Gene annotation
Transcriptome id Sobic.007G137000.4
Synonym Sb07g021270
Functional annotation lipoate protein ligase, putative, expressed
UniProt A0A1B6PHX4
Pfam -
Panther DB PTHR12561 PTHR12561:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29010 : Biotin/lipoate A/B protein ligase family
RAP-DB (Rice) LOC_Os08g33810.1 : lipoate protein ligase, putative, expressed
MaizeGDB (Corn) Zm00025a016372
Brachypodium PNT68168 , KQJ98407 , KQJ98406
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G137000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G520300 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
2 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
3 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
4 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
5 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
6 Sobic.010G219000 tRNA pseudouridine synthase family protein, putative, expressed -
7 Sobic.005G126800 serine palmitoyltransferase 2, putative, expressed K00654: serine palmitoyltransferase
8 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
9 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
10 Sobic.005G034300 peptidyl-prolyl isomerase, putative, expressed -
11 Sobic.001G488100 OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed K14297: NUP98, ADAR2, nuclear pore complex protein Nup98-Nup96
12 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
13 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
14 Sobic.005G155700 methyltransferase, putative, expressed -
15 Sobic.002G111600 expressed protein -
16 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
17 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
18 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
19 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
20 Sobic.004G223300 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein


Gene co-expression network
sample Sobic007G137000 Sobic007G137000 Sobic001G520300 Sobic001G520300 Sobic007G137000--Sobic001G520300 Sobic002G405500 Sobic002G405500 Sobic007G137000--Sobic002G405500 Sobic006G056200 Sobic006G056200 Sobic007G137000--Sobic006G056200 Sobic008G103300 Sobic008G103300 Sobic007G137000--Sobic008G103300 Sobic002G075900 Sobic002G075900 Sobic007G137000--Sobic002G075900 Sobic010G219000 Sobic010G219000 Sobic007G137000--Sobic010G219000 Sobic005G126800 Sobic005G126800 Sobic007G137000--Sobic005G126800 Sobic008G129600 Sobic008G129600 Sobic007G137000--Sobic008G129600 Sobic001G474400 Sobic001G474400 Sobic007G137000--Sobic001G474400 Sobic001G520300--Sobic002G075900 Sobic001G520300--Sobic001G474400 Sobic003G397900 Sobic003G397900 Sobic001G520300--Sobic003G397900 Sobic001G161700 Sobic001G161700 Sobic001G520300--Sobic001G161700 Sobic001G117800 Sobic001G117800 Sobic001G520300--Sobic001G117800 Sobic003G196200 Sobic003G196200 Sobic001G520300--Sobic003G196200 Sobic002G301100 Sobic002G301100 Sobic001G520300--Sobic002G301100 Sobic001G077900 Sobic001G077900 Sobic001G520300--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G520300--Sobic001G522000 Sobic006G080400 Sobic006G080400 Sobic002G405500--Sobic006G080400 Sobic007G077900 Sobic007G077900 Sobic002G405500--Sobic007G077900 Sobic002G405500--Sobic010G219000 Sobic007G019300 Sobic007G019300 Sobic002G405500--Sobic007G019300 Sobic004G155600 Sobic004G155600 Sobic002G405500--Sobic004G155600 Sobic004G223300 Sobic004G223300 Sobic002G405500--Sobic004G223300 Sobic001G536000 Sobic001G536000 Sobic002G405500--Sobic001G536000 Sobic010G228500 Sobic010G228500 Sobic002G405500--Sobic010G228500 Sobic001G453000 Sobic001G453000 Sobic002G405500--Sobic001G453000 Sobic004G039600 Sobic004G039600 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic009G226400 Sobic009G226400 Sobic006G056200--Sobic009G226400 Sobic006G056200--Sobic008G103300 Sobic001G369000 Sobic001G369000 Sobic006G056200--Sobic001G369000 SobicK004100 SobicK004100 Sobic006G056200--SobicK004100 Sobic002G029300 Sobic002G029300 Sobic006G056200--Sobic002G029300 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic002G075900--Sobic003G397900 Sobic002G075900--Sobic001G520300 Sobic006G265600 Sobic006G265600 Sobic002G075900--Sobic006G265600 Sobic004G141800 Sobic004G141800 Sobic002G075900--Sobic004G141800 Sobic002G075900--Sobic008G103300 Sobic002G075900--Sobic001G474400 Sobic002G075900--Sobic008G129600 Sobic005G133800 Sobic005G133800 Sobic002G075900--Sobic005G133800 Sobic002G075900--Sobic003G046300 Sobic010G219000--Sobic002G405500 Sobic010G219000--Sobic010G228500 Sobic010G266500 Sobic010G266500 Sobic010G219000--Sobic010G266500 Sobic001G023800 Sobic001G023800 Sobic010G219000--Sobic001G023800 Sobic010G219000--Sobic006G200700 Sobic010G219000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic010G219000--Sobic004G277200 Sobic008G164600 Sobic008G164600 Sobic010G219000--Sobic008G164600 Sobic008G099800 Sobic008G099800 Sobic010G219000--Sobic008G099800 Sobic001G394600 Sobic001G394600 Sobic005G126800--Sobic001G394600 Sobic002G361300 Sobic002G361300 Sobic005G126800--Sobic002G361300 Sobic001G413900 Sobic001G413900 Sobic005G126800--Sobic001G413900 Sobic010G002400 Sobic010G002400 Sobic005G126800--Sobic010G002400 Sobic005G126800--Sobic007G137000 Sobic009G224000 Sobic009G224000 Sobic005G126800--Sobic009G224000 Sobic006G114500 Sobic006G114500 Sobic005G126800--Sobic006G114500 Sobic004G339100 Sobic004G339100 Sobic005G126800--Sobic004G339100 Sobic004G002400 Sobic004G002400 Sobic005G126800--Sobic004G002400 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic008G129600--Sobic006G056200 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic001G467100 Sobic001G467100 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600
Octagon: transcription factors


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