Gene annotation
Transcriptome id Sobic.001G156900.1
Synonym Sb01g013670, TRB1, ATTRB1
Functional annotation single myb histone, putative, expressed
UniProt A0A1B6QJ59
Pfam PF00249 PF00538
Panther DB PTHR21717 PTHR21717:SF19
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology GO:0006334; nucleosome assembly GO:0005634nucleus GO:0003677DNA binding GO:0000786nucleosome


Orthologs (automatic annotation)
TAIR AT1G49950 : telomere repeat binding factor 1
RAP-DB (Rice) LOC_Os12g41920.1 : single myb histone, putative, expressed
MaizeGDB (Corn) Zm00025a017255 , Zm00025a023345
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G122500 expressed protein -
2 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.001G308400 expressed protein -
4 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
5 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
6 Sobic.001G335000 erlin-2 precursor, putative, expressed -
7 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
8 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
9 Sobic.005G110499 - K14006: protein transport protein SEC23
10 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
11 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
12 Sobic.010G230600 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
13 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
14 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
15 Sobic.001G384400 glucosyltransferase, putative, expressed K03848: alpha-1,3-glucosyltransferase
16 Sobic.010G000800 PHD-finger domain containing protein, expressed -
17 Sobic.001G358500 GA20734-PA, putative, expressed -
18 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
19 Sobic.010G223400 expressed protein -
20 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -


Gene co-expression network
sample Sobic001G156900 Sobic001G156900 Sobic009G122500 Sobic009G122500 Sobic001G156900--Sobic009G122500 Sobic002G119600 Sobic002G119600 Sobic001G156900--Sobic002G119600 Sobic001G308400 Sobic001G308400 Sobic001G156900--Sobic001G308400 Sobic002G227500 Sobic002G227500 Sobic001G156900--Sobic002G227500 Sobic004G122900 Sobic004G122900 Sobic001G156900--Sobic004G122900 Sobic001G335000 Sobic001G335000 Sobic001G156900--Sobic001G335000 Sobic010G169900 Sobic010G169900 Sobic001G156900--Sobic010G169900 Sobic003G181700 Sobic003G181700 Sobic001G156900--Sobic003G181700 Sobic005G110499 Sobic005G110499 Sobic001G156900--Sobic005G110499 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic002G119600--Sobic001G156900 Sobic010G139500 Sobic010G139500 Sobic002G119600--Sobic010G139500 Sobic007G145400 Sobic007G145400 Sobic002G119600--Sobic007G145400 Sobic004G204100 Sobic004G204100 Sobic002G119600--Sobic004G204100 Sobic010G000800 Sobic010G000800 Sobic002G119600--Sobic010G000800 Sobic002G412700 Sobic002G412700 Sobic002G119600--Sobic002G412700 Sobic002G119600--Sobic005G110499 Sobic001G248100 Sobic001G248100 Sobic002G119600--Sobic001G248100 Sobic003G334700 Sobic003G334700 Sobic002G119600--Sobic003G334700 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G308400--Sobic001G156900 Sobic001G308400--Sobic003G394200 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic002G227500--Sobic010G169900 Sobic002G227500--Sobic004G265500 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500 Sobic004G122900--Sobic003G181700 Sobic004G122900--Sobic009G122500 Sobic009G194000 Sobic009G194000 Sobic004G122900--Sobic009G194000 Sobic004G122900--Sobic001G156900 Sobic001G043200 Sobic001G043200 Sobic004G122900--Sobic001G043200 Sobic004G122900--Sobic001G335000 Sobic004G122900--Sobic001G308400 Sobic004G122900--Sobic003G021600 Sobic004G122900--Sobic002G227500 Sobic001G335000--Sobic009G122500 Sobic001G335000--Sobic004G060300 Sobic001G335000--Sobic001G156900 Sobic001G335000--Sobic004G122900 Sobic001G012900 Sobic001G012900 Sobic001G335000--Sobic001G012900 Sobic001G335000--Sobic001G043200 Sobic001G193100 Sobic001G193100 Sobic001G335000--Sobic001G193100 Sobic001G335000--Sobic003G181700 Sobic007G118500 Sobic007G118500 Sobic001G335000--Sobic007G118500 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic010G169900--Sobic002G227500 Sobic010G169900--Sobic006G128100 Sobic010G169900--Sobic009G194000 Sobic010G169900--Sobic001G389200 Sobic001G490900 Sobic001G490900 Sobic010G169900--Sobic001G490900 Sobic003G181700--Sobic009G194000 Sobic003G181700--Sobic003G021600 Sobic003G181700--Sobic004G122900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic003G181700--Sobic002G227500 Sobic006G060000 Sobic006G060000 Sobic003G181700--Sobic006G060000 Sobic003G181700--Sobic009G122500 Sobic007G172700 Sobic007G172700 Sobic003G181700--Sobic007G172700 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic001G474400 Sobic001G474400 Sobic005G110499--Sobic001G474400 Sobic005G110499--Sobic001G308400 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic003G209200 Sobic003G209200 Sobic005G110499--Sobic003G209200
Octagon: transcription factors


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