Gene annotation
Transcriptome id Sobic.002G301100.1
Synonym Sb02g033160
Functional annotation PQ loop repeat domain containing protein, expressed
UniProt A0A1B6QE75
Pfam PF04193
Panther DB PTHR12226 PTHR12226:SF2
NCBI CDD KOG3211; Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization
KEGG Orthology K09660; mannose-P-dolichol utilization defect 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G07390 : Mannose-P-dolichol utilization defect 1 protein
RAP-DB (Rice) LOC_Os07g29610.1 : PQ loop repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014622
Brachypodium KQK16286
Barley -
Wheat TraesCS6A02G372000 , TraesCS6D02G356000 , TraesCS6B02G409700
Populus -


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cDNA sequences
Sobic.002G301100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
2 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
3 Sobic.006G203300 GPR89A, putative, expressed -
4 Sobic.005G090300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
5 Sobic.006G260500 expressed protein -
6 Sobic.001G399700 exonuclease, putative, expressed -
7 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
8 Sobic.001G205100 expressed protein -
9 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
11 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
12 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
13 Sobic.001G097900 expressed protein -
14 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
15 Sobic.004G112900 expressed protein -
16 Sobic.001G520300 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
17 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
18 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
19 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3


Gene co-expression network
sample Sobic002G301100 Sobic002G301100 Sobic006G106300 Sobic006G106300 Sobic002G301100--Sobic006G106300 Sobic001G474400 Sobic001G474400 Sobic002G301100--Sobic001G474400 Sobic006G203300 Sobic006G203300 Sobic002G301100--Sobic006G203300 Sobic005G090300 Sobic005G090300 Sobic002G301100--Sobic005G090300 Sobic006G260500 Sobic006G260500 Sobic002G301100--Sobic006G260500 Sobic001G399700 Sobic001G399700 Sobic002G301100--Sobic001G399700 Sobic004G096700 Sobic004G096700 Sobic002G301100--Sobic004G096700 Sobic001G205100 Sobic001G205100 Sobic002G301100--Sobic001G205100 Sobic007G173700 Sobic007G173700 Sobic002G301100--Sobic007G173700 Sobic003G409900 Sobic003G409900 Sobic006G106300--Sobic003G409900 Sobic003G021600 Sobic003G021600 Sobic006G106300--Sobic003G021600 Sobic002G398700 Sobic002G398700 Sobic006G106300--Sobic002G398700 Sobic001G097900 Sobic001G097900 Sobic006G106300--Sobic001G097900 Sobic001G015400 Sobic001G015400 Sobic006G106300--Sobic001G015400 Sobic009G254100 Sobic009G254100 Sobic006G106300--Sobic009G254100 Sobic006G106300--Sobic002G301100 Sobic006G106300--Sobic001G474400 Sobic002G364900 Sobic002G364900 Sobic006G106300--Sobic002G364900 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic003G394200 Sobic003G394200 Sobic006G203300--Sobic003G394200 Sobic003G346400 Sobic003G346400 Sobic006G203300--Sobic003G346400 Sobic010G169900 Sobic010G169900 Sobic006G203300--Sobic010G169900 Sobic004G236200 Sobic004G236200 Sobic006G203300--Sobic004G236200 Sobic001G445500 Sobic001G445500 Sobic006G203300--Sobic001G445500 Sobic004G254800 Sobic004G254800 Sobic006G203300--Sobic004G254800 Sobic001G308400 Sobic001G308400 Sobic006G203300--Sobic001G308400 Sobic006G203300--Sobic001G474400 Sobic003G036500 Sobic003G036500 Sobic006G203300--Sobic003G036500 Sobic001G056800 Sobic001G056800 Sobic005G090300--Sobic001G056800 Sobic005G062200 Sobic005G062200 Sobic005G090300--Sobic005G062200 Sobic003G114400 Sobic003G114400 Sobic005G090300--Sobic003G114400 Sobic001G263600 Sobic001G263600 Sobic005G090300--Sobic001G263600 Sobic004G223300 Sobic004G223300 Sobic005G090300--Sobic004G223300 Sobic005G090300--Sobic002G301100 Sobic002G241600 Sobic002G241600 Sobic005G090300--Sobic002G241600 Sobic008G088872 Sobic008G088872 Sobic005G090300--Sobic008G088872 Sobic003G365100 Sobic003G365100 Sobic005G090300--Sobic003G365100 Sobic006G260500--Sobic003G114400 Sobic006G077300 Sobic006G077300 Sobic006G260500--Sobic006G077300 Sobic004G241900 Sobic004G241900 Sobic006G260500--Sobic004G241900 Sobic003G209200 Sobic003G209200 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic007G005500 Sobic007G005500 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G021700 Sobic006G021700 Sobic006G260500--Sobic006G021700 Sobic001G465400 Sobic001G465400 Sobic001G399700--Sobic001G465400 Sobic003G160500 Sobic003G160500 Sobic001G399700--Sobic003G160500 Sobic002G355800 Sobic002G355800 Sobic001G399700--Sobic002G355800 Sobic001G399700--Sobic004G096700 Sobic001G399700--Sobic002G301100 Sobic003G302200 Sobic003G302200 Sobic001G399700--Sobic003G302200 Sobic003G193500 Sobic003G193500 Sobic001G399700--Sobic003G193500 Sobic001G356100 Sobic001G356100 Sobic001G399700--Sobic001G356100 Sobic004G000100 Sobic004G000100 Sobic001G399700--Sobic004G000100 Sobic002G295700 Sobic002G295700 Sobic004G096700--Sobic002G295700 Sobic004G096700--Sobic001G399700 SobicK043400 SobicK043400 Sobic004G096700--SobicK043400 Sobic004G096700--Sobic002G301100 Sobic009G054600 Sobic009G054600 Sobic004G096700--Sobic009G054600 Sobic010G133400 Sobic010G133400 Sobic004G096700--Sobic010G133400 Sobic001G501900 Sobic001G501900 Sobic004G096700--Sobic001G501900 Sobic004G096700--Sobic004G254800 Sobic010G171000 Sobic010G171000 Sobic004G096700--Sobic010G171000 Sobic008G168200 Sobic008G168200 Sobic001G205100--Sobic008G168200 Sobic008G097900 Sobic008G097900 Sobic001G205100--Sobic008G097900 Sobic001G389200 Sobic001G389200 Sobic001G205100--Sobic001G389200 Sobic003G156400 Sobic003G156400 Sobic001G205100--Sobic003G156400 Sobic001G205100--Sobic003G021600 Sobic008G171400 Sobic008G171400 Sobic001G205100--Sobic008G171400 Sobic006G060000 Sobic006G060000 Sobic001G205100--Sobic006G060000 Sobic004G130400 Sobic004G130400 Sobic001G205100--Sobic004G130400 Sobic001G205100--Sobic003G397900 Sobic002G029300 Sobic002G029300 Sobic007G173700--Sobic002G029300 Sobic007G173700--Sobic004G000100 Sobic001G023100 Sobic001G023100 Sobic007G173700--Sobic001G023100 Sobic001G193100 Sobic001G193100 Sobic007G173700--Sobic001G193100 Sobic001G161700 Sobic001G161700 Sobic007G173700--Sobic001G161700 Sobic001G061200 Sobic001G061200 Sobic007G173700--Sobic001G061200 Sobic002G141700 Sobic002G141700 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic007G173700--Sobic003G394200
Octagon: transcription factors


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