Gene annotation
Transcriptome id Sobic.006G029000.2
Synonym Sb06g003000
Functional annotation nicotiana lesion-inducing like, putative, expressed
UniProt A0A1Z5RBY8
Pfam PF05514
Panther DB PTHR31474 PTHR31474:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04340 : HR-like lesion-inducing protein-related
RAP-DB (Rice) LOC_Os04g10240.1 : nicotiana lesion-inducing like, putative, expressed
MaizeGDB (Corn) Zm00025a055605
Brachypodium KQJ81452 , KQJ81451
Barley HORVU2Hr1G004460.2 , HORVU2Hr1G004460.6
Wheat TraesCS2B02G040200 , TraesCS2A02G026900 , TraesCS2D02G029000
Populus -


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cDNA sequences
Sobic.006G029000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
2 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
3 Sobic.009G149500 coiled-coil domain-containing protein 47 precursor, putative, expressed -
4 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
5 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.009G089700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
8 Sobic.004G181900 expressed protein -
9 Sobic.003G196200 elongation factor TS family protein, expressed -
10 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
11 Sobic.008G085700 exocyst complex component 5, putative, expressed -
12 Sobic.007G061400 heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
13 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
14 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
15 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
17 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
18 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
19 Sobic.005G105500 expressed protein -
20 Sobic.010G205300 secreted salivary protein, putative, expressed -


Gene co-expression network
sample Sobic006G029000 Sobic006G029000 Sobic005G111900 Sobic005G111900 Sobic006G029000--Sobic005G111900 Sobic001G077900 Sobic001G077900 Sobic006G029000--Sobic001G077900 Sobic009G149500 Sobic009G149500 Sobic006G029000--Sobic009G149500 Sobic001G112400 Sobic001G112400 Sobic006G029000--Sobic001G112400 Sobic001G338400 Sobic001G338400 Sobic006G029000--Sobic001G338400 Sobic001G443200 Sobic001G443200 Sobic006G029000--Sobic001G443200 Sobic009G089700 Sobic009G089700 Sobic006G029000--Sobic009G089700 Sobic004G181900 Sobic004G181900 Sobic006G029000--Sobic004G181900 Sobic003G196200 Sobic003G196200 Sobic006G029000--Sobic003G196200 Sobic007G061400 Sobic007G061400 Sobic005G111900--Sobic007G061400 Sobic001G014800 Sobic001G014800 Sobic005G111900--Sobic001G014800 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic003G349300 Sobic003G349300 Sobic005G111900--Sobic003G349300 Sobic010G205300 Sobic010G205300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic005G111900--Sobic009G149500 Sobic001G077900--Sobic001G443200 Sobic002G141700 Sobic002G141700 Sobic001G077900--Sobic002G141700 Sobic001G077900--Sobic003G196200 Sobic001G161700 Sobic001G161700 Sobic001G077900--Sobic001G161700 Sobic003G009300 Sobic003G009300 Sobic001G077900--Sobic003G009300 Sobic001G490500 Sobic001G490500 Sobic001G077900--Sobic001G490500 Sobic001G077900--Sobic006G029000 Sobic004G000100 Sobic004G000100 Sobic001G077900--Sobic004G000100 Sobic006G232000 Sobic006G232000 Sobic001G077900--Sobic006G232000 Sobic001G206900 Sobic001G206900 Sobic009G149500--Sobic001G206900 Sobic010G020400 Sobic010G020400 Sobic009G149500--Sobic010G020400 Sobic007G188300 Sobic007G188300 Sobic009G149500--Sobic007G188300 Sobic010G223300 Sobic010G223300 Sobic009G149500--Sobic010G223300 Sobic009G149500--Sobic001G014800 Sobic009G192000 Sobic009G192000 Sobic009G149500--Sobic009G192000 Sobic009G149500--Sobic004G181900 Sobic004G010900 Sobic004G010900 Sobic009G149500--Sobic004G010900 Sobic003G338500 Sobic003G338500 Sobic009G149500--Sobic003G338500 Sobic002G262200 Sobic002G262200 Sobic001G112400--Sobic002G262200 Sobic001G112400--Sobic001G443200 Sobic005G184200 Sobic005G184200 Sobic001G112400--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G112400--Sobic001G378200 Sobic004G347600 Sobic004G347600 Sobic001G112400--Sobic004G347600 Sobic004G039400 Sobic004G039400 Sobic001G112400--Sobic004G039400 Sobic004G344800 Sobic004G344800 Sobic001G112400--Sobic004G344800 Sobic002G396700 Sobic002G396700 Sobic001G112400--Sobic002G396700 Sobic001G465400 Sobic001G465400 Sobic001G112400--Sobic001G465400 Sobic003G348800 Sobic003G348800 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G281900 Sobic001G281900 Sobic001G338400--Sobic001G281900 Sobic001G145500 Sobic001G145500 Sobic001G338400--Sobic001G145500 Sobic001G338400--Sobic004G010900 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic001G338400--Sobic006G029000 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic001G443200--Sobic004G039400 Sobic001G443200--Sobic001G112400 Sobic001G443200--Sobic004G344800 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic001G443200--Sobic002G262200 Sobic009G089700--Sobic002G396700 Sobic009G089700--Sobic006G029000 Sobic008G085700 Sobic008G085700 Sobic009G089700--Sobic008G085700 Sobic003G261800 Sobic003G261800 Sobic009G089700--Sobic003G261800 Sobic009G089700--Sobic005G111900 Sobic001G023100 Sobic001G023100 Sobic009G089700--Sobic001G023100 Sobic008G145100 Sobic008G145100 Sobic009G089700--Sobic008G145100 Sobic001G358500 Sobic001G358500 Sobic009G089700--Sobic001G358500 Sobic003G200800 Sobic003G200800 Sobic009G089700--Sobic003G200800 Sobic004G181900--Sobic001G206900 Sobic004G181900--Sobic003G349300 Sobic001G283200 Sobic001G283200 Sobic004G181900--Sobic001G283200 Sobic004G181900--Sobic010G205300 Sobic006G281800 Sobic006G281800 Sobic004G181900--Sobic006G281800 Sobic009G225000 Sobic009G225000 Sobic004G181900--Sobic009G225000 Sobic004G348900 Sobic004G348900 Sobic004G181900--Sobic004G348900 Sobic004G181900--Sobic009G149500 Sobic001G085100 Sobic001G085100 Sobic004G181900--Sobic001G085100 Sobic001G387800 Sobic001G387800 Sobic003G196200--Sobic001G387800 Sobic003G196200--Sobic008G102600 Sobic003G196200--Sobic001G077900 Sobic004G045300 Sobic004G045300 Sobic003G196200--Sobic004G045300 Sobic003G196200--Sobic001G161700 Sobic001G178500 Sobic001G178500 Sobic003G196200--Sobic001G178500 Sobic008G110500 Sobic008G110500 Sobic003G196200--Sobic008G110500 Sobic003G196200--Sobic004G000100 Sobic003G196200--Sobic001G473800
Octagon: transcription factors


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