Gene annotation
Transcriptome id Sobic.005G155700.1
Synonym Sb05g021800
Functional annotation methyltransferase, putative, expressed
UniProt A0A1Z5RIQ3
Pfam PF08241
Panther DB PTHR12176 PTHR12176:SF16
NCBI CDD KOG1271; Methyltransferases
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G34360 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os11g35340.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a034109
Brachypodium PNT63471 , KQJ88200 , KQJ88199
Barley HORVU2Hr1G031830.11 , HORVU2Hr1G031830.10 , HORVU2Hr1G031830.13 , HORVU2Hr1G031830.12 , HORVU2Hr1G031830.15 , HORVU2Hr1G031830.14 , HORVU2Hr1G031830.5 , HORVU2Hr1G031830.4 , HORVU2Hr1G031830.7 , HORVU2Hr1G031830.6 , HORVU2Hr1G031830.1 , HORVU2Hr1G031830.3 , HORVU2Hr1G031830.2 , HORVU2Hr1G031830.9 , HORVU2Hr1G031830.8 , HORVU6Hr1G002720.1 , HORVU7Hr1G074750.2 , HORVU7Hr1G074750.1
Wheat TraesCS2D02G179100 , TraesCS2D02G179100 , TraesCS2B02G197900 , TraesCS2A02G171500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
2 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
3 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
4 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
5 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
6 Sobic.002G300700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
7 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
8 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
9 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
10 Sobic.010G176500 expressed protein -
11 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
12 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
13 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
14 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
15 Sobic.001G103900 signal peptide peptidase domain containing protein, expressed -
16 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
17 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
18 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
19 Sobic.010G219000 tRNA pseudouridine synthase family protein, putative, expressed -
20 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase


Gene co-expression network
sample Sobic005G155700 Sobic005G155700 Sobic001G201500 Sobic001G201500 Sobic005G155700--Sobic001G201500 Sobic010G002400 Sobic010G002400 Sobic005G155700--Sobic010G002400 Sobic006G044600 Sobic006G044600 Sobic005G155700--Sobic006G044600 Sobic010G080200 Sobic010G080200 Sobic005G155700--Sobic010G080200 Sobic010G228500 Sobic010G228500 Sobic005G155700--Sobic010G228500 Sobic002G300700 Sobic002G300700 Sobic005G155700--Sobic002G300700 Sobic004G358600 Sobic004G358600 Sobic005G155700--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G155700--Sobic003G012200 Sobic001G199100 Sobic001G199100 Sobic005G155700--Sobic001G199100 Sobic001G201400 Sobic001G201400 Sobic001G201500--Sobic001G201400 Sobic006G056600 Sobic006G056600 Sobic001G201500--Sobic006G056600 Sobic001G201500--Sobic010G002400 Sobic002G313500 Sobic002G313500 Sobic001G201500--Sobic002G313500 Sobic001G201500--Sobic005G155700 Sobic009G075800 Sobic009G075800 Sobic001G201500--Sobic009G075800 Sobic001G201500--Sobic003G012200 Sobic003G287100 Sobic003G287100 Sobic001G201500--Sobic003G287100 Sobic001G033500 Sobic001G033500 Sobic001G201500--Sobic001G033500 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic010G002400--Sobic001G201500 Sobic010G193900 Sobic010G193900 Sobic010G002400--Sobic010G193900 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic010G002400--Sobic003G012200 Sobic006G176600 Sobic006G176600 Sobic010G002400--Sobic006G176600 Sobic002G341800 Sobic002G341800 Sobic006G044600--Sobic002G341800 Sobic004G194900 Sobic004G194900 Sobic006G044600--Sobic004G194900 Sobic002G394600 Sobic002G394600 Sobic006G044600--Sobic002G394600 Sobic007G184500 Sobic007G184500 Sobic006G044600--Sobic007G184500 Sobic007G166400 Sobic007G166400 Sobic006G044600--Sobic007G166400 Sobic001G458700 Sobic001G458700 Sobic006G044600--Sobic001G458700 Sobic002G077900 Sobic002G077900 Sobic006G044600--Sobic002G077900 Sobic009G058500 Sobic009G058500 Sobic006G044600--Sobic009G058500 Sobic008G055900 Sobic008G055900 Sobic006G044600--Sobic008G055900 Sobic001G051200 Sobic001G051200 Sobic010G080200--Sobic001G051200 Sobic009G238800 Sobic009G238800 Sobic010G080200--Sobic009G238800 Sobic002G281300 Sobic002G281300 Sobic010G080200--Sobic002G281300 Sobic006G217700 Sobic006G217700 Sobic010G080200--Sobic006G217700 Sobic010G080200--Sobic005G155700 Sobic010G080200--Sobic001G033500 Sobic001G057800 Sobic001G057800 Sobic010G080200--Sobic001G057800 Sobic002G202400 Sobic002G202400 Sobic010G080200--Sobic002G202400 Sobic010G205300 Sobic010G205300 Sobic010G080200--Sobic010G205300 Sobic010G228500--Sobic002G308500 Sobic004G277200 Sobic004G277200 Sobic010G228500--Sobic004G277200 Sobic008G103300 Sobic008G103300 Sobic010G228500--Sobic008G103300 Sobic010G219000 Sobic010G219000 Sobic010G228500--Sobic010G219000 Sobic008G099800 Sobic008G099800 Sobic010G228500--Sobic008G099800 Sobic002G189400 Sobic002G189400 Sobic010G228500--Sobic002G189400 Sobic004G339100 Sobic004G339100 Sobic010G228500--Sobic004G339100 Sobic002G405500 Sobic002G405500 Sobic010G228500--Sobic002G405500 Sobic007G225100 Sobic007G225100 Sobic010G228500--Sobic007G225100 Sobic001G360200 Sobic001G360200 Sobic002G300700--Sobic001G360200 Sobic006G252700 Sobic006G252700 Sobic002G300700--Sobic006G252700 Sobic003G005200 Sobic003G005200 Sobic002G300700--Sobic003G005200 Sobic003G422900 Sobic003G422900 Sobic002G300700--Sobic003G422900 Sobic009G164000 Sobic009G164000 Sobic002G300700--Sobic009G164000 Sobic004G066200 Sobic004G066200 Sobic002G300700--Sobic004G066200 Sobic006G278700 Sobic006G278700 Sobic002G300700--Sobic006G278700 Sobic004G039600 Sobic004G039600 Sobic002G300700--Sobic004G039600 Sobic003G352200 Sobic003G352200 Sobic002G300700--Sobic003G352200 Sobic005G044800 Sobic005G044800 Sobic004G358600--Sobic005G044800 Sobic004G358600--Sobic003G012200 Sobic001G000200 Sobic001G000200 Sobic004G358600--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G358600--Sobic010G205800 Sobic004G358600--Sobic010G002400 Sobic008G004600 Sobic008G004600 Sobic004G358600--Sobic008G004600 Sobic002G361300 Sobic002G361300 Sobic004G358600--Sobic002G361300 Sobic003G372000 Sobic003G372000 Sobic004G358600--Sobic003G372000 Sobic009G199200 Sobic009G199200 Sobic004G358600--Sobic009G199200 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic001G199100--Sobic003G012200 Sobic001G199100--Sobic004G275700 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic002G226900 Sobic002G226900 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic001G199100--Sobic004G348300
Octagon: transcription factors


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