Gene annotation
Transcriptome id Sobic.001G205100.1
Synonym Sb01g018120
Functional annotation expressed protein
UniProt C5WX97
Pfam PF06159
Panther DB PTHR13134 PTHR13134:SF3
NCBI CDD KOG2625; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47960 : -
RAP-DB (Rice) LOC_Os10g35570.1 : expressed protein
MaizeGDB (Corn) Zm00025a037331 , Zm00025a006451
Brachypodium KQJ97304 , KQJ97303
Barley HORVU1Hr1G044820.3 , HORVU1Hr1G044820.11 , HORVU1Hr1G044820.10 , HORVU1Hr1G044820.13 , HORVU1Hr1G044820.12 , HORVU1Hr1G044820.15 , HORVU1Hr1G044820.14 , HORVU1Hr1G044820.9 , HORVU1Hr1G044820.8 , HORVU1Hr1G044820.5 , HORVU1Hr1G044820.4 , HORVU1Hr1G044820.7 , HORVU1Hr1G044820.6 , HORVU1Hr1G044820.1 , HORVU1Hr1G044820.2
Wheat TraesCS1A02G170300 , TraesCS1A02G170300 , TraesCS1B02G187000 , TraesCS1B02G187000 , TraesCS1B02G187000 , TraesCS1D02G168000 , TraesCS1D02G168000
Populus -


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cDNA sequences
Sobic.001G205100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G168200 expressed protein -
2 Sobic.008G097900 protein kinase domain containing protein, expressed -
3 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
4 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
5 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
6 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
7 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
8 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
9 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
10 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
11 Sobic.001G498800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
12 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
13 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
14 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
15 Sobic.001G411900 TBC domain containing protein, expressed -
16 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
17 Sobic.007G172700 ECT5, putative, expressed -
18 Sobic.001G532400 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
19 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
20 Sobic.004G350700 kelch repeat protein, putative, expressed -


Gene co-expression network
sample Sobic001G205100 Sobic001G205100 Sobic008G168200 Sobic008G168200 Sobic001G205100--Sobic008G168200 Sobic008G097900 Sobic008G097900 Sobic001G205100--Sobic008G097900 Sobic001G389200 Sobic001G389200 Sobic001G205100--Sobic001G389200 Sobic003G156400 Sobic003G156400 Sobic001G205100--Sobic003G156400 Sobic003G021600 Sobic003G021600 Sobic001G205100--Sobic003G021600 Sobic008G171400 Sobic008G171400 Sobic001G205100--Sobic008G171400 Sobic006G060000 Sobic006G060000 Sobic001G205100--Sobic006G060000 Sobic004G130400 Sobic004G130400 Sobic001G205100--Sobic004G130400 Sobic003G397900 Sobic003G397900 Sobic001G205100--Sobic003G397900 Sobic008G168200--Sobic001G389200 Sobic008G168200--Sobic001G205100 Sobic002G395500 Sobic002G395500 Sobic008G168200--Sobic002G395500 Sobic008G168200--Sobic006G060000 Sobic008G168200--Sobic003G156400 Sobic003G394500 Sobic003G394500 Sobic008G168200--Sobic003G394500 Sobic006G012700 Sobic006G012700 Sobic008G168200--Sobic006G012700 Sobic008G168200--Sobic008G171400 Sobic003G409900 Sobic003G409900 Sobic008G168200--Sobic003G409900 Sobic007G172700 Sobic007G172700 Sobic008G097900--Sobic007G172700 Sobic008G152700 Sobic008G152700 Sobic008G097900--Sobic008G152700 Sobic004G350700 Sobic004G350700 Sobic008G097900--Sobic004G350700 Sobic001G411900 Sobic001G411900 Sobic008G097900--Sobic001G411900 Sobic008G097900--Sobic001G205100 Sobic004G077300 Sobic004G077300 Sobic008G097900--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic008G097900--Sobic001G501900 Sobic001G253300 Sobic001G253300 Sobic008G097900--Sobic001G253300 Sobic002G117600 Sobic002G117600 Sobic008G097900--Sobic002G117600 Sobic001G389200--Sobic006G060000 Sobic001G389200--Sobic008G168200 Sobic001G389200--Sobic002G395500 Sobic002G355800 Sobic002G355800 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic001G389200--Sobic007G172700 Sobic010G169900 Sobic010G169900 Sobic001G389200--Sobic010G169900 Sobic009G122500 Sobic009G122500 Sobic001G389200--Sobic009G122500 Sobic001G047600 Sobic001G047600 Sobic003G156400--Sobic001G047600 Sobic003G156400--Sobic006G012700 Sobic003G156400--Sobic001G205100 Sobic003G156400--Sobic008G097900 Sobic003G156400--Sobic008G171400 Sobic003G156400--Sobic008G168200 Sobic003G156400--Sobic001G253300 Sobic003G156400--Sobic001G389200 Sobic003G365100 Sobic003G365100 Sobic003G156400--Sobic003G365100 Sobic009G194000 Sobic009G194000 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G190200 Sobic003G190200 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G021600--Sobic003G394500 Sobic001G308400 Sobic001G308400 Sobic003G021600--Sobic001G308400 Sobic001G043200 Sobic001G043200 Sobic003G021600--Sobic001G043200 Sobic008G171400--Sobic001G389200 Sobic007G118500 Sobic007G118500 Sobic008G171400--Sobic007G118500 Sobic003G202100 Sobic003G202100 Sobic008G171400--Sobic003G202100 Sobic001G304000 Sobic001G304000 Sobic008G171400--Sobic001G304000 Sobic010G133400 Sobic010G133400 Sobic008G171400--Sobic010G133400 Sobic008G171400--Sobic003G156400 Sobic008G171400--Sobic001G205100 Sobic009G260700 Sobic009G260700 Sobic008G171400--Sobic009G260700 Sobic008G171400--Sobic008G168200 Sobic008G055500 Sobic008G055500 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic006G060000--Sobic007G172700 Sobic001G114200 Sobic001G114200 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic003G117800 Sobic003G117800 Sobic006G060000--Sobic003G117800 Sobic001G490900 Sobic001G490900 Sobic006G060000--Sobic001G490900 Sobic004G130400--Sobic001G205100 Sobic009G162100 Sobic009G162100 Sobic004G130400--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic004G130400--Sobic005G177700 Sobic009G224000 Sobic009G224000 Sobic004G130400--Sobic009G224000 Sobic004G130400--Sobic001G047600 Sobic003G394200 Sobic003G394200 Sobic004G130400--Sobic003G394200 Sobic004G130400--Sobic001G411900 Sobic004G130400--Sobic008G097900 Sobic004G130400--Sobic004G078700 Sobic001G455000 Sobic001G455000 Sobic003G397900--Sobic001G455000 Sobic006G265600 Sobic006G265600 Sobic003G397900--Sobic006G265600 Sobic001G474400 Sobic001G474400 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic002G075900 Sobic002G075900 Sobic003G397900--Sobic002G075900 Sobic001G445500 Sobic001G445500 Sobic003G397900--Sobic001G445500 Sobic001G151600 Sobic001G151600 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic010G223400 Sobic010G223400 Sobic003G397900--Sobic010G223400
Octagon: transcription factors


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