Gene annotation
Transcriptome id Sobic.001G498800.3,Sobic.001G498800.4,Sobic.001G498800.5
Synonym Sb01g046595
Functional annotation UAA transporter family domain containing protein, expressed
UniProt A0A1Z5SBB6
Pfam PF08449
Panther DB PTHR10231 PTHR10231:SF48
NCBI CDD KOG2234; Predicted UDP-galactose transporter
KEGG Orthology K15272; solute carrier family 35 (UDP-sugar transporter), member A1/2/3
Gene Ontology GO:0016021; integral component of membrane GO:0008643carbohydrate transport GO:0005351carbohydrate:proton symporter activity GO:0000139Golgi membrane


Orthologs (automatic annotation)
TAIR AT5G41760 : Nucleotide-sugar transporter family protein
RAP-DB (Rice) LOC_Os06g33210.1 : UAA transporter family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050852
Brachypodium KQK18065 , KQK18066
Barley HORVU7Hr1G089550.18 , HORVU7Hr1G089550.16 , HORVU7Hr1G089550.17 , HORVU7Hr1G089550.12 , HORVU7Hr1G089550.13 , HORVU7Hr1G089550.10 , HORVU7Hr1G089550.11 , HORVU7Hr1G089550.8 , HORVU7Hr1G089550.9 , HORVU7Hr1G089550.4 , HORVU7Hr1G089550.5 , HORVU7Hr1G089550.6 , HORVU7Hr1G089550.7 , HORVU7Hr1G089550.1 , HORVU7Hr1G089550.2 , HORVU7Hr1G089550.3
Wheat TraesCS7D02G371200 , TraesCS7A02G351700 , TraesCS7A02G351700 , TraesCS7B02G276400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
2 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
3 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
4 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
5 Sobic.001G043200 expressed protein -
6 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
7 Sobic.008G095900 ATP binding protein, putative, expressed K17592: sacsin
8 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
9 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
10 Sobic.001G205100 expressed protein -
11 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
12 Sobic.008G168200 expressed protein -
13 Sobic.004G350700 kelch repeat protein, putative, expressed -
14 Sobic.009G252300 expressed protein -
15 Sobic.008G022400 EMB2748, putative, expressed -
16 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
17 Sobic.007G204000 methyl-binding domain protein MBD, putative, expressed -
18 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
19 Sobic.003G004800 ATP binding protein, putative, expressed -
20 Sobic.004G194400 expressed protein -


Gene co-expression network
sample Sobic001G498800 Sobic001G498800 Sobic003G021600 Sobic003G021600 Sobic001G498800--Sobic003G021600 Sobic006G060000 Sobic006G060000 Sobic001G498800--Sobic006G060000 Sobic006G191000 Sobic006G191000 Sobic001G498800--Sobic006G191000 Sobic003G394500 Sobic003G394500 Sobic001G498800--Sobic003G394500 Sobic001G043200 Sobic001G043200 Sobic001G498800--Sobic001G043200 Sobic008G152700 Sobic008G152700 Sobic001G498800--Sobic008G152700 Sobic008G095900 Sobic008G095900 Sobic001G498800--Sobic008G095900 Sobic001G378800 Sobic001G378800 Sobic001G498800--Sobic001G378800 Sobic010G277700 Sobic010G277700 Sobic001G498800--Sobic010G277700 Sobic009G194000 Sobic009G194000 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G190200 Sobic003G190200 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G021600--Sobic003G394500 Sobic001G308400 Sobic001G308400 Sobic003G021600--Sobic001G308400 Sobic003G021600--Sobic001G043200 Sobic008G055500 Sobic008G055500 Sobic006G060000--Sobic008G055500 Sobic004G350700 Sobic004G350700 Sobic006G060000--Sobic004G350700 Sobic007G172700 Sobic007G172700 Sobic006G060000--Sobic007G172700 Sobic001G114200 Sobic001G114200 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic001G389200 Sobic001G389200 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic003G117800 Sobic003G117800 Sobic006G060000--Sobic003G117800 Sobic001G490900 Sobic001G490900 Sobic006G060000--Sobic001G490900 Sobic010G086300 Sobic010G086300 Sobic006G191000--Sobic010G086300 Sobic001G149000 Sobic001G149000 Sobic006G191000--Sobic001G149000 Sobic006G191000--Sobic003G394500 Sobic006G191000--Sobic008G152700 Sobic004G194400 Sobic004G194400 Sobic006G191000--Sobic004G194400 Sobic006G232800 Sobic006G232800 Sobic006G191000--Sobic006G232800 Sobic009G046900 Sobic009G046900 Sobic006G191000--Sobic009G046900 Sobic010G274800 Sobic010G274800 Sobic006G191000--Sobic010G274800 Sobic002G304700 Sobic002G304700 Sobic006G191000--Sobic002G304700 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G394500--Sobic003G190200 Sobic003G394500--Sobic006G232800 Sobic007G030100 Sobic007G030100 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic005G123400 Sobic005G123400 Sobic001G043200--Sobic005G123400 Sobic001G043200--Sobic003G190200 Sobic001G043200--Sobic003G021600 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic001G043200--Sobic007G030100 Sobic004G122900 Sobic004G122900 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic008G152700--Sobic001G149000 Sobic003G385300 Sobic003G385300 Sobic008G152700--Sobic003G385300 Sobic008G152700--Sobic003G117800 Sobic004G077300 Sobic004G077300 Sobic008G152700--Sobic004G077300 Sobic008G152700--Sobic009G046900 Sobic008G152700--Sobic007G172700 Sobic003G428000 Sobic003G428000 Sobic008G152700--Sobic003G428000 Sobic008G152700--Sobic003G394500 Sobic008G152700--Sobic001G385000 Sobic008G095900--Sobic004G194400 Sobic001G308500 Sobic001G308500 Sobic008G095900--Sobic001G308500 Sobic004G051600 Sobic004G051600 Sobic008G095900--Sobic004G051600 Sobic001G478900 Sobic001G478900 Sobic008G095900--Sobic001G478900 Sobic008G085950 Sobic008G085950 Sobic008G095900--Sobic008G085950 Sobic008G095900--Sobic006G191000 Sobic008G095900--Sobic010G086300 Sobic006G071362 Sobic006G071362 Sobic008G095900--Sobic006G071362 Sobic003G004800 Sobic003G004800 Sobic008G095900--Sobic003G004800 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic001G378800--Sobic004G350700 Sobic010G277700--Sobic006G071362 Sobic010G277700--Sobic004G194400 Sobic006G134500 Sobic006G134500 Sobic010G277700--Sobic006G134500 Sobic010G134650 Sobic010G134650 Sobic010G277700--Sobic010G134650 Sobic010G277700--Sobic009G046900 Sobic008G022400 Sobic008G022400 Sobic010G277700--Sobic008G022400 Sobic004G189000 Sobic004G189000 Sobic010G277700--Sobic004G189000 Sobic010G130601 Sobic010G130601 Sobic010G277700--Sobic010G130601 Sobic010G112600 Sobic010G112600 Sobic010G277700--Sobic010G112600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.