Gene annotation
Transcriptome id Sobic.001G335000.1
Synonym Sb01g032340
Functional annotation erlin-2 precursor, putative, expressed
UniProt C5WWI9
Pfam PF01145
Panther DB PTHR15351
NCBI CDD KOG2962; Prohibitin-related membrane protease subunits
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03510 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os03g30790.1 : erlin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a052191 , Zm00025a002886
Brachypodium KQK14436
Barley HORVU4Hr1G039810.5 , HORVU4Hr1G039810.4 , HORVU4Hr1G039810.1 , HORVU4Hr1G039810.3 , HORVU4Hr1G039810.2
Wheat TraesCS4D02G154700 , TraesCS4A02G144000 , TraesCS4B02G152900 , TraesCS4D02G154700
Populus -


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cDNA sequences
Sobic.001G335000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G122500 expressed protein -
2 Sobic.004G060300 DNA binding protein, putative, expressed -
3 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
5 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
6 Sobic.001G043200 expressed protein -
7 Sobic.001G193100 expressed protein -
8 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
9 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
10 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
11 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
12 Sobic.010G223400 expressed protein -
13 Sobic.005G059500 expressed protein -
14 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
15 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
16 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
17 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
18 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
19 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
20 Sobic.006G103700 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase


Gene co-expression network
sample Sobic001G335000 Sobic001G335000 Sobic009G122500 Sobic009G122500 Sobic001G335000--Sobic009G122500 Sobic004G060300 Sobic004G060300 Sobic001G335000--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic001G335000--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic001G335000--Sobic004G122900 Sobic001G012900 Sobic001G012900 Sobic001G335000--Sobic001G012900 Sobic001G043200 Sobic001G043200 Sobic001G335000--Sobic001G043200 Sobic001G193100 Sobic001G193100 Sobic001G335000--Sobic001G193100 Sobic003G181700 Sobic003G181700 Sobic001G335000--Sobic003G181700 Sobic007G118500 Sobic007G118500 Sobic001G335000--Sobic007G118500 Sobic009G122500--Sobic001G335000 Sobic009G122500--Sobic004G060300 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic004G060300--Sobic007G118500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic004G060300--Sobic001G335000 Sobic003G346400 Sobic003G346400 Sobic004G060300--Sobic003G346400 Sobic007G030100 Sobic007G030100 Sobic004G060300--Sobic007G030100 Sobic004G060300--Sobic001G389200 Sobic004G084500 Sobic004G084500 Sobic004G060300--Sobic004G084500 Sobic004G060300--Sobic001G012900 Sobic001G156900--Sobic009G122500 Sobic002G119600 Sobic002G119600 Sobic001G156900--Sobic002G119600 Sobic001G156900--Sobic001G308400 Sobic002G227500 Sobic002G227500 Sobic001G156900--Sobic002G227500 Sobic001G156900--Sobic004G122900 Sobic001G156900--Sobic001G335000 Sobic010G169900 Sobic010G169900 Sobic001G156900--Sobic010G169900 Sobic001G156900--Sobic003G181700 Sobic005G110499 Sobic005G110499 Sobic001G156900--Sobic005G110499 Sobic004G122900--Sobic003G181700 Sobic004G122900--Sobic009G122500 Sobic009G194000 Sobic009G194000 Sobic004G122900--Sobic009G194000 Sobic004G122900--Sobic001G156900 Sobic004G122900--Sobic001G043200 Sobic004G122900--Sobic001G335000 Sobic004G122900--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic004G122900--Sobic003G021600 Sobic004G122900--Sobic002G227500 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G012900--Sobic001G193100 Sobic005G059500 Sobic005G059500 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic005G123400 Sobic005G123400 Sobic001G043200--Sobic005G123400 Sobic003G190200 Sobic003G190200 Sobic001G043200--Sobic003G190200 Sobic001G043200--Sobic003G021600 Sobic001G043200--Sobic003G394500 Sobic001G043200--Sobic009G122500 Sobic001G043200--Sobic007G030100 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic001G193100--Sobic010G223400 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic001G193100--Sobic004G084500 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic003G181700--Sobic009G194000 Sobic003G181700--Sobic003G021600 Sobic003G181700--Sobic004G122900 Sobic001G490900 Sobic001G490900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic003G181700--Sobic002G227500 Sobic006G060000 Sobic006G060000 Sobic003G181700--Sobic006G060000 Sobic003G181700--Sobic009G122500 Sobic007G172700 Sobic007G172700 Sobic003G181700--Sobic007G172700 Sobic007G118500--Sobic003G394500 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic010G133400 Sobic010G133400 Sobic007G118500--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G118500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic001G356100 Sobic001G356100 Sobic007G118500--Sobic001G356100 Sobic008G171400 Sobic008G171400 Sobic007G118500--Sobic008G171400
Octagon: transcription factors


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