Gene annotation
Transcriptome id Sobic.001G338400.1
Synonym Sb01g032570, GAUT11
Functional annotation glycosyl transferase 8 domain containing protein, putative, expressed
UniProt C5WWL3
Pfam PF01501
Panther DB PTHR32116 PTHR32116:SF20
NCBI CDD -
KEGG Orthology K13648; alpha-1,4-galacturonosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT1G18580 : galacturonosyltransferase 11
RAP-DB (Rice) LOC_Os03g30000.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002872 , Zm00025a029351 , Zm00025a052176 , Zm00025a057072 , Zm00025a014819
Brachypodium PNT77255 , PNT77254 , KQK21293
Barley HORVU4Hr1G048490.2 , HORVU4Hr1G048490.4 , HORVU4Hr1G048490.1 , HORVU4Hr1G048490.3
Wheat TraesCS4B02G160500 , TraesCS4D02G158500 , TraesCS4A02G147600 , TraesCS4A02G147600
Populus -


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cDNA sequences
Sobic.001G338400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.008G150300 Lg106, putative, expressed -
3 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
4 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
5 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
7 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
8 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
9 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
10 Sobic.007G161200 expressed protein -
11 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
12 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
13 Sobic.006G203100 expressed protein -
14 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
15 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
16 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
17 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
18 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
19 Sobic.002G141700 unc-50, putative, expressed -
20 Sobic.005G105500 expressed protein -


Gene co-expression network
sample Sobic001G338400 Sobic001G338400 Sobic003G348800 Sobic003G348800 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G281900 Sobic001G281900 Sobic001G338400--Sobic001G281900 Sobic001G145500 Sobic001G145500 Sobic001G338400--Sobic001G145500 Sobic004G010900 Sobic004G010900 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic003G348800--Sobic001G338400 Sobic003G348800--Sobic001G281900 Sobic003G348800--Sobic002G342500 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic004G160200 Sobic004G160200 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic003G348800--Sobic008G150300 Sobic003G170300 Sobic003G170300 Sobic008G150300--Sobic003G170300 Sobic008G150300--Sobic001G281900 Sobic008G150300--Sobic001G338400 Sobic001G458800 Sobic001G458800 Sobic008G150300--Sobic001G458800 Sobic007G161200 Sobic007G161200 Sobic008G150300--Sobic007G161200 Sobic002G410700 Sobic002G410700 Sobic008G150300--Sobic002G410700 Sobic005G105500 Sobic005G105500 Sobic008G150300--Sobic005G105500 Sobic007G159700 Sobic007G159700 Sobic008G150300--Sobic007G159700 Sobic006G211800 Sobic006G211800 Sobic008G150300--Sobic006G211800 Sobic003G330500 Sobic003G330500 Sobic001G281900--Sobic003G330500 Sobic001G281900--Sobic005G105500 Sobic001G281900--Sobic008G150300 Sobic006G252200 Sobic006G252200 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G458700 Sobic001G458700 Sobic001G281900--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G096100 Sobic001G096100 Sobic001G281900--Sobic001G096100 Sobic001G444300 Sobic001G444300 Sobic001G145500--Sobic001G444300 Sobic001G145500--Sobic005G105500 Sobic001G145500--Sobic001G338400 Sobic001G145500--Sobic001G281900 Sobic001G145500--Sobic007G176200 Sobic001G145500--Sobic004G010900 Sobic001G145500--Sobic006G252200 Sobic001G145500--Sobic003G330500 Sobic002G029300 Sobic002G029300 Sobic001G145500--Sobic002G029300 Sobic001G206900 Sobic001G206900 Sobic004G010900--Sobic001G206900 Sobic004G010900--Sobic001G458700 Sobic004G082900 Sobic004G082900 Sobic004G010900--Sobic004G082900 Sobic004G010900--Sobic006G252200 Sobic010G205300 Sobic010G205300 Sobic004G010900--Sobic010G205300 Sobic003G261400 Sobic003G261400 Sobic004G010900--Sobic003G261400 Sobic004G010900--Sobic001G338400 Sobic001G283200 Sobic001G283200 Sobic004G010900--Sobic001G283200 Sobic003G349300 Sobic003G349300 Sobic004G010900--Sobic003G349300 Sobic001G161700 Sobic001G161700 Sobic001G490500--Sobic001G161700 Sobic001G490500--Sobic001G220900 Sobic001G117800 Sobic001G117800 Sobic001G490500--Sobic001G117800 Sobic002G070600 Sobic002G070600 Sobic001G490500--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G490500--Sobic008G072200 Sobic001G077900 Sobic001G077900 Sobic001G490500--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G490500--Sobic001G522000 Sobic001G490500--Sobic001G338400 Sobic003G029600 Sobic003G029600 Sobic001G490500--Sobic003G029600 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic001G230100--Sobic003G348800 Sobic001G007600 Sobic001G007600 Sobic001G230100--Sobic001G007600 Sobic008G088830 Sobic008G088830 Sobic001G230100--Sobic008G088830 Sobic009G229300 Sobic009G229300 Sobic001G230100--Sobic009G229300 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic001G230100--Sobic004G082900 Sobic002G342500--Sobic001G338400 Sobic005G074100 Sobic005G074100 Sobic002G342500--Sobic005G074100 Sobic002G342500--Sobic001G145500 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic005G111900 Sobic005G111900 Sobic006G029000--Sobic005G111900 Sobic006G029000--Sobic001G077900 Sobic009G149500 Sobic009G149500 Sobic006G029000--Sobic009G149500 Sobic001G112400 Sobic001G112400 Sobic006G029000--Sobic001G112400 Sobic006G029000--Sobic001G338400 Sobic001G443200 Sobic001G443200 Sobic006G029000--Sobic001G443200 Sobic009G089700 Sobic009G089700 Sobic006G029000--Sobic009G089700 Sobic004G181900 Sobic004G181900 Sobic006G029000--Sobic004G181900 Sobic003G196200 Sobic003G196200 Sobic006G029000--Sobic003G196200
Octagon: transcription factors


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