Gene annotation
Transcriptome id Sobic.001G520300.1
Synonym Sb01g048520
Functional annotation dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed
UniProt C5WZY3
Pfam PF04597
Panther DB PTHR21049 PTHR21049:SF1
NCBI CDD -
KEGG Orthology K12666; OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
Gene Ontology GO:0016021; integral component of membrane GO:0006486protein glycosylation GO:0005783endoplasmic reticulum GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity


Orthologs (automatic annotation)
TAIR AT1G76400 : Ribophorin I
RAP-DB (Rice) LOC_Os05g23600.1 : dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056764 , Zm00025a055313 , Zm00025a016429 , Zm00025a001970 , Zm00025a000398
Brachypodium KQK23851
Barley HORVU4Hr1G082730.6 , HORVU4Hr1G082730.4 , HORVU4Hr1G082730.5 , HORVU4Hr1G082730.2 , HORVU4Hr1G082730.3 , HORVU4Hr1G082730.1
Wheat TraesCS4B02G322500 , TraesCS5A02G494600 , TraesCS5A02G494600 , TraesCS4D02G318900 , TraesCS4D02G318900
Populus -


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cDNA sequences
Sobic.001G520300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
2 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
3 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
4 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
5 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
6 Sobic.003G196200 elongation factor TS family protein, expressed -
7 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
8 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
9 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
10 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
11 Sobic.001G205100 expressed protein -
12 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
13 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
14 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
15 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
16 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
17 Sobic.007G137000 lipoate protein ligase, putative, expressed -
18 Sobic.004G115800 sec20 domain containing protein, expressed K08497: protein transport protein SEC20
19 Sobic.006G041100 nuclear transport factor 2, putative, expressed -
20 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3


Gene co-expression network
sample Sobic001G520300 Sobic001G520300 Sobic002G075900 Sobic002G075900 Sobic001G520300--Sobic002G075900 Sobic001G474400 Sobic001G474400 Sobic001G520300--Sobic001G474400 Sobic003G397900 Sobic003G397900 Sobic001G520300--Sobic003G397900 Sobic001G161700 Sobic001G161700 Sobic001G520300--Sobic001G161700 Sobic001G117800 Sobic001G117800 Sobic001G520300--Sobic001G117800 Sobic003G196200 Sobic003G196200 Sobic001G520300--Sobic003G196200 Sobic002G301100 Sobic002G301100 Sobic001G520300--Sobic002G301100 Sobic001G077900 Sobic001G077900 Sobic001G520300--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G520300--Sobic001G522000 Sobic002G075900--Sobic003G397900 Sobic002G075900--Sobic001G520300 Sobic006G265600 Sobic006G265600 Sobic002G075900--Sobic006G265600 Sobic004G141800 Sobic004G141800 Sobic002G075900--Sobic004G141800 Sobic008G103300 Sobic008G103300 Sobic002G075900--Sobic008G103300 Sobic002G075900--Sobic001G474400 Sobic008G129600 Sobic008G129600 Sobic002G075900--Sobic008G129600 Sobic005G133800 Sobic005G133800 Sobic002G075900--Sobic005G133800 Sobic003G046300 Sobic003G046300 Sobic002G075900--Sobic003G046300 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600 Sobic001G455000 Sobic001G455000 Sobic003G397900--Sobic001G455000 Sobic003G397900--Sobic006G265600 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic003G397900--Sobic002G075900 Sobic001G445500 Sobic001G445500 Sobic003G397900--Sobic001G445500 Sobic001G151600 Sobic001G151600 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic003G397900--Sobic010G223400 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic003G029600 Sobic003G029600 Sobic001G117800--Sobic003G029600 Sobic001G117800--Sobic002G070600 Sobic009G118900 Sobic009G118900 Sobic001G117800--Sobic009G118900 Sobic002G340900 Sobic002G340900 Sobic001G117800--Sobic002G340900 Sobic001G117800--Sobic001G474400 Sobic001G117800--Sobic008G072200 Sobic003G314700 Sobic003G314700 Sobic001G117800--Sobic003G314700 Sobic009G120500 Sobic009G120500 Sobic001G117800--Sobic009G120500 Sobic001G437400 Sobic001G437400 Sobic001G117800--Sobic001G437400 Sobic001G387800 Sobic001G387800 Sobic003G196200--Sobic001G387800 Sobic008G102600 Sobic008G102600 Sobic003G196200--Sobic008G102600 Sobic003G196200--Sobic001G077900 Sobic004G045300 Sobic004G045300 Sobic003G196200--Sobic004G045300 Sobic003G196200--Sobic001G161700 Sobic001G178500 Sobic001G178500 Sobic003G196200--Sobic001G178500 Sobic008G110500 Sobic008G110500 Sobic003G196200--Sobic008G110500 Sobic003G196200--Sobic004G000100 Sobic001G473800 Sobic001G473800 Sobic003G196200--Sobic001G473800 Sobic006G106300 Sobic006G106300 Sobic002G301100--Sobic006G106300 Sobic002G301100--Sobic001G474400 Sobic006G203300 Sobic006G203300 Sobic002G301100--Sobic006G203300 Sobic005G090300 Sobic005G090300 Sobic002G301100--Sobic005G090300 Sobic006G260500 Sobic006G260500 Sobic002G301100--Sobic006G260500 Sobic001G399700 Sobic001G399700 Sobic002G301100--Sobic001G399700 Sobic004G096700 Sobic004G096700 Sobic002G301100--Sobic004G096700 Sobic001G205100 Sobic001G205100 Sobic002G301100--Sobic001G205100 Sobic007G173700 Sobic007G173700 Sobic002G301100--Sobic007G173700 Sobic001G443200 Sobic001G443200 Sobic001G077900--Sobic001G443200 Sobic002G141700 Sobic002G141700 Sobic001G077900--Sobic002G141700 Sobic001G077900--Sobic003G196200 Sobic001G077900--Sobic001G161700 Sobic003G009300 Sobic003G009300 Sobic001G077900--Sobic003G009300 Sobic001G077900--Sobic001G490500 Sobic006G029000 Sobic006G029000 Sobic001G077900--Sobic006G029000 Sobic001G077900--Sobic004G000100 Sobic006G232000 Sobic006G232000 Sobic001G077900--Sobic006G232000 Sobic002G367800 Sobic002G367800 Sobic001G522000--Sobic002G367800 Sobic002G423500 Sobic002G423500 Sobic001G522000--Sobic002G423500 Sobic001G522000--Sobic001G490500 Sobic006G041100 Sobic006G041100 Sobic001G522000--Sobic006G041100 Sobic003G388900 Sobic003G388900 Sobic001G522000--Sobic003G388900 Sobic003G205400 Sobic003G205400 Sobic001G522000--Sobic003G205400 Sobic002G402500 Sobic002G402500 Sobic001G522000--Sobic002G402500 Sobic001G522000--Sobic006G265600 Sobic001G522000--Sobic001G117800
Octagon: transcription factors


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