 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
13 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
14 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
15 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
16 Sobic.009G249700 expressed protein -
17 Sobic.005G114500 growth regulator related protein, putative, expressed -
18 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
20 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic001G030000 Sobic001G030000 Sobic001G308400 Sobic001G308400 Sobic001G030000--Sobic001G308400 Sobic004G141800 Sobic004G141800 Sobic001G030000--Sobic004G141800 Sobic010G169900 Sobic010G169900 Sobic001G030000--Sobic010G169900 Sobic003G043000 Sobic003G043000 Sobic001G030000--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic001G030000--Sobic004G265500 Sobic002G227500 Sobic002G227500 Sobic001G030000--Sobic002G227500 Sobic005G110499 Sobic005G110499 Sobic001G030000--Sobic005G110499 Sobic003G405500 Sobic003G405500 Sobic001G030000--Sobic003G405500 Sobic003G163200 Sobic003G163200 Sobic001G030000--Sobic003G163200 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic002G430300 Sobic002G430300 Sobic004G141800--Sobic002G430300 Sobic004G141800--Sobic003G405500 Sobic004G236800 Sobic004G236800 Sobic004G141800--Sobic004G236800 Sobic004G141800--Sobic002G227500 Sobic004G141800--Sobic001G030000 Sobic003G143800 Sobic003G143800 Sobic004G141800--Sobic003G143800 Sobic003G312700 Sobic003G312700 Sobic004G141800--Sobic003G312700 Sobic001G035200 Sobic001G035200 Sobic004G141800--Sobic001G035200 Sobic002G386600 Sobic002G386600 Sobic004G141800--Sobic002G386600 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic010G169900--Sobic002G227500 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic001G490900 Sobic001G490900 Sobic010G169900--Sobic001G490900 Sobic003G043000--Sobic004G265500 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic003G043000--Sobic004G357100 Sobic003G241700 Sobic003G241700 Sobic003G043000--Sobic003G241700 Sobic009G228000 Sobic009G228000 Sobic003G043000--Sobic009G228000 Sobic003G043000--SobicK028600 Sobic003G043000--Sobic003G163200 Sobic003G043000--Sobic002G227500 Sobic004G265500--Sobic003G043000 Sobic004G265500--Sobic003G163200 Sobic004G265500--Sobic001G308400 Sobic004G265500--Sobic004G357100 Sobic010G000800 Sobic010G000800 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 Sobic004G265500--SobicK028600 Sobic004G265500--Sobic002G227500 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic002G227500--Sobic010G169900 Sobic002G227500--Sobic004G265500 Sobic002G227500--Sobic003G043000 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic001G474400 Sobic001G474400 Sobic005G110499--Sobic001G474400 Sobic005G110499--Sobic001G308400 Sobic005G110499--Sobic003G394200 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic003G209200 Sobic003G209200 Sobic005G110499--Sobic003G209200 Sobic001G145400 Sobic001G145400 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic003G405500--Sobic010G059500 Sobic003G314700 Sobic003G314700 Sobic003G405500--Sobic003G314700 Sobic003G163200--Sobic004G265500 Sobic003G163200--Sobic002G042600 Sobic003G163200--Sobic010G000800 Sobic003G163200--Sobic003G043000 Sobic002G179400 Sobic002G179400 Sobic003G163200--Sobic002G179400 Sobic010G223100 Sobic010G223100 Sobic003G163200--Sobic010G223100 Sobic002G429300 Sobic002G429300 Sobic003G163200--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic003G163200--Sobic006G184900 Sobic004G204100 Sobic004G204100 Sobic003G163200--Sobic004G204100
Octagon: transcription factors


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