Gene annotation
Transcriptome id Sobic.001G043200.1
Synonym Sb01g003980
Functional annotation expressed protein
UniProt C5WW16
Pfam -
Panther DB PTHR36050 PTHR36050:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17430 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os10g41180.1 : expressed protein
MaizeGDB (Corn) Zm00025a003308
Brachypodium PNT67888 , KQJ97805
Barley HORVU1Hr1G056000.8 , HORVU1Hr1G056000.9 , HORVU1Hr1G056000.4 , HORVU1Hr1G056000.5 , HORVU1Hr1G056000.6 , HORVU1Hr1G056000.7 , HORVU1Hr1G056000.1 , HORVU1Hr1G056000.2 , HORVU1Hr1G056000.3
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.001G043200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G123400 expressed protein -
2 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
3 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
4 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
5 Sobic.009G122500 expressed protein -
6 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
7 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
8 Sobic.009G154900 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
9 Sobic.003G194800 EF hand family protein, putative, expressed -
10 Sobic.006G220400 exonuclease, putative, expressed -
11 Sobic.003G393200 expressed protein -
12 Sobic.009G040325 - -
13 Sobic.009G227100 expressed protein -
14 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
15 Sobic.009G040250 - -
16 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
17 Sobic.001G335000 erlin-2 precursor, putative, expressed -
18 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
19 Sobic.001G498800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
20 Sobic.007G204000 methyl-binding domain protein MBD, putative, expressed -


Gene co-expression network
sample Sobic001G043200 Sobic001G043200 Sobic005G123400 Sobic005G123400 Sobic001G043200--Sobic005G123400 Sobic003G190200 Sobic003G190200 Sobic001G043200--Sobic003G190200 Sobic003G021600 Sobic003G021600 Sobic001G043200--Sobic003G021600 Sobic003G394500 Sobic003G394500 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic007G030100 Sobic007G030100 Sobic001G043200--Sobic007G030100 Sobic004G122900 Sobic004G122900 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic009G252300 Sobic009G252300 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic003G190200--Sobic007G030100 Sobic003G190200--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic003G190200--Sobic007G172700 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G190200--Sobic003G393200 Sobic003G428000 Sobic003G428000 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic009G194000 Sobic009G194000 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G021600--Sobic003G394500 Sobic001G308400 Sobic001G308400 Sobic003G021600--Sobic001G308400 Sobic003G021600--Sobic001G043200 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic003G394500--Sobic001G385000 Sobic004G350700 Sobic004G350700 Sobic003G394500--Sobic004G350700 Sobic001G378800 Sobic001G378800 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic003G394500--Sobic001G424800 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic007G030100--Sobic001G385000 Sobic007G030100--Sobic007G172700 Sobic007G030100--Sobic001G424800 Sobic007G030100--Sobic006G232800 Sobic007G030100--Sobic003G428000 Sobic004G122900--Sobic003G181700 Sobic004G122900--Sobic009G122500 Sobic004G122900--Sobic009G194000 Sobic004G122900--Sobic001G156900 Sobic004G122900--Sobic001G043200 Sobic004G122900--Sobic001G335000 Sobic004G122900--Sobic001G308400 Sobic004G122900--Sobic003G021600 Sobic004G122900--Sobic002G227500 Sobic006G262800 Sobic006G262800 Sobic009G154900--Sobic006G262800 Sobic009G154900--Sobic001G043200 Sobic009G154900--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic009G154900--Sobic004G215600 Sobic004G007900 Sobic004G007900 Sobic009G154900--Sobic004G007900 Sobic009G108400 Sobic009G108400 Sobic009G154900--Sobic009G108400 Sobic004G194100 Sobic004G194100 Sobic009G154900--Sobic004G194100 Sobic001G448100 Sobic001G448100 Sobic009G154900--Sobic001G448100 Sobic009G154900--Sobic005G123400 Sobic008G085950 Sobic008G085950 Sobic003G194800--Sobic008G085950 Sobic008G047500 Sobic008G047500 Sobic003G194800--Sobic008G047500 Sobic009G120400 Sobic009G120400 Sobic003G194800--Sobic009G120400 Sobic003G204100 Sobic003G204100 Sobic003G194800--Sobic003G204100 Sobic002G173400 Sobic002G173400 Sobic003G194800--Sobic002G173400 Sobic003G299500 Sobic003G299500 Sobic003G194800--Sobic003G299500 Sobic007G105700 Sobic007G105700 Sobic003G194800--Sobic007G105700 Sobic003G194800--Sobic004G215600 Sobic003G420400 Sobic003G420400 Sobic003G194800--Sobic003G420400
Octagon: transcription factors


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