Gene annotation
Transcriptome id Sobic.002G342500.1
Synonym
Functional annotation glycosyltransferase sugar-binding region containing DXD motif, putative, expressed
UniProt C5XBL2
Pfam PF04488 PF04572
Panther DB PTHR12042 PTHR12042:SF13
NCBI CDD KOG1928; Alpha-1,4-N-acetylglucosaminyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19900 : alpha 1,4-glycosyltransferase family protein
RAP-DB (Rice) LOC_Os07g37990.1 : glycosyltransferase sugar-binding region containing DXD motif, putative, expressed
MaizeGDB (Corn) Zm00025a048423
Brachypodium KQK15678
Barley HORVU2Hr1G039570.1 , HORVU2Hr1G039570.2 , HORVU2Hr1G039570.3 , HORVU2Hr1G039570.4 , HORVU2Hr1G039570.5
Wheat TraesCS2B02G228500 , TraesCS2D02G213600 , TraesCS2A02G201200 , TraesCS2A02G201200
Populus -


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cDNA sequences
Sobic.002G342500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.005G074100 hydrolase, acting on carbon-nitrogen, putative, expressed -
3 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
4 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
5 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
6 Sobic.006G179700 Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
7 Sobic.007G013300 protein kinase family protein, putative, expressed -
8 Sobic.007G161200 expressed protein -
9 Sobic.003G053700 growth regulator related protein, putative, expressed -
10 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
11 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
12 Sobic.008G003600 PMR5, putative, expressed -
13 Sobic.008G072200 coatomer subunit delta, putative, expressed -
14 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.002G332100 expressed protein -
16 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
17 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
18 Sobic.006G203100 expressed protein -
19 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
20 Sobic.008G150300 Lg106, putative, expressed -


Gene co-expression network
sample Sobic002G342500 Sobic002G342500 Sobic001G338400 Sobic001G338400 Sobic002G342500--Sobic001G338400 Sobic005G074100 Sobic005G074100 Sobic002G342500--Sobic005G074100 Sobic001G145500 Sobic001G145500 Sobic002G342500--Sobic001G145500 Sobic003G348800 Sobic003G348800 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G281900 Sobic001G281900 Sobic001G338400--Sobic001G281900 Sobic001G338400--Sobic001G145500 Sobic004G010900 Sobic004G010900 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic005G074100--Sobic007G013300 Sobic005G074100--Sobic002G342500 Sobic005G074100--Sobic001G145500 Sobic005G074100--Sobic001G338400 Sobic002G408800 Sobic002G408800 Sobic005G074100--Sobic002G408800 Sobic004G082900 Sobic004G082900 Sobic005G074100--Sobic004G082900 Sobic002G020700 Sobic002G020700 Sobic005G074100--Sobic002G020700 Sobic001G169100 Sobic001G169100 Sobic005G074100--Sobic001G169100 Sobic005G074100--Sobic004G010900 Sobic001G444300 Sobic001G444300 Sobic001G145500--Sobic001G444300 Sobic005G105500 Sobic005G105500 Sobic001G145500--Sobic005G105500 Sobic001G145500--Sobic001G338400 Sobic001G145500--Sobic001G281900 Sobic007G176200 Sobic007G176200 Sobic001G145500--Sobic007G176200 Sobic001G145500--Sobic004G010900 Sobic006G252200 Sobic006G252200 Sobic001G145500--Sobic006G252200 Sobic003G330500 Sobic003G330500 Sobic001G145500--Sobic003G330500 Sobic002G029300 Sobic002G029300 Sobic001G145500--Sobic002G029300 Sobic003G348800--Sobic001G338400 Sobic003G348800--Sobic001G281900 Sobic003G348800--Sobic002G342500 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic004G160200 Sobic004G160200 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic003G348800--Sobic008G150300 Sobic001G322000--Sobic002G408800 Sobic003G400100 Sobic003G400100 Sobic001G322000--Sobic003G400100 Sobic001G322000--Sobic002G342500 Sobic001G261456 Sobic001G261456 Sobic001G322000--Sobic001G261456 Sobic009G214900 Sobic009G214900 Sobic001G322000--Sobic009G214900 Sobic003G126600 Sobic003G126600 Sobic001G322000--Sobic003G126600 SobicK004100 SobicK004100 Sobic001G322000--SobicK004100 Sobic004G057100 Sobic004G057100 Sobic001G322000--Sobic004G057100 Sobic007G203500 Sobic007G203500 Sobic001G322000--Sobic007G203500 Sobic010G050200 Sobic010G050200 Sobic006G179700--Sobic010G050200 Sobic006G179700--Sobic002G342500 Sobic006G177300 Sobic006G177300 Sobic006G179700--Sobic006G177300 Sobic006G038200 Sobic006G038200 Sobic006G179700--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic006G179700--Sobic010G212200 Sobic001G112700 Sobic001G112700 Sobic006G179700--Sobic001G112700 Sobic003G198500 Sobic003G198500 Sobic006G179700--Sobic003G198500 Sobic008G088830 Sobic008G088830 Sobic006G179700--Sobic008G088830 Sobic008G156300 Sobic008G156300 Sobic006G179700--Sobic008G156300 Sobic007G013300--Sobic005G074100 Sobic001G206900 Sobic001G206900 Sobic007G013300--Sobic001G206900 Sobic007G013300--Sobic001G145500 Sobic002G058700 Sobic002G058700 Sobic007G013300--Sobic002G058700 Sobic003G299000 Sobic003G299000 Sobic007G013300--Sobic003G299000 Sobic007G013300--Sobic004G010900 Sobic009G149500 Sobic009G149500 Sobic007G013300--Sobic009G149500 Sobic007G013300--Sobic004G082900 Sobic007G013300--Sobic002G342500 Sobic004G060100 Sobic004G060100 Sobic007G161200--Sobic004G060100 Sobic003G200800 Sobic003G200800 Sobic007G161200--Sobic003G200800 Sobic005G018800 Sobic005G018800 Sobic007G161200--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic008G021200 Sobic008G021200 Sobic007G161200--Sobic008G021200 Sobic001G115700 Sobic001G115700 Sobic007G161200--Sobic001G115700 Sobic007G161200--Sobic008G150300 Sobic004G283600 Sobic004G283600 Sobic007G161200--Sobic004G283600 Sobic009G125900 Sobic009G125900 Sobic003G053700--Sobic009G125900 Sobic003G053700--Sobic002G342500 Sobic009G246700 Sobic009G246700 Sobic003G053700--Sobic009G246700 Sobic001G222400 Sobic001G222400 Sobic003G053700--Sobic001G222400 Sobic003G053700--Sobic003G348800 Sobic010G090500 Sobic010G090500 Sobic003G053700--Sobic010G090500 Sobic004G265600 Sobic004G265600 Sobic003G053700--Sobic004G265600 Sobic003G254700 Sobic003G254700 Sobic003G053700--Sobic003G254700 Sobic003G053700--Sobic001G281900
Octagon: transcription factors


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