Gene annotation
Transcriptome id Sobic.001G077900.1
Synonym Sb01g007040
Functional annotation SSA2 - 2S albumin seed storage family protein precursor, putative, expressed
UniProt C5WZ99
Pfam PF09767
Panther DB PTHR12869 PTHR12869:SF0
NCBI CDD KOG3236; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47640 : -
RAP-DB (Rice) LOC_Os03g55730.1 : SSA2 - 2S albumin seed storage family protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016709 , Zm00025a008307
Brachypodium KQK13026
Barley HORVU3Hr1G085370.1 , HORVU3Hr1G085370.2 , HORVU5Hr1G097860.1 , HORVU5Hr1G097860.3 , HORVU5Hr1G097860.2 , HORVU2Hr1G039120.1 , HORVU4Hr1G087650.1
Wheat TraesCS5A02G402700 , TraesCS5D02G412700 , TraesCS5B02G407500
Populus -


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cDNA sequences
Sobic.001G077900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
2 Sobic.002G141700 unc-50, putative, expressed -
3 Sobic.003G196200 elongation factor TS family protein, expressed -
4 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
5 Sobic.003G009300 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
6 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
7 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
8 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
9 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
11 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
12 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
13 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
14 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
17 Sobic.008G102600 expressed protein -
18 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
19 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
20 Sobic.003G261800 expressed protein -


Gene co-expression network
sample Sobic001G077900 Sobic001G077900 Sobic001G443200 Sobic001G443200 Sobic001G077900--Sobic001G443200 Sobic002G141700 Sobic002G141700 Sobic001G077900--Sobic002G141700 Sobic003G196200 Sobic003G196200 Sobic001G077900--Sobic003G196200 Sobic001G161700 Sobic001G161700 Sobic001G077900--Sobic001G161700 Sobic003G009300 Sobic003G009300 Sobic001G077900--Sobic003G009300 Sobic001G490500 Sobic001G490500 Sobic001G077900--Sobic001G490500 Sobic006G029000 Sobic006G029000 Sobic001G077900--Sobic006G029000 Sobic004G000100 Sobic004G000100 Sobic001G077900--Sobic004G000100 Sobic006G232000 Sobic006G232000 Sobic001G077900--Sobic006G232000 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic004G039400 Sobic004G039400 Sobic001G443200--Sobic004G039400 Sobic001G112400 Sobic001G112400 Sobic001G443200--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G443200--Sobic004G344800 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic002G262200 Sobic002G262200 Sobic001G443200--Sobic002G262200 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic002G141700--Sobic001G443200 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic001G220900 Sobic001G220900 Sobic002G141700--Sobic001G220900 Sobic007G173700 Sobic007G173700 Sobic002G141700--Sobic007G173700 Sobic002G029300 Sobic002G029300 Sobic002G141700--Sobic002G029300 Sobic003G134800 Sobic003G134800 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic001G387800 Sobic001G387800 Sobic003G196200--Sobic001G387800 Sobic003G196200--Sobic008G102600 Sobic003G196200--Sobic001G077900 Sobic004G045300 Sobic004G045300 Sobic003G196200--Sobic004G045300 Sobic003G196200--Sobic001G161700 Sobic001G178500 Sobic001G178500 Sobic003G196200--Sobic001G178500 Sobic008G110500 Sobic008G110500 Sobic003G196200--Sobic008G110500 Sobic003G196200--Sobic004G000100 Sobic001G473800 Sobic001G473800 Sobic003G196200--Sobic001G473800 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G161700--Sobic008G072200 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic006G114400 Sobic006G114400 Sobic003G009300--Sobic006G114400 Sobic003G009300--Sobic001G077900 Sobic003G009300--Sobic006G232000 Sobic003G009300--Sobic001G220900 Sobic003G009300--Sobic001G443200 Sobic007G176200 Sobic007G176200 Sobic003G009300--Sobic007G176200 Sobic001G109300 Sobic001G109300 Sobic003G009300--Sobic001G109300 Sobic003G009300--Sobic002G141700 Sobic001G444300 Sobic001G444300 Sobic003G009300--Sobic001G444300 Sobic001G490500--Sobic001G161700 Sobic001G490500--Sobic001G220900 Sobic001G117800 Sobic001G117800 Sobic001G490500--Sobic001G117800 Sobic001G490500--Sobic002G070600 Sobic001G490500--Sobic008G072200 Sobic001G490500--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G490500--Sobic001G522000 Sobic001G338400 Sobic001G338400 Sobic001G490500--Sobic001G338400 Sobic003G029600 Sobic003G029600 Sobic001G490500--Sobic003G029600 Sobic005G111900 Sobic005G111900 Sobic006G029000--Sobic005G111900 Sobic006G029000--Sobic001G077900 Sobic009G149500 Sobic009G149500 Sobic006G029000--Sobic009G149500 Sobic006G029000--Sobic001G112400 Sobic006G029000--Sobic001G338400 Sobic006G029000--Sobic001G443200 Sobic009G089700 Sobic009G089700 Sobic006G029000--Sobic009G089700 Sobic004G181900 Sobic004G181900 Sobic006G029000--Sobic004G181900 Sobic006G029000--Sobic003G196200 Sobic004G000100--Sobic007G173700 Sobic004G000100--Sobic001G443200 Sobic001G465400 Sobic001G465400 Sobic004G000100--Sobic001G465400 Sobic004G000100--Sobic001G161700 Sobic004G000100--Sobic008G102600 Sobic004G347600 Sobic004G347600 Sobic004G000100--Sobic004G347600 Sobic004G000100--Sobic001G077900 Sobic004G000100--Sobic001G023100 Sobic004G000100--Sobic002G029300 Sobic009G238800 Sobic009G238800 Sobic006G232000--Sobic009G238800 Sobic006G232000--Sobic003G009300 Sobic006G148200 Sobic006G148200 Sobic006G232000--Sobic006G148200 Sobic006G232000--Sobic001G077900 Sobic003G270600 Sobic003G270600 Sobic006G232000--Sobic003G270600 Sobic004G010900 Sobic004G010900 Sobic006G232000--Sobic004G010900 Sobic010G261600 Sobic010G261600 Sobic006G232000--Sobic010G261600 Sobic010G064600 Sobic010G064600 Sobic006G232000--Sobic010G064600 Sobic002G294200 Sobic002G294200 Sobic006G232000--Sobic002G294200
Octagon: transcription factors


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